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PI0025130 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025130
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:12642639..12643281
RNA-Seq ExpressionPI0025130
SyntenyPI0025130
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.4e-1470.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.4e-1470.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

KAA0065356.1 hypothetical protein E6C27_scaffold17G00040 [Cucumis melo var. makuwa]1.3e-1569.49Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCIRSTCL
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGGQAR+ + LF  I  TC+
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCIRSTCL

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.4e-1470.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

TYK26641.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]6.3e-1570.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGGQAR+   +F  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein6.8e-1570.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

A0A5A7TZS0 Reverse transcriptase domain-containing protein6.8e-1570.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

A0A5A7VG93 Uncharacterized protein6.2e-1669.49Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCIRSTCL
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGGQAR+ + LF  I  TC+
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCIRSTCL

A0A5D3BDZ6 Zf-RVT domain-containing protein6.8e-1570.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGG+AR+   LF  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

A0A5D3DSA8 Putative non-LTR retroelement reverse transcriptase3.1e-1570.37Show/hide
Query:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI
        +ELSW+  +GIG GV RKLWRVLWCA+IYFIWNERN+RLHGGQAR+   +F  I
Subjt:  LELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTTACCAATAGATTATACCAAAGTCCCAATCCCAATACAGAGTCGACAACGAAATTCTGTGAATTTATTCCCCTGCGTAAGGGCTTCAATCCCTTTAGAGTT
ATCTTGGGTCAGGCTTAAGGGTATTGGGAATGGTGTGATGAGGAAGCTATGGCGTGTGCTATGGTGTGCTTCTATCTACTTTATCTGGAATGAGCGAAATTATCGTCTCC
ATGGTGGTCAGGCTCGTGAGGCCGATGCCCTGTTTCAGTGTATCAGGTCTACGTGTTTAGTGGTTATTATGGTTCGGGTTGTGGTTTTGAGCTTTTTTGGCTCTTGTGCC
TTAGCCTCATGCTGTGAGGTCCTTCTTGTTGTTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGTTACCAATAGATTATACCAAAGTCCCAATCCCAATACAGAGTCGACAACGAAATTCTGTGAATTTATTCCCCTGCGTAAGGGCTTCAATCCCTTTAGAGTT
ATCTTGGGTCAGGCTTAAGGGTATTGGGAATGGTGTGATGAGGAAGCTATGGCGTGTGCTATGGTGTGCTTCTATCTACTTTATCTGGAATGAGCGAAATTATCGTCTCC
ATGGTGGTCAGGCTCGTGAGGCCGATGCCCTGTTTCAGTGTATCAGGTCTACGTGTTTAGTGGTTATTATGGTTCGGGTTGTGGTTTTGAGCTTTTTTGGCTCTTGTGCC
TTAGCCTCATGCTGTGAGGTCCTTCTTGTTGTTGTATAA
Protein sequenceShow/hide protein sequence
MGRLPIDYTKVPIPIQSRQRNSVNLFPCVRASIPLELSWVRLKGIGNGVMRKLWRVLWCASIYFIWNERNYRLHGGQAREADALFQCIRSTCLVVIMVRVVVLSFFGSCA
LASCCEVLLVVV