CuGenDBv2

Gene ID	PI0025131
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	chromosome transmission fidelity protein 8 homolog
Genome location	chr09:4332907..4334920
RNA-Seq Expression	PI0025131
Synteny	PI0025131
Gene Ontology terms	GO:0007064 - mitotic sister chromatid cohesion (biological process) GO:0031390 - Ctf18 RFC-like complex (cellular component)
InterPro domains	IPR018607 - Chromosome transmission fidelity protein 8

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055164.1 hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa]

2.0e-65

92.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQ  D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSR SG+AV GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

XP_004143632.1 putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus]

1.3e-67

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQ  DTKS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSR SG+AVTGQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

XP_008467231.1 PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo]

1.0e-64

92.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQ  D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSR SG+AV GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

XP_023551664.1 putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]

1.1e-60

86.43

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DRLQ LEIG+LCRPSAQEVYTFTVGYHELTGSKV LKKPLLVLKK + VDEDQ  DTKSA AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKPQP VKERSR SG+AVTGQ T
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

XP_038906846.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]

1.1e-66

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKV LKKPLLVLKK RSVDEDQ  D KSANAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSR SG+AVTGQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPT4 Uncharacterized protein

6.1e-68

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQ  DTKS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSR SG+AVTGQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

A0A1S3CT18 Uncharacterized protein

4.8e-65

92.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQ  D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSR SG+AV GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

A0A5A7UJ36 Uncharacterized protein

9.7e-66

92.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQ  D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSR SG+AV GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

A0A5D3BQB7 Uncharacterized protein

4.8e-65

92.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQ  D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSR SG+AV GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

A0A6J1I4S6 Uncharacterized protein

1.2e-60

85.71

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DR Q LEIG+LCRPSAQEVYTFTVGYHELTGSKV LKKPLLVLKK + VDEDQ  DTKSA AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT
        GIIRQR LFKTRPKALISKPQP VKERSR SG+AVTGQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRGSGTAVTGQTT

SwissProt top hits

e value

%identity

Alignment

P0C6T1 Chromosome transmission fidelity protein 8 homolog

4.9e-06

32.04

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Query:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG13 Chromosome transmission fidelity protein 8 homolog

1.3e-06

33.01

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Query:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K    D+D     +       V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG15 Chromosome transmission fidelity protein 8 homolog

1.3e-06

32.04

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Query:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

Q54JL4 Putative uncharacterized protein DDB_G0287975

6.2e-09

33.33

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILC-RPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVDEDQ
        MQI +K     T   EW +++LQG +E    +   L+N  +GIL  +P+ ++ ++F +G   L G +V LKKPLLV+KK++             +VD   
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILC-RPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVDEDQ

Query:  CRDT-KSANAELEVIGIIRQRILFKTRPKALI
         +D  K    E  + GI   +I F TRP   I
Subjt:  CRDT-KSANAELEVIGIIRQRILFKTRPKALI

Q65ZA6 Chromosome transmission fidelity protein 8

1.1e-05

38.71

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Query:  VVEPQSTFQDRLQNLEIG----ILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRP
        +VE Q+T + +  +L IG    I  + S ++  T TVG   + G   SLKKPL VL+KT +   D      S + EL+   IIR+RI F +RP
Subjt:  VVEPQSTFQDRLQNLEIG----ILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFKTRP

Arabidopsis top hits

e value

%identity

Alignment

AT5G52220.1 CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

7.9e-36

63.87

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  +QNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  +      ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

AT5G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607).

7.9e-36

63.87

Show/hide

Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  +QNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  +      ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCCTTCA
AAACCTCGAAATCGGCATTCTATGTCGACCCTCCGCTCAGGAAGTGTATACTTTTACAGTAGGATACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGT
TAGTGTTGAAGAAAACGAGGTCAGTGGATGAGGATCAATGTAGAGATACTAAATCGGCTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGGATTCTGTTTAAG
ACCAGACCAAAGGCCCTCATATCCAAACCACAGCCATTGGTTAAGGAAAGATCCCGGGGTTCAGGAACTGCAGTGACAGGCCAAACAACATGA

mRNA sequence

Show/hide mRNA sequence

AAACAGTGTCAAAGTTCTTTCCAAAAGAGCGGGAAGAGCTCTCTTATTTCCCGCCATTTTCCATCTTCTTCTCATCGGAGCTTCACAATTCGTTTTTCTTTTTCTCTCAA
AGCTGAGGATTCTTAAATAGGAAGCCATAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTAG
TTGAACCTCAATCCACCTTCCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGACCCTCCGCTCAGGAAGTGTATACTTTTACAGTAGGATACCATGAGCTG
ACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTAGTGTTGAAGAAAACGAGGTCAGTGGATGAGGATCAATGTAGAGATACTAAATCGGCTAATGCAGAGTTGGAAGT
GATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGACCAAAGGCCCTCATATCCAAACCACAGCCATTGGTTAAGGAAAGATCCCGGGGTTCAGGAACTGCAGTGA
CAGGCCAAACAACATGAGTTCTGTTGTAAAGGTGAAATGAAATCCATCCATATTTTTGCTTGGATAGATTCTATCTCAAAGAAGGAATGAAATTATATATTCATTCACTC
ATTGTCATATATTTATTTTCTCAACTTGAAAGAAGAAAATCTTATCAATCTTAGTCCCAAGAATACTGTGATAAGTTATTTTCCAACTTTACACTTAATATAAG

Protein sequence

Show/hide protein sequence

MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQCRDTKSANAELEVIGIIRQRILFK
TRPKALISKPQPLVKERSRGSGTAVTGQTT

PI0025131 (gene) of Melon (PI 482460) v1 genome