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PI0025134 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025134
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:11824071..11824672
RNA-Seq ExpressionPI0025134
SyntenyPI0025134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4555.56Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        M GP+CS FGWND  KCI+AE+E+F+NWV SH  AK LLNK F H++   YVFGKDRATG RAE F D+GLN P G+E F VD   DT+   MYSQGL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVV
        SPD++ G R  +  EGR  SSGSKRKR GQ   + ++++ A+++ N+QL  IA+   LQRQD    R +VV
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVV

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-4554.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+ E+ELF++WV SH  AK LLNK F+H++   YVFGKDRATG RAE FTD+G N P G++ F  D   DT    MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSKRKR G    + +I+  A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]5.2e-4754.6Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+AE+E+F++WV SH AAK LLNK F H++   YVF KD ATG RAE F DVG N P G++ F  +   DT+   MYS+GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPD++ G+R  R  EGR  SSGSK+KRGG T+ + +I++ A+++ N+QL  IA+   LQRQD    R +VV QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-4554.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MR P+CSGFGWND  KCIIAE+E+F++WV SH AAK LLNK F+H++   YVFGKDRATG RAE F D+G N P G++ F  D   DT+ P MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSK KR G    + +I++ A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4554.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+ E+ELF++WV SH AAK LLNK F+H++   YVFGKDRATG RAE F D+G N P G++    D   DT+ P MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSKRKR G    + +I++ A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein6.2e-4655.56Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        M GP+CS FGWND  KCI+AE+E+F+NWV SH  AK LLNK F H++   YVFGKDRATG RAE F D+GLN P G+E F VD   DT+   MYSQGL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVV
        SPD++ G R  +  EGR  SSGSKRKR GQ   + ++++ A+++ N+QL  IA+   LQRQD    R +VV
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVV

A0A5A7TZA5 Retrotransposon protein2.5e-4754.6Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+AE+E+F++WV SH AAK LLNK F H++   YVF KD ATG RAE F DVG N P G++ F  +   DT+   MYS+GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPD++ G+R  R  EGR  SSGSK+KRGG T+ + +I++ A+++ N+QL  IA+   LQRQD    R +VV QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

A0A5A7U098 Retrotransposon protein2.4e-4554.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+ E+ELF++WV SH  AK LLNK F+H++   YVFGKDRATG RAE FTD+G N P G++ F  D   DT    MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSKRKR G    + +I+  A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

A0A5A7U4M2 Retrotransposon protein2.4e-4554.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MR P+CSGFGWND  KCIIAE+E+F++WV SH AAK LLNK F+H++   YVFGKDRATG RAE F D+G N P G++ F  D   DT+ P MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSK KR G    + +I++ A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

A0A5D3C1M0 Retrotransposon protein6.2e-4654.02Show/hide
Query:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM
        MRGP+CSGFGWND  KCI+ E+ELF++WV SH AAK LLNK F+H++   YVFGKDRATG RAE F D+G N P G++    D   DT+ P MYS GL+M
Subjt:  MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDM

Query:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL
        SPDD+  +R  R  E R  SSGSKRKR G    + +I++ A+++ N+QL  IA+   LQRQD    R ++V QL
Subjt:  SPDDIAGSRPGRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGGGCCGTCGTGTAGTGGGTTTGGTTGGAACGATGGGGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGAAAATTGGGTGAACAGTCATCTTGCTGCGAAAGA
CCTCCTAAACAAGCCATTTCTCCATTTCAACAACCAGTGCTACGTATTTGGGAAGGATCGTGCGACGGGAGCTCGTGCGGAGATATTCACCGATGTCGGGTTGAATGTGC
CTGAAGGGTTTGAGGGATTTCTCGTTGATTATGGCCACGATACGGAGATCCCTATGATGTACAGTCAGGGACTAGACATGTCGCCTGATGACATTGCGGGCTCACGACCC
GGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGGAAGCGGGGAGGCCAGACAGTACAGACTGTGGAGATCATTCAGAATGCAATGGACTTCGCCAATGA
CCAGTTGAAGGCCATTGCAAAGTCGCTGAATTTACAACGTCAAGATGAATGTGCCGCTCGTGACAAAGTCGTTAACCAGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCGGGCCGTCGTGTAGTGGGTTTGGTTGGAACGATGGGGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGAAAATTGGGTGAACAGTCATCTTGCTGCGAAAGA
CCTCCTAAACAAGCCATTTCTCCATTTCAACAACCAGTGCTACGTATTTGGGAAGGATCGTGCGACGGGAGCTCGTGCGGAGATATTCACCGATGTCGGGTTGAATGTGC
CTGAAGGGTTTGAGGGATTTCTCGTTGATTATGGCCACGATACGGAGATCCCTATGATGTACAGTCAGGGACTAGACATGTCGCCTGATGACATTGCGGGCTCACGACCC
GGTCGCTCGATGGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGGAAGCGGGGAGGCCAGACAGTACAGACTGTGGAGATCATTCAGAATGCAATGGACTTCGCCAATGA
CCAGTTGAAGGCCATTGCAAAGTCGCTGAATTTACAACGTCAAGATGAATGTGCCGCTCGTGACAAAGTCGTTAACCAGCTGTAG
Protein sequenceShow/hide protein sequence
MRGPSCSGFGWNDGVKCIIAERELFENWVNSHLAAKDLLNKPFLHFNNQCYVFGKDRATGARAEIFTDVGLNVPEGFEGFLVDYGHDTEIPMMYSQGLDMSPDDIAGSRP
GRSMEGRTGSSGSKRKRGGQTVQTVEIIQNAMDFANDQLKAIAKSLNLQRQDECAARDKVVNQL