; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025174 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025174
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr06:14527700..14529189
RNA-Seq ExpressionPI0025174
SyntenyPI0025174
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025369.1 uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa]1.8e-12655.92Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREE-TIHNFP-RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLI
        MTRSSN +  +FEDLNREVRRIRRERREE +IHN   ++P+  LEP+L+    PNL R N+G+VREKTLREL+EPDEDQRPLCIVIP TTQPFELK GLI
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREE-TIHNFP-RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLI

Query:  HLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG--
        HLL I+K S GED HKH KDFHMVC SMR H +SEEQLNLRAFPF LTD AKRWLYYLEP  ITTW SLKKKF+EKFFPASRANNIRKEIYG  + FG  
Subjt:  HLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG--

Query:  ------------------------------SLCLNTGK---DAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLL
                                      S  L++ +   D AAGGALADKT  E RELISRM ENSQ+FGNR SELDNSLTKEVS             
Subjt:  ------------------------------SLCLNTGK---DAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLL

Query:  TSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQ
                +KV KCGVCGLVGHPNDK P+++E+ N++++YDP                                                       MKQ
Subjt:  TSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQ

Query:  QMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP
        Q++ +T AISK+EGKGKLLAQ DHANVSAISLRSGKIL TP + E+KVTS P+ L + +E KEEK+ET+  PS+SK  KS + D++PYIP
Subjt:  QMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.9e-17066.46Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG
        MTRSSN E  +FEDLN+EVRRIRRERREE  +N P    ++P+  LEP+L+    PNL R NMG+VREKT+R+L E DEDQRPLCIVI  TTQPFELKP 
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG

Query:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG
        LIHLLPI+K + GEDPHKH KDFHMVCDSMR HG+SEEQLNLRAFPFSLTD AKRWLYYLEPGSITTWGSLKKKF+EKFFPASR NNIRKEIYG  + FG
Subjt:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG

Query:  -----------SLCLN------------------------TGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTT
                    LC N                           DAAAGGALA+K PTEARELISRM +NSQ FGNR SEL+NSLTKEVSELK QMLNMTT
Subjt:  -----------SLCLN------------------------TGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTT

Query:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEM
        LLTSFVQG  +KV KC VCGLVGHPNDK P+++EE N+++KYDP+SNTYN GWRDNP LRW NDNQ+ +QA ++S+NQ TNL+D++KA  TNT+SFQ EM
Subjt:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEM

Query:  KQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETP-LSEEKVTSTPILLENTDEKKEEKLETS-SLPSSSKGKSHILDYSPYIP
        KQQM+ +T  ISK++GKGKL AQP+HANVS ISLRSGKIL+TP   E+KVTS P+ L + +E KEEK+ET+ SL +    KS + D++PYIP
Subjt:  KQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETP-LSEEKVTSTPILLENTDEKKEEKLETS-SLPSSSKGKSHILDYSPYIP

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.5e-12968.38Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTLREL EPDEDQRPLC+VIPPTTQPFELK GLIHLLPI+K S GEDP+KH KDFHMVCDSMR HG+SEEQLNLRAFPFSLTD  KRWLYYLEP
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLN
                                                      DA AG ALADKTPT+A ELISRM ENSQ+FGNR  ELDNSLTKEVSELK QMLN
Subjt:  GSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLN

Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH NTYN+ WRDNPNLRW NDNQ+ +QA S+S+NQGTNL+D++KA  TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQ

Query:  NEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLSEEK
         EMKQQM+ +T AISK++GKGKLLAQP+H NVSAI LRSGKIL+TP ++EK
Subjt:  NEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLSEEK

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-14163.1Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG
        MTRSSN E  +FEDLNREVRRIRRERREE  ++ P    ++P+  LEP+L+    PNL R NM +VREKTLREL+E DE+QRPLCIVIPPTTQPFELKPG
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG

Query:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG
        LIHLLPI+K S GEDPHKH KDFHMV DSMR HG+SEEQLNLRAF F L                                  R N +            
Subjt:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG

Query:  SLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVE
                DAA G ALADKTPTEARELISRM +N Q+FGNR SE DNSLTKEVSELK QMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+K P+++E
Subjt:  SLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVE

Query:  EANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISL
        + N++R+YDPHSNTYN+GWRDNPNLRW NDNQ+ +QA S+S+NQGTNLED++KA  TNT+SFQ EMKQQM+ +T AISK++GKGKL AQ DHANVSAISL
Subjt:  EANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISL

Query:  RSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP
        RSGKIL+TP + E+KVTS P+ L + +E KEEK+ET+  PS+SK  KS + D++PYIP
Subjt:  RSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP

TYK04216.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.1e-13160.37Show/hide
Query:  RREETIHN-FPRDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCD
        R E  I N + + P+  LEP+L+    PNL R NMG+VREK LREL EPDEDQRPLCI+IPPTTQPFELK GLIHLLPI+K S GEDPHKH KDF+MVCD
Subjt:  RREETIHN-FPRDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCD

Query:  SMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELI
        SMRLHG+S+EQLNLRAFPFSL D AKRWLYYLEPGSITTW                                        DAAAGGALADKTP EARELI
Subjt:  SMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELI

Query:  SRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRN
        SRMTE SQ+FGNR SELDNSLTK                             CGVCGLVGHPNDK P+++ + N+++KYDPH NTYN+GWRDNPNLRW N
Subjt:  SRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRN

Query:  DNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILET-PLSEEKVTSTPILLENTDEK
        DNQ+ +QA  +S+NQGTNLED++KA  TNT+SFQ EMKQQM+ +T AISK++GKGKL  QP+HANVS ISLRSGKIL+T    E+KVTS P+ L + +E 
Subjt:  DNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILET-PLSEEKVTSTPILLENTDEK

Query:  KEEKLETSSLPSSSKG-KSHILDYSPYIP
        KEEK+ET+  PS SK  K  + D++PYIP
Subjt:  KEEKLETSSLPSSSKG-KSHILDYSPYIP

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein4.8e-17066.46Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG
        MTRSSN E  +FEDLN+EVRRIRRERREE  +N P    ++P+  LEP+L+    PNL R NMG+VREKT+R+L E DEDQRPLCIVI  TTQPFELKP 
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG

Query:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG
        LIHLLPI+K + GEDPHKH KDFHMVCDSMR HG+SEEQLNLRAFPFSLTD AKRWLYYLEPGSITTWGSLKKKF+EKFFPASR NNIRKEIYG  + FG
Subjt:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG

Query:  -----------SLCLN------------------------TGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTT
                    LC N                           DAAAGGALA+K PTEARELISRM +NSQ FGNR SEL+NSLTKEVSELK QMLNMTT
Subjt:  -----------SLCLN------------------------TGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTT

Query:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEM
        LLTSFVQG  +KV KC VCGLVGHPNDK P+++EE N+++KYDP+SNTYN GWRDNP LRW NDNQ+ +QA ++S+NQ TNL+D++KA  TNT+SFQ EM
Subjt:  LLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEM

Query:  KQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETP-LSEEKVTSTPILLENTDEKKEEKLETS-SLPSSSKGKSHILDYSPYIP
        KQQM+ +T  ISK++GKGKL AQP+HANVS ISLRSGKIL+TP   E+KVTS P+ L + +E KEEK+ET+ SL +    KS + D++PYIP
Subjt:  KQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETP-LSEEKVTSTPILLENTDEKKEEKLETS-SLPSSSKGKSHILDYSPYIP

A0A5A7V1C6 Retrotransposon gag protein4.1e-12968.38Show/hide
Query:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTLREL EPDEDQRPLC+VIPPTTQPFELK GLIHLLPI+K S GEDP+KH KDFHMVCDSMR HG+SEEQLNLRAFPFSLTD  KRWLYYLEP
Subjt:  MGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLN
                                                      DA AG ALADKTPT+A ELISRM ENSQ+FGNR  ELDNSLTKEVSELK QMLN
Subjt:  GSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLN

Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQ
        MTTLLTSFVQG  +KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH NTYN+ WRDNPNLRW NDNQ+ +QA S+S+NQGTNL+D++KA  TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQ

Query:  NEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLSEEK
         EMKQQM+ +T AISK++GKGKLLAQP+H NVSAI LRSGKIL+TP ++EK
Subjt:  NEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLSEEK

A0A5A7VQ60 Retrotransposon gag protein2.1e-14163.1Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG
        MTRSSN E  +FEDLNREVRRIRRERREE  ++ P    ++P+  LEP+L+    PNL R NM +VREKTLREL+E DE+QRPLCIVIPPTTQPFELKPG
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREETIHNFP----RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPG

Query:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG
        LIHLLPI+K S GEDPHKH KDFHMV DSMR HG+SEEQLNLRAF F L                                  R N +            
Subjt:  LIHLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG

Query:  SLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVE
                DAA G ALADKTPTEARELISRM +N Q+FGNR SE DNSLTKEVSELK QMLNM TTLLTSFVQG  +KV KCGVCGLVGH N+K P+++E
Subjt:  SLCLNTGKDAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNM-TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVE

Query:  EANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISL
        + N++R+YDPHSNTYN+GWRDNPNLRW NDNQ+ +QA S+S+NQGTNLED++KA  TNT+SFQ EMKQQM+ +T AISK++GKGKL AQ DHANVSAISL
Subjt:  EANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISL

Query:  RSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP
        RSGKIL+TP + E+KVTS P+ L + +E KEEK+ET+  PS+SK  KS + D++PYIP
Subjt:  RSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP

A0A5D3C1D3 Retrotransposon gag protein4.4e-13160.37Show/hide
Query:  RREETIHN-FPRDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCD
        R E  I N + + P+  LEP+L+    PNL R NMG+VREK LREL EPDEDQRPLCI+IPPTTQPFELK GLIHLLPI+K S GEDPHKH KDF+MVCD
Subjt:  RREETIHN-FPRDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPHKHFKDFHMVCD

Query:  SMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELI
        SMRLHG+S+EQLNLRAFPFSL D AKRWLYYLEPGSITTW                                        DAAAGGALADKTP EARELI
Subjt:  SMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEARELI

Query:  SRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRN
        SRMTE SQ+FGNR SELDNSLTK                             CGVCGLVGHPNDK P+++ + N+++KYDPH NTYN+GWRDNPNLRW N
Subjt:  SRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRN

Query:  DNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILET-PLSEEKVTSTPILLENTDEK
        DNQ+ +QA  +S+NQGTNLED++KA  TNT+SFQ EMKQQM+ +T AISK++GKGKL  QP+HANVS ISLRSGKIL+T    E+KVTS P+ L + +E 
Subjt:  DNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILET-PLSEEKVTSTPILLENTDEK

Query:  KEEKLETSSLPSSSKG-KSHILDYSPYIP
        KEEK+ET+  PS SK  K  + D++PYIP
Subjt:  KEEKLETSSLPSSSKG-KSHILDYSPYIP

A0A5D3DIP6 Retrotrans_gag domain-containing protein8.6e-12755.92Show/hide
Query:  MTRSSNQELHFFEDLNREVRRIRRERREE-TIHNFP-RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLI
        MTRSSN +  +FEDLNREVRRIRRERREE +IHN   ++P+  LEP+L+    PNL R N+G+VREKTLREL+EPDEDQRPLCIVIP TTQPFELK GLI
Subjt:  MTRSSNQELHFFEDLNREVRRIRRERREE-TIHNFP-RDPIENLEPNLE---HPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLI

Query:  HLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG--
        HLL I+K S GED HKH KDFHMVC SMR H +SEEQLNLRAFPF LTD AKRWLYYLEP  ITTW SLKKKF+EKFFPASRANNIRKEIYG  + FG  
Subjt:  HLLPIYKDSLGEDPHKHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFG--

Query:  ------------------------------SLCLNTGK---DAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLL
                                      S  L++ +   D AAGGALADKT  E RELISRM ENSQ+FGNR SELDNSLTKEVS             
Subjt:  ------------------------------SLCLNTGK---DAAAGGALADKTPTEARELISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLL

Query:  TSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQ
                +KV KCGVCGLVGHPNDK P+++E+ N++++YDP                                                       MKQ
Subjt:  TSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKAFTTNTISFQNEMKQ

Query:  QMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP
        Q++ +T AISK+EGKGKLLAQ DHANVSAISLRSGKIL TP + E+KVTS P+ L + +E KEEK+ET+  PS+SK  KS + D++PYIP
Subjt:  QMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLS-EEKVTSTPILLENTDEKKEEKLETSSLPSSSKG-KSHILDYSPYIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGGTCTTCCAACCAAGAACTTCACTTTTTCGAAGACCTAAATAGGGAAGTGCGTAGGATTAGGAGAGAAAGGAGAGAAGAAACCATTCATAATTTTCCTCGAGA
TCCAATAGAAAACCTAGAGCCTAATCTAGAGCATCCAAACCTTGATAGAGAAAACATGGGGCAAGTTAGAGAAAAAACCTTAAGAGAGCTTTCCGAGCCCGATGAGGACC
AAAGACCCCTCTGTATAGTAATTCCCCCAACCACTCAACCCTTTGAACTCAAACCCGGACTAATTCACCTATTACCAATCTATAAGGATAGTTTAGGAGAGGACCCCCAT
AAACATTTTAAGGACTTTCACATGGTTTGTGACTCTATGAGACTGCACGGAGTCTCAGAGGAGCAACTTAATTTGAGAGCCTTCCCCTTTTCTTTAACTGACACAGCCAA
AAGATGGCTTTACTATCTAGAGCCAGGGTCCATCACAACTTGGGGTAGCCTTAAGAAAAAATTCATAGAAAAATTCTTTCCCGCCTCTAGAGCAAATAATATTAGGAAAG
AGATATATGGAACAGGCAAGCTTTTTGGGAGTCTTTGTCTGAATACTGGGAAAGACGCTGCGGCAGGAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTC
ATTTCAAGGATGACAGAAAATTCACAGAACTTTGGAAATAGGACATCCGAGCTCGACAATTCATTAACTAAGGAGGTAAGTGAACTTAAATTACAAATGCTTAATATGAC
TACGCTACTAACCTCTTTTGTGCAAGGTGGATCTGTGAAGGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTACCCTGACTTAGTTGAAGAGG
CAAATGTCATTAGGAAGTACGATCCCCATAGCAACACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGAGAAACGACAACCAAAGACCCTCACAAGCAACC
TCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTTTTACTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATATGACCAA
TGCAATAAGCAAGCTAGAAGGTAAAGGCAAACTTCTGGCTCAGCCAGATCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAGATTCTGGAAACCCCTTTAAGTG
AAGAGAAGGTAACTTCTACCCCTATCCTTCTAGAAAATACAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCTAGCTCTAAAGGTAAATCTCATATT
TTAGATTATTCTCCATACATCCCTGGTTCTCAAAAATCACTTCGTAAATATGGGATTAGGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGGTCTTCCAACCAAGAACTTCACTTTTTCGAAGACCTAAATAGGGAAGTGCGTAGGATTAGGAGAGAAAGGAGAGAAGAAACCATTCATAATTTTCCTCGAGA
TCCAATAGAAAACCTAGAGCCTAATCTAGAGCATCCAAACCTTGATAGAGAAAACATGGGGCAAGTTAGAGAAAAAACCTTAAGAGAGCTTTCCGAGCCCGATGAGGACC
AAAGACCCCTCTGTATAGTAATTCCCCCAACCACTCAACCCTTTGAACTCAAACCCGGACTAATTCACCTATTACCAATCTATAAGGATAGTTTAGGAGAGGACCCCCAT
AAACATTTTAAGGACTTTCACATGGTTTGTGACTCTATGAGACTGCACGGAGTCTCAGAGGAGCAACTTAATTTGAGAGCCTTCCCCTTTTCTTTAACTGACACAGCCAA
AAGATGGCTTTACTATCTAGAGCCAGGGTCCATCACAACTTGGGGTAGCCTTAAGAAAAAATTCATAGAAAAATTCTTTCCCGCCTCTAGAGCAAATAATATTAGGAAAG
AGATATATGGAACAGGCAAGCTTTTTGGGAGTCTTTGTCTGAATACTGGGAAAGACGCTGCGGCAGGAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTC
ATTTCAAGGATGACAGAAAATTCACAGAACTTTGGAAATAGGACATCCGAGCTCGACAATTCATTAACTAAGGAGGTAAGTGAACTTAAATTACAAATGCTTAATATGAC
TACGCTACTAACCTCTTTTGTGCAAGGTGGATCTGTGAAGGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTACCCTGACTTAGTTGAAGAGG
CAAATGTCATTAGGAAGTACGATCCCCATAGCAACACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGAGAAACGACAACCAAAGACCCTCACAAGCAACC
TCCTCTTCAAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTTTTACTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATATGACCAA
TGCAATAAGCAAGCTAGAAGGTAAAGGCAAACTTCTGGCTCAGCCAGATCATGCTAATGTAAGTGCCATCTCACTTAGAAGCGGTAAGATTCTGGAAACCCCTTTAAGTG
AAGAGAAGGTAACTTCTACCCCTATCCTTCTAGAAAATACAGATGAGAAAAAGGAAGAAAAATTAGAAACTAGTTCTTTACCATCTAGCTCTAAAGGTAAATCTCATATT
TTAGATTATTCTCCATACATCCCTGGTTCTCAAAAATCACTTCGTAAATATGGGATTAGGTTCTAA
Protein sequenceShow/hide protein sequence
MTRSSNQELHFFEDLNREVRRIRRERREETIHNFPRDPIENLEPNLEHPNLDRENMGQVREKTLRELSEPDEDQRPLCIVIPPTTQPFELKPGLIHLLPIYKDSLGEDPH
KHFKDFHMVCDSMRLHGVSEEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFIEKFFPASRANNIRKEIYGTGKLFGSLCLNTGKDAAAGGALADKTPTEAREL
ISRMTENSQNFGNRTSELDNSLTKEVSELKLQMLNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDNQRPSQAT
SSSNNQGTNLEDLVKAFTTNTISFQNEMKQQMSHMTNAISKLEGKGKLLAQPDHANVSAISLRSGKILETPLSEEKVTSTPILLENTDEKKEEKLETSSLPSSSKGKSHI
LDYSPYIPGSQKSLRKYGIRF