; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025197 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025197
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:5359915..5362981
RNA-Seq ExpressionPI0025197
SyntenyPI0025197
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046553.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.4e-10847.28Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEP+V+YSSPE LQ ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S  +                                                                           
Subjt:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------

Query:  --------------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAV
                                                     +ISTEVPVTKGT+K EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA 
Subjt:  --------------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAV

Query:  PQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFK
         Q++ S PPVL YI LSRRKKGESPFAE S+NL +   EILKE+FTTPLTK++KG AK+IEK+ +EA LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFK

Query:  N-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        + KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  N-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.1e-2264.08Show/hide
Query:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND
        +P PNIMSVMVTDV TSEDRM ELEKKVN+L+KAVEERD+EIA L+NHIES DA ESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND

Query:  IRT
        I+T
Subjt:  IRT

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]5.6e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]5.6e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.3e-2058.04Show/hide
Query:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND
        +P PNIMSVMVTDV TSEDRM+ LEKKVN+ +KAVEERD+EIA L+NHIES DA ESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND

Query:  IRTVHPKEEEKH
        I+T +    + H
Subjt:  IRTVHPKEEEKH

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]5.6e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.9e-1957.8Show/hide
Query:  PNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRT
        PNIMSVMVTDV TSEDRM ELEKKVN+L+KAVEERD+ IA  +NHIES DA ESSHT T KN +KGKAI+QES      S+  + +    E++  N I+T
Subjt:  PNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRT

Query:  VHPKEEEKH
         +    + H
Subjt:  VHPKEEEKH

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]4.0e-10246.86Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  S TE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI +S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------

Query:  ------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKP
                                             +ISTEVPVTKGT+K EQ  IT+KKS + D   G++N +  T+TK +    E IA  Q++ S P
Subjt:  ------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKP

Query:  PVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDER
         VL YI LSRRK GES FAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ +EA LPE+RT EGFD K YKLMAKAGYDFTTR E K+ KIFDER
Subjt:  PVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDER

Query:  HGLSPTQRKLQKQGYFIPNSRPGLG
          LSPTQ+KLQKQGY IPNSR G+G
Subjt:  HGLSPTQRKLQKQGYFIPNSRPGLG

TrEMBL top hitse value%identityAlignment
A0A5A7TSN4 Ty3-gypsy retrotransposon protein3.1e-10847.28Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEP+V+YSSPE LQ ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI ++ E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S  +                                                                           
Subjt:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------

Query:  --------------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAV
                                                     +ISTEVPVTKGT+K EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA 
Subjt:  --------------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAV

Query:  PQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFK
         Q++ S PPVL YI LSRRKKGESPFAE S+NL +   EILKE+FTTPLTK++KG AK+IEK+ +EA LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFK

Query:  N-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        + KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  N-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

A0A5A7TZU9 Ribonuclease H2.7e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

A0A5A7TZU9 Ribonuclease H2.0e-2264.08Show/hide
Query:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND
        +P PNIMSVMVTDV TSEDRM ELEKKVN+L+KAVEERD+EIA L+NHIES DA ESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND

Query:  IRT
        I+T
Subjt:  IRT

A0A5A7TZU9 Ribonuclease H2.7e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

A0A5D3BIH8 Uncharacterized protein6.4e-2158.04Show/hide
Query:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND
        +P PNIMSVMVTDV TSEDRM+ LEKKVN+ +KAVEERD+EIA L+NHIES DA ESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKND

Query:  IRTVHPKEEEKH
        I+T +    + H
Subjt:  IRTVHPKEEEKH

A0A5D3BIH8 Uncharacterized protein2.7e-10444.03Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  STTE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPAS------------------------------------------------------------------------------

Query:  ------QR----------------------------------------------------------------------------------------RHVI
              QR                                                                                          +I
Subjt:  ------QR----------------------------------------------------------------------------------------RHVI

Query:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT
        STEVPVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YI LSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  STEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG
        PLTK++KG AK+IEK+ ++A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE K+ KIFDER  LSPTQ+KLQKQGY IPNSR G+G
Subjt:  PLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDERHGLSPTQRKLQKQGYFIPNSRPGLG

A0A5D3D1E5 Ribonuclease H9.3e-2057.8Show/hide
Query:  PNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRT
        PNIMSVMVTDV TSEDRM ELEKKVN+L+KAVEERD+ IA  +NHIES DA ESSHT T KN +KGKAI+QES      S+  + +    E++  N I+T
Subjt:  PNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRT

Query:  VHPKEEEKH
         +    + H
Subjt:  VHPKEEEKH

A0A5D3D1E5 Ribonuclease H2.0e-10246.86Show/hide
Query:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG
        +E  D  +++H       D   + +   SLIQFGSLEP+V+YSSPE LQ ND R   PKEEEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KG
Subjt:  IESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L RPR+PI LK+FFP+NFP +IVSCH  S TE+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI +S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPASQRR---------------------------------------------------------------------------

Query:  ------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKP
                                             +ISTEVPVTKGT+K EQ  IT+KKS + D   G++N +  T+TK +    E IA  Q++ S P
Subjt:  ------------------------------------HVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVPQEKASKP

Query:  PVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDER
         VL YI LSRRK GES FAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ +EA LPE+RT EGFD K YKLMAKAGYDFTTR E K+ KIFDER
Subjt:  PVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKN-KIFDER

Query:  HGLSPTQRKLQKQGYFIPNSRPGLG
          LSPTQ+KLQKQGY IPNSR G+G
Subjt:  HGLSPTQRKLQKQGYFIPNSRPGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCTATACGAGTGAAGATAGAATGATGGAGCTTGAAAAGAAGGTTAACATACTCCTGAAAGCGGTTGAAGA
AAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTAGTGACGCTGTTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGC
AGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTATTGTTGTATATTCTTCACCAGAGGTCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAA
AAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCGCTTGTACCGAAAGTATAAAAGAAA
GGGTAAGTCTCAGAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGAAT
TTTTCCCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTCAGTACAACCGAGGATGACGCTTCTCCCTCAAATTCTGCAGAAGTTAATACAATTGGGGATGAC
ACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGA
GATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAACGAAGGCATGTCATATCGACTGAAGTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGA
TCACAACAAAAAAGTCAAAGGAAGTGGATGTACTAAAGGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGACAAACGAAAGTATAGCGGTTCCT
CAAGAAAAAGCCTCAAAACCTCCTGTTTTATGTTACATTCTACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGT
CGAAATATTAAAGGAAAGTTTCACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAACGAACGA
CGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAACAAGATATTTGATGAAAGGCATGGGCTTTCT
CCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGGTTGGGTATAAGTCTTCTGAGCCGGTTCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCTATACGAGTGAAGATAGAATGATGGAGCTTGAAAAGAAGGTTAACATACTCCTGAAAGCGGTTGAAGA
AAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTAGTGACGCTGTTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGC
AGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTATTGTTGTATATTCTTCACCAGAGGTCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAA
AAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCGCTTGTACCGAAAGTATAAAAGAAA
GGGTAAGTCTCAGAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGAAT
TTTTCCCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTCAGTACAACCGAGGATGACGCTTCTCCCTCAAATTCTGCAGAAGTTAATACAATTGGGGATGAC
ACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGA
GATATTAAAAAATGATGATGTCTCGACTATTCCTGCATCACAACGAAGGCATGTCATATCGACTGAAGTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGA
TCACAACAAAAAAGTCAAAGGAAGTGGATGTACTAAAGGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGACAAACGAAAGTATAGCGGTTCCT
CAAGAAAAAGCCTCAAAACCTCCTGTTTTATGTTACATTCTACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGT
CGAAATATTAAAGGAAAGTTTCACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCCAGAAAAACGAACGA
CGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAACAAGATATTTGATGAAAGGCATGGGCTTTCT
CCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGGGTTGGGTATAAGTCTTCTGAGCCGGTTCGAATAA
Protein sequenceShow/hide protein sequence
MPPPNIMSVMVTDVYTSEDRMMELEKKVNILLKAVEERDYEIASLRNHIESSDAVESSHTYTTKNKDKGKAILQESSLIQFGSLEPIVVYSSPEVLQKNDIRTVHPKEEE
KHVENADEGWTLVTRRKKHKQNYSKKESRLYRKYKRKGKSQRRKTRKNARKFQPITKEGEELPRPRQPITLKEFFPENFPFDIVSCHAVSTTEDDASPSNSAEVNTIGDD
TSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKNDDVSTIPASQRRHVISTEVPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPTNESIAVP
QEKASKPPVLCYILLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESIEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKNKIFDERHGLS
PTQRKLQKQGYFIPNSRPGLGISLLSRFE