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PI0025208 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025208
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:29110736..29112078
RNA-Seq ExpressionPI0025208
SyntenyPI0025208
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3456108.1 reverse transcriptase [Gossypium australe]5.3e-0450Show/hide
Query:  PNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
        P+AMKI+CWN R   + RA   LR ++ +++P +VFL +TK DV+RME
Subjt:  PNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
KAA3457419.1 reverse transcriptase [Gossypium australe]6.9e-0453.33Show/hide
Query:  MKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
        MK++CWN R   S RA   LR +V +H+P VVFL +TK D +RME
Subjt:  MKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
KAA3477524.1 reverse transcriptase [Gossypium australe]5.3e-0446.94Show/hide
Query:  GALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKC
        G    APP AMKILCWN R   +      L++++V +DP +VFL +TKC
Subjt:  GALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKC
TrEMBL top hitse value%identityAlignment
A0A2N9IQP3 Uncharacterized protein5.7e-0445.45Show/hide
Query:  APPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRMECLAMQ
        APP AMKIL WN R   + RA   L  +V    P+++FL +TK DVR ME + ++
Subjt:  APPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRMECLAMQ
A0A5B6UFS8 Reverse transcriptase2.5e-0450Show/hide
Query:  PNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
        P+AMKI+CWN R   + RA   LR ++ +++P +VFL +TK DV+RME
Subjt:  PNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
A0A5B6UI00 Reverse transcriptase3.3e-0453.33Show/hide
Query:  MKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
        MK++CWN R   S RA   LR +V +H+P VVFL +TK D +RME
Subjt:  MKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRME
A0A5B6W8D4 Reverse transcriptase2.5e-0446.94Show/hide
Query:  GALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKC
        G    APP AMKILCWN R   +      L++++V +DP +VFL +TKC
Subjt:  GALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKC
A0A803QI56 Uncharacterized protein7.4e-0440Show/hide
Query:  GSRGALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRMECL
        G  G + G PP  M +L WN R   + RA   L+E+V + +P  +FL +TKCD +R+E +
Subjt:  GSRGALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRMECL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCACCATCAGCAACAGTTTTATCGGCGGAGGCTCTAGGGGAGCCCTGTTCGGAGCCCCACCAAACGCAATGAAAATCTTATGTTGGAACGCTCGGGACAGAGA
GAGCTCGAGAGCGTTCAATGACCTTCGTGAGGTTGTAGTTAAGCATGATCCTCAGGTGGTATTCCTATCCAAGACAAAGTGTGATGTGAGGCGAATGGAGTGCTTGGCGA
TGCAAGGTGAGCATGGTAAGGAAAGGAAAATGGAGAATGAACTCATTTCTAGGCATGGGGATGAAGAAAATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCACCATCAGCAACAGTTTTATCGGCGGAGGCTCTAGGGGAGCCCTGTTCGGAGCCCCACCAAACGCAATGAAAATCTTATGTTGGAACGCTCGGGACAGAGA
GAGCTCGAGAGCGTTCAATGACCTTCGTGAGGTTGTAGTTAAGCATGATCCTCAGGTGGTATTCCTATCCAAGACAAAGTGTGATGTGAGGCGAATGGAGTGCTTGGCGA
TGCAAGGTGAGCATGGTAAGGAAAGGAAAATGGAGAATGAACTCATTTCTAGGCATGGGGATGAAGAAAATGTATAA
Protein sequenceShow/hide protein sequence
MKFTISNSFIGGGSRGALFGAPPNAMKILCWNARDRESSRAFNDLREVVVKHDPQVVFLSKTKCDVRRMECLAMQGEHGKERKMENELISRHGDEENV