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PI0025223 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025223
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionmyb family transcription factor PHL5-like isoform X1
Genome locationchr04:10821738..10824728
RNA-Seq ExpressionPI0025223
SyntenyPI0025223
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048301.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]2.8e-6190.62Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFHSPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        +VSKTRIKWTE+LHQKF+NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

KAE8650941.1 hypothetical protein Csa_001106 [Cucumis sativus]1.2e-5991.41Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSS
        MKLMMNEY EFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHSPNPQEAQHQS+CSQEFDGE CSWSCEELMP N NKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        IVSKTRIKWTEELHQ+F NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

TYK10646.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]2.8e-6190.62Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFHSPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        +VSKTRIKWTE+LHQKF+NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

XP_011652834.2 myb family transcription factor PHL5 [Cucumis sativus]4.8e-8290.42Show/hide
Query:  MTTLCPYHYKKVDQKASNVPTYNILICCFYSFLPSYNYAMKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSP
        MTTLCPYHYKKVDQ ASN PTYNILICCFY  LPSY+YAMKLMMNEY EFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHSP
Subjt:  MTTLCPYHYKKVDQKASNVPTYNILICCFYSFLPSYNYAMKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSP

Query:  NPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQ
        NPQEAQHQS+CSQEFDGE CSWSCEELMP N NKKLKSSIVSKTRIKWTEELHQ+F NC+DQLGGAQ
Subjt:  NPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQ

XP_038904770.1 myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]5.2e-4477.34Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        M LMMN+ N F PLSYLDSPFHDFYVFEG QTF E ESSFASSNTND  HHFHI SSSFHS NPQE QHQSS SQE +G++CS SCEELM   NKK KS 
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        IVSKTRIKW++ELHQKF++C+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

TrEMBL top hitse value%identityAlignment
A0A0A0LEY1 Uncharacterized protein5.6e-6091.41Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSS
        MKLMMNEY EFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTND  HHF ISSSFHSPNPQEAQHQS+CSQEFDGE CSWSCEELMP N NKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMP-NHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        IVSKTRIKWTEELHQ+F NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

A0A5A7U415 Protein PHR1-LIKE 1-like1.3e-6190.62Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFHSPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        +VSKTRIKWTE+LHQKF+NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

A0A5D3CJQ9 Protein PHR1-LIKE 1-like1.3e-6190.62Show/hide
Query:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        MKLMMNEYNEFCPLSYLDSPFHDFYVFEGC+TFSEV+SSFA SN NDHQHHFHI SSSFHSPNPQ AQHQSSCSQEFDGE+CSWSCEEL PNHNKKLKSS
Subjt:  MKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHI-SSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        +VSKTRIKWTE+LHQKF+NC+DQLGGAQ
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

A0A6J1F3G0 myb family transcription factor PHL5-like isoform X11.3e-3567.97Show/hide
Query:  KLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHSPNPQ-EAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS
        +L+M++ N  C LSYL SP  DFYVFEGC+TFSE ESSF SSNT D Q H H SS +F S   Q EAQ QSSC  EF G+ CSWS EELM N NKK KS 
Subjt:  KLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHSPNPQ-EAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSS

Query:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ
        I SK RIKWTEELHQKFMNC+DQLGG Q
Subjt:  IVSKTRIKWTEELHQKFMNCIDQLGGAQ

A0A6J1J569 myb family transcription factor PHL5-like isoform X26.5e-3270.69Show/hide
Query:  LSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHSPNPQ-EAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEE
        LSYL SP  DFYVFEGC+TFSE ESSF SSNT D QHH   SS +F S   Q EAQ QSSC QE +G+ CSWS EELM N NKK KS I  K RIKWTEE
Subjt:  LSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISS-SFHSPNPQ-EAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEE

Query:  LHQKFMNCIDQLGGAQ
        LHQKFMNC+DQLGG Q
Subjt:  LHQKFMNCIDQLGGAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G04450.1 Homeodomain-like superfamily protein9.6e-0453.33Show/hide
Query:  SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ
        SS+ SK R++WT ELH+ F+  I+QLGG++
Subjt:  SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ

AT3G04450.2 Homeodomain-like superfamily protein9.6e-0453.33Show/hide
Query:  SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ
        SS+ SK R++WT ELH+ F+  I+QLGG++
Subjt:  SSIVSKTRIKWTEELHQKFMNCIDQLGGAQ

AT5G06800.1 myb-like HTH transcriptional regulator family protein8.7e-0531.71Show/hide
Query:  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGA
        +N +  H + +SS H P     +  S  S    G   + +C               V+KTRI+WT++LH+KF+ C+++LGGA
Subjt:  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGA

AT5G06800.2 myb-like HTH transcriptional regulator family protein8.7e-0531.71Show/hide
Query:  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGA
        +N +  H + +SS H P     +  S  S    G   + +C               V+KTRI+WT++LH+KF+ C+++LGGA
Subjt:  TNDHQHHFHISSSFHSPNPQEAQHQSSCSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAAAAGCCTCAAACGTTCCTACATATAACATTTTAATTTGTTGCTTCTATTCATTCCTTCCTTCATATAA
TTATGCTATGAAGTTGATGATGAATGAGTACAATGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATGTCAAACTTTTTCAG
AGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCATCAGCATCACTTTCATATCTCATCTTCTTTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAGC
TGTTCCCAAGAGTTTGATGGTGAGTACTGTTCTTGGTCATGTGAGGAGTTGATGCCAAATCACAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATG
GACAGAAGAACTTCACCAAAAGTTCATGAATTGCATCGATCAGCTCGGAGGAGCACAAAGTAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAAACAATAAGAAAGAAGAAAAAAAATTAGAAATAGTACTTCATGACAACACTATGTCCTTACCATTACAAGAAAGTGGATCAAAAAGCCTCAAACGTTCCTACATATAA
CATTTTAATTTGTTGCTTCTATTCATTCCTTCCTTCATATAATTATGCTATGAAGTTGATGATGAATGAGTACAATGAGTTTTGTCCACTCTCCTATTTGGATTCCCCAT
TTCATGATTTCTATGTCTTTGAAGGATGTCAAACTTTTTCAGAGGTTGAGTCTTCATTTGCATCCTCCAACACTAATGATCATCAGCATCACTTTCATATCTCATCTTCT
TTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAGCTGTTCCCAAGAGTTTGATGGTGAGTACTGTTCTTGGTCATGTGAGGAGTTGATGCCAAATCACAACAA
AAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACAGAAGAACTTCACCAAAAGTTCATGAATTGCATCGATCAGCTCGGAGGAGCACAAAGTAAGTAAC
GTATATTGTAAACAATCAAGATATTATGGCCATCTGAGAATTAGTAACTCGGTATTTGTTGCAAAAGTGCAGAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACT
AAAGGATTGACTCTCATCCATATAAAAAGCCATTTACAGGTACAACATTTCACTCTCAGTTTGTCATTCTTTTGATTTGGTTTTTGATCAAATTTTTTTTTTCATTTTCA
GAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGTGTATGTTCATGTTATAATCCTAAACTCTATCAAACTAGAAATGTAAACTTAACTAAAACTCTCAACA
AAACCAAACAAATAGTGATGTGTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAAAGAACTGATGCAGGGTAACCAAAACATGTAAGTTTGTGTATTTGGTTT
GCATTTACATTAACCACCATAAGAAAATGTTACAAACTTTGATTATCTTCCAAGCAGAGGGAAGCAGCTGATGGAAGCAGTGAAACAACAACTTGATGCTCAGAGTAGTT
TGAATGAACAATTGGAGGTTTGATAATCCCATCATAGAACTTATTGATTGTAATGCTCTTTTTTCGGTTAATTGTGTTGTCTTCCTAAATTCTTTAAAAAGAAAAAGAAA
ATTGAGGGGATCGTTTTTATCTCTATAAGGGGACATTTGAGGCGAAAAGTGGAGTTGTGAACCCAAAGAGTGTTATGAAATCTTAGAAAGTTATGAATACTAAGACCTAC
AGAAGAAAGAGTTGTCAAGATATAAACTTGATATTACTTAGTCATGAGACTCATAAACTCTACCCGGACAAGAAGTGGAGTTTACAAACTCTTTGACCGACTTCTTGGGC
CAAACACCTCCTAAATAGTTAAGTGAGTAAATTTTAACATCACAGTGTATTTAAACCACAAGTTTAGTAATTGTCATTTAGGGATGTCTTGGTTTGTTAGGGGTTTAGAT
TAGATTGTGTGAAGAAATGAGCAAGTTTTGGAAGCCAAGATTTATGTTTAGCTTATGTCCTGTGGTTTATAGGTTTAAAATTCATAAAAGGTTGCTACATAATCTAAGAG
GTAGGTTCACATGTTAGAGTTTACAAAACGTAGGTTTCATGTTATTTATAATTAGGAGTGATCAAGATCGATGTATCCTGACCATGCAAGTATTTTTAGAAGACAAATCC
TACCATAAGTAGCTATGGGGGAAACTATTTAGATATTAAATCCTATATATATGGCCATTATAGTTTGAGAACTAATTTTACTTGGTAGGTTTTATGTAGTAATTGAAACT
AACAAATTTGTGAACTAGAATTACATTTTGTAAAACTCGAAGCAACATAAAGTATAATAGTCTTCAGGAGCTTACGTGCAATTGGTGTGTGTGTGTGTATAAACATAAGG
GTTTACATTTAGGTTAAATAAATTTGATTATTTTAGTTTAAAAAAACCCCAATTATTACTATTTTTAAAAATAATGAAAAAAACCACAAGGACCAACAAAGCCTTGTGGC
TTCACAAAAGGTGCACGCAACATTCCTAATTCATGCCCTATTCTGTGAGTCTCGCCTTTTTAAGGTGAGCCAAAGGCGAGCCAGAGGACTTCTTAAAATATTGCGTAGGA
TAACTGAACTCGTACATCCAAAGACATTTGAAAGTTCTAATTTCATCTGATTTGTCCTTTGGACATAAAAATAATATTGAGGTTTAAGATATACTGCCGTTGATTGTTGC
TTTTTGGGTACAGGTTCAGAAGAAATTGATCTCAACCATTGAAGAACAAATGAAGCAACTGAGAGGAGTTTTAGAACTAAGAAGGAAACCTATTGTATTTAGAAAAGACT
AAGAGAGAATAAAATGGACTTTGCTTGGATCAGAAAAGTGTGTTCTTTTCCTGGCAATATCTCTCCAACCTGATTTTGCATCTCACACAAATCTTAAGCAGAATCTATTT
ATATATCTATCCTTCCATTTTGCATCTTAAACAAAAATAAGTCACATTTAAACACCAAAATAAAAAGGGTATAACAGAGATTCAAACAGAAATTCATGAGATATGATATG
ATCACACAGAGATGGT
Protein sequenceShow/hide protein sequence
MTTLCPYHYKKVDQKASNVPTYNILICCFYSFLPSYNYAMKLMMNEYNEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHQHHFHISSSFHSPNPQEAQHQSS
CSQEFDGEYCSWSCEELMPNHNKKLKSSIVSKTRIKWTEELHQKFMNCIDQLGGAQSK