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PI0025227 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025227
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:19344745..19345119
RNA-Seq ExpressionPI0025227
SyntenyPI0025227
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.1e-1645.38Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRLI G+     D EKK+GIERLKALGA  F G  +P + E  + ++EK           +V+L  FLLQ GAEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR---GIVSWSEFK
         +E  RR   G + W EFK
Subjt:  ALEGGRR---GIVSWSEFK

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.8e-1443.48Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGG----A
        S A S  P     +E++L DR+ QRLI G+     DPEKK+GIERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ G     
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGG----A

Query:  EDWWALEGGRRGIVS
        EDWW +E  RR I S
Subjt:  EDWWALEGGRRGIVS

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.6e-1543.93Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRL+ G+     DPEKK+G ERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ  AEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR
         +E  RR
Subjt:  ALEGGRR

KGN61535.1 hypothetical protein Csa_006696 [Cucumis sativus]3.2e-2155.45Show/hide
Query:  VNSTAHSINPCARRVVEDELYDRVVQRLIDGLTKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWWA
        ++S AH++NP ARR  E+ LYDR  QRLI+ L +  +K FGIER+KALGA EF GI + EE E  IR LEK           RV+L VFLL   AEDWW 
Subjt:  VNSTAHSINPCARRVVEDELYDRVVQRLIDGLTKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWWA

Query:  LEGGRRGIVS
        LE  RRGIVS
Subjt:  LEGGRRGIVS

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.1e-1744.54Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRL+ G+     DPEKK+G ERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ  AEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR---GIVSWSEFK
         +E  RR   G +SW EFK
Subjt:  ALEGGRR---GIVSWSEFK

TrEMBL top hitse value%identityAlignment
A0A0A0LI31 Uncharacterized protein1.6e-2155.45Show/hide
Query:  VNSTAHSINPCARRVVEDELYDRVVQRLIDGLTKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWWA
        ++S AH++NP ARR  E+ LYDR  QRLI+ L +  +K FGIER+KALGA EF GI + EE E  IR LEK           RV+L VFLL   AEDWW 
Subjt:  VNSTAHSINPCARRVVEDELYDRVVQRLIDGLTKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWWA

Query:  LEGGRRGIVS
        LE  RRGIVS
Subjt:  LEGGRRGIVS

A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.5e-1645.38Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRLI G+     D EKK+GIERLKALGA  F G  +P + E  + ++EK           +V+L  FLLQ GAEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR---GIVSWSEFK
         +E  RR   G + W EFK
Subjt:  ALEGGRR---GIVSWSEFK

A0A5A7T1M0 Reverse transcriptase3.7e-1543.93Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRL+ G+     DPEKK+G ERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ  AEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR
         +E  RR
Subjt:  ALEGGRR

A0A5D3BB91 Reverse transcriptase1.0e-1744.54Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW
        S A S  P     VE++L DR+ QRL+ G+     DPEKK+G ERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ  AEDWW
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGGAEDWW

Query:  ALEGGRR---GIVSWSEFK
         +E  RR   G +SW EFK
Subjt:  ALEGGRR---GIVSWSEFK

A0A5D3DES5 DNA/RNA polymerases superfamily protein1.8e-1443.48Show/hide
Query:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGG----A
        S A S  P     +E++L DR+ QRLI G+     DPEKK+GIERLKALGA  F G  +P + E+ + ++EK           +V+L  FLLQ G     
Subjt:  STAHSINPCARRVVEDELYDRVVQRLIDGL---TKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEK-----------RVDLVVFLLQGG----A

Query:  EDWWALEGGRRGIVS
        EDWW +E  RR I S
Subjt:  EDWWALEGGRRGIVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAGTCCAAAGAGCCAATAATGGTTAATTCGACAGCGCATTCTATTAATCCTTGTGCAAGGCGAGTTGTAGAAGATGAGTTGTATGATAGAGTAGTTCAGCGGTT
GATTGATGGTTTAACAAAAGATCCTGAGAAAAAGTTTGGAATAGAGCGTTTGAAGGCGTTGGGAGCGCAAGAGTTTTTTGGAATAGTAGACCCTGAGGAAACGGAGAGTT
TGATTAGGATGCTAGAAAAAAGGGTAGATTTGGTTGTTTTCTTGTTGCAAGGAGGAGCTGAAGACTGGTGGGCCTTAGAAGGAGGAAGGCGAGGAATAGTAAGTTGGTCC
GAGTTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAGTCCAAAGAGCCAATAATGGTTAATTCGACAGCGCATTCTATTAATCCTTGTGCAAGGCGAGTTGTAGAAGATGAGTTGTATGATAGAGTAGTTCAGCGGTT
GATTGATGGTTTAACAAAAGATCCTGAGAAAAAGTTTGGAATAGAGCGTTTGAAGGCGTTGGGAGCGCAAGAGTTTTTTGGAATAGTAGACCCTGAGGAAACGGAGAGTT
TGATTAGGATGCTAGAAAAAAGGGTAGATTTGGTTGTTTTCTTGTTGCAAGGAGGAGCTGAAGACTGGTGGGCCTTAGAAGGAGGAAGGCGAGGAATAGTAAGTTGGTCC
GAGTTTAAGTAA
Protein sequenceShow/hide protein sequence
MRESKEPIMVNSTAHSINPCARRVVEDELYDRVVQRLIDGLTKDPEKKFGIERLKALGAQEFFGIVDPEETESLIRMLEKRVDLVVFLLQGGAEDWWALEGGRRGIVSWS
EFK