; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025246 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025246
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein LSD1
Genome locationchr04:431595..436059
RNA-Seq ExpressionPI0025246
SyntenyPI0025246
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005768 - endosome (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR036280 - Multiheme cytochrome superfamily
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052452.1 vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. makuwa]2.6e-9199.41Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK

XP_008439499.1 PREDICTED: protein LSD1 [Cucumis melo]5.2e-9299.42Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_011658526.1 vacuolar protein sorting-associated protein 2 homolog 2 [Cucumis sativus]5.2e-9299.42Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_022925664.1 vacuolar protein sorting-associated protein 2 homolog 2-like [Cucurbita moschata]7.6e-9197.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVR+PIPVHRRNGT+SSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_023544395.1 protein LSD1-like [Cucurbita pepo subsp. pepo]2.2e-9097.08Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVR+PIPVHRRNGT+ SGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

TrEMBL top hitse value%identityAlignment
A0A0A0KJ18 Uncharacterized protein2.5e-9299.42Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A1S3AZJ7 protein LSD12.5e-9299.42Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A5A7U9M7 Vacuolar protein sorting-associated protein 2-like protein 21.3e-9199.41Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAICHYVTNVGISNVR+PIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDK

A0A6J1ECU7 vacuolar protein sorting-associated protein 2 homolog 2-like3.7e-9197.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVR+PIPVHRRNGT+SSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A6J1KY38 vacuolar protein sorting-associated protein 2 homolog 2-like3.1e-9096.49Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLIC GCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTL+FPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVR+PIPVHRRNGTISSGMPP+SSSQSQTVVVENPMSVDESGKLVSN+VVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

SwissProt top hitse value%identityAlignment
P94077 Protein LSD11.2e-6266.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

Q0J7V9 Protein LSD11.4e-4775.22Show/hide
Query:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+C+TVT+VP PGT+MAQL+CGGC TLLMY RGATSV+CSCCHTVNLA   NQVAHVNCGNCR  L++ YGA SVK
Subjt:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICHYVTNVGIS
        CA+C++VT+VG S
Subjt:  CAICHYVTNVGIS

Q2QMB3 Protein LOL22.4e-5563.31Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPS
        MQSQ+VC GCR+ILLYP GA +VCCA+C+ V+S  P PG D+A LICGGCRTLLMY R ATSVRCSCC TVNL    + +AH+NCG C+T L++PYGAPS
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPS

Query:  VKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTT
        VKCAIC+++TN G++ +R  +P +  + T  S   P++ SQ+ TVVVENPM+VD  GKLVSNVVVGVTT
Subjt:  VKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTT

Q6ASS2 Protein LOL34.4e-5762.03Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAP
        MQSQ+VC GCRS+L YP GA +VCCALC  +T+VPPP    +MA LICGGCRTLLMY R A +VRCSCC TVNL    N +AHV+CG CRTTL++PYGAP
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAP

Query:  SVKCAICHYVTNVGISNVR-IPIPVHRRNGTISSGMPPSSSS--------------QSQTVVVENPMSVDESGKLVSNVVVGVTTDK
        SVKCAICHY+TN G++ V   P P+   +G+ S   PPS SS              Q+ TVVVENPM+VDE GKLVSNVVVGVTT K
Subjt:  SVKCAICHYVTNVGISNVR-IPIPVHRRNGTISSGMPPSSSS--------------QSQTVVVENPMSVDESGKLVSNVVVGVTTDK

Q93ZB1 Protein LOL15.3e-4775.68Show/hide
Query:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+CN VT+VPPPGT+MAQL+CGGC TLLMY RGATSV+CSCCHTVNLA   NQVAHVNCGNC   L++ YGA SVK
Subjt:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICHYVTNVG
        CA+C++VT+VG
Subjt:  CAICHYVTNVG

Arabidopsis top hitse value%identityAlignment
AT4G20380.1 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.2 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.3 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.4 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.5 LSD1 zinc finger family protein8.4e-6466.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LMY RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN R+P+P +R NGT     PPS+S     SQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRIPIPVHRRNGTISSGMPPSSS-----SQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGCCAACTTGTATGCAGTGGGTGTAGGAGCATTCTTCTTTATCCAGGGGGGGCAACTAATGTATGCTGTGCATTATGCAATACAGTCACCTCAGTTCCTCCTCC
TGGAACAGATATGGCTCAACTTATATGTGGAGGTTGCAGGACGTTGCTTATGTACGCACGTGGGGCAACAAGTGTAAGATGCTCATGTTGCCATACAGTAAACCTTGCAC
CTGCTACGAACCAGGTTGCACATGTTAACTGTGGAAACTGCCGAACAACACTTGTCTTTCCATATGGAGCTCCATCTGTCAAATGTGCGATCTGTCACTATGTTACAAAT
GTTGGTATATCCAACGTGAGGATTCCCATTCCAGTGCACAGGCGTAATGGAACAATTAGCTCTGGAATGCCCCCTTCATCATCATCTCAGAGCCAAACAGTTGTAGTTGA
GAACCCTATGTCTGTTGATGAAAGTGGCAAATTGGTGAGCAATGTCGTTGTTGGTGTCACAACAGATAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGCCAACTTGTATGCAGTGGGTGTAGGAGCATTCTTCTTTATCCAGGGGGGGCAACTAATGTATGCTGTGCATTATGCAATACAGTCACCTCAGTTCCTCCTCC
TGGAACAGATATGGCTCAACTTATATGTGGAGGTTGCAGGACGTTGCTTATGTACGCACGTGGGGCAACAAGTGTAAGATGCTCATGTTGCCATACAGTAAACCTTGCAC
CTGCTACGAACCAGGTTGCACATGTTAACTGTGGAAACTGCCGAACAACACTTGTCTTTCCATATGGAGCTCCATCTGTCAAATGTGCGATCTGTCACTATGTTACAAAT
GTTGGTATATCCAACGTGAGGATTCCCATTCCAGTGCACAGGCGTAATGGAACAATTAGCTCTGGAATGCCCCCTTCATCATCATCTCAGAGCCAAACAGTTGTAGTTGA
GAACCCTATGTCTGTTGATGAAAGTGGCAAATTGGTGAGCAATGTCGTTGTTGGTGTCACAACAGATAAAAGGTAA
Protein sequenceShow/hide protein sequence
MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVKCAICHYVTN
VGISNVRIPIPVHRRNGTISSGMPPSSSSQSQTVVVENPMSVDESGKLVSNVVVGVTTDKR