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PI0025287 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025287
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionOuter membrane A domain protein
Genome locationchr01:10618325..10619348
RNA-Seq ExpressionPI0025287
SyntenyPI0025287
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3551098.1 hypothetical protein DY000_02005191 [Brassica cretica]6.5e-2842.11Show/hide
Query:  GGLFGVLAQMRRVGTHNFVSRIK---GGLLEDVAGFGPVGTRRFVPKVN---GGLSKDVAEFGPIGTRRLVPKVN---EGLSGDVAGFGPVRTRRFAPK-
        GG  G ++    +GT+ F  +     GG   DV+ FGP+GT  F PK     GG   DV+ FGP+GT    PK      G SG+V+ FGP+ T  F PK 
Subjt:  GGLFGVLAQMRRVGTHNFVSRIK---GGLLEDVAGFGPVGTRRFVPKVN---GGLSKDVAEFGPIGTRRLVPKVN---EGLSGDVAGFGPVRTRRFAPK-

Query:  -VIGGLLGDVVGFGPFGTSLLVPKN-------NGGLSGDIAGFGPVGARRVAPKVN---GGLSGDVAGFGPVGTRHFAPKVN---GGLSGDVAGFGPVGT
         +  G  GDV  FGP GT+L  PK+         G  GD++ FGP+G    +PK     GG  GDV+ FGP+GT  F PK     G + GDV+ FGP+GT
Subjt:  -VIGGLLGDVVGFGPFGTSLLVPKN-------NGGLSGDIAGFGPVGARRVAPKVN---GGLSGDVAGFGPVGTRHFAPKVN---GGLSGDVAGFGPVGT

Query:  SLLMPKNN---GGLSGDVAGFDPVGTSL
        +L  PK+    GG  GDV+ F P+GT+L
Subjt:  SLLMPKNN---GGLSGDVAGFDPVGTSL

XP_019092416.1 PREDICTED: otolin-1-like [Camelina sativa]5.3e-2244.77Show/hide
Query:  NGGLSKDVAEFGPIGTRRLVPK---VNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVVGFGPFGTSLLVP----KNNGGLSGDIAGFGPVGARRVAP---
        N G   DV+ FGP+GT   V      N+G  GDV+ FGP+ T  FAPK   G  GDV  F P GTSL  P    +   G  GD++ FGP+G    AP   
Subjt:  NGGLSKDVAEFGPIGTRRLVPK---VNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVVGFGPFGTSLLVP----KNNGGLSGDIAGFGPVGARRVAP---

Query:  KVNGGLSGDVAGFGPVGTRHFAPK---VNGGLSGDVAGFGPVGTSLLMPKN---NGGLSGDVAGFDPVGTSL
          N G  GDV+ FGP+GT  F P     N G  GDV+ FGP+GT+L +P +   N G  GDV+ F P+GT+L
Subjt:  KVNGGLSGDVAGFGPVGTRHFAPK---VNGGLSGDVAGFGPVGTSLLMPKN---NGGLSGDVAGFDPVGTSL

XP_023536219.1 collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo]5.2e-7067.34Show/hide
Query:  KGGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDV
        +GGL G +     VGT   V +++GGL  DVAGFGPVGTR F+P+ NGG+S DVA FGP+GTR  VP+ N G+SGDVAGFGPV TR F  +  GG+ GDV
Subjt:  KGGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDV

Query:  VGFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVG
         GFGP GT LLVPK  GGLSGD+AGFGPVG R + P+ NGG+SGDVAGFGPVGTR F P+ NGG+SGDVAGFGPVGT LL+P+ NGG+SGDVAGF PVG
Subjt:  VGFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVG

XP_024199882.1 collagen alpha-2(I) chain-like [Rosa chinensis]1.6e-2642.27Show/hide
Query:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRR------------LVPKVNE-GLSGDVAGFGPVRTRRF
        GG+ G L  +  VGT     R  GG+  D  G GPVGTRR     NGG+  D   FGP+GTRR            LV    + G+ GD  G GPV TRR 
Subjt:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRR------------LVPKVNE-GLSGDVAGFGPVRTRRF

Query:  APKVIGGLLGDVVGFGPFGTSLLVPKNNGGLSGDIAGFGPVGA--------RRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLL
             GG+ GD+VG GP GT     + NGG+ GD  GFGPVG           V  + +GG+  D  G G VGTR      +GG+SGD  GFG VGT   
Subjt:  APKVIGGLLGDVVGFGPFGTSLLVPKNNGGLSGDIAGFGPVGA--------RRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLL

Query:  MPKNNGGLSGDVAGFDPVGT
            N G+ GD  GF P+GT
Subjt:  MPKNNGGLSGDVAGFDPVGT

XP_038902390.1 spidroin-1-like [Benincasa hispida]1.1e-6267.17Show/hide
Query:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVV
        GGL G +      G    + +  GGL+ DV GFG  G    VPK N G   D A FGP GT R VPK N GLSGDVAGFG V T RF PKV GGL GDVV
Subjt:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVV

Query:  GFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVG
        GFGP GTS  +PK NGGLSGD+AGFGP+G   + PKVNGGLSGDVAGFG VGT HF PKVNGGLSGDVAGFGPVGTSLL+ K+NG LSGDVAGF PVG
Subjt:  GFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVG

TrEMBL top hitse value%identityAlignment
A0A140QVL5 Putative outer membrane protein A (Fragment)6.3e-1336.18Show/hide
Query:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVV
        GG+ G       +GT   V+ I GGL     G  P+G+   V  + GGL+  V    P+GT   V  +  GL+G   G  P+ T      +IGGL G V 
Subjt:  GGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVV

Query:  GFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVGT
        G  P GT   V    GGL+G   G  P+G       + GGL+G V G  P+GT      + GGL+G   G  P+GT   +    GGL+G V G +P+GT
Subjt:  GFGPFGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVGT

A0A178VJC8 Uncharacterized protein6.1e-1642.95Show/hide
Query:  NGGLSKDVAEFGPIGTRRLVP---KVNEGLSGDVAGFGPVRTRRFAPKVI---GGLLGDVVGFGPFGTSLLVP---KNNGGLSGDIAGFGPVGARRVAP-
        N G + D+A FGP+GT   VP     N+G +GD A FGP+ T  F P  +    G  GDV  FGP GT+L VP     N G +GD+A FGP+G   + P 
Subjt:  NGGLSKDVAEFGPIGTRRLVP---KVNEGLSGDVAGFGPVRTRRFAPKVI---GGLLGDVVGFGPFGTSLLVP---KNNGGLSGDIAGFGPVGARRVAP-

Query:  --KVNGGLSGDVAGFGPVGTRHFAP---KVNGGLSGDVAGFGPVGTSLL
            N G +GDVA FGP+GT  F P     N    GD A    +G +LL
Subjt:  --KVNGGLSGDVAGFGPVGTRHFAP---KVNGGLSGDVAGFGPVGTSLL

A0A654F8U0 Uncharacterized protein3.5e-1143.09Show/hide
Query:  NEGLSGDVAGFGPVRTRRFAPKVI---GGLLGDVVGFGPFGTSLLVP---KNNGGLSGDIAGFGPVGARRVAP---KVNGGLSGDVAGFGPVGTRHFAP-
        N+G +GD+A FGP+ T  F P       G  GDV  FGP GT+L VP     N G +GD+A FGP+G   + P     N G +GDVA FGP+GT  F P 
Subjt:  NEGLSGDVAGFGPVRTRRFAPKVI---GGLLGDVVGFGPFGTSLLVP---KNNGGLSGDIAGFGPVGARRVAP---KVNGGLSGDVAGFGPVGTRHFAP-

Query:  --KVNGGLSGDVAGFGPVGTSLL
            N    GD A    +G +LL
Subjt:  --KVNGGLSGDVAGFGPVGTSLL

A0A6D2JGR3 Uncharacterized protein2.0e-1137.19Show/hide
Query:  GLLEDVAGFGPVGTRRFVPKVN----GGLSKDVAEFGPIGT---RRLVPKVNEGLSGDVAGFGPVRTRRFA---PKVIGGLLGDVVGFGPFGTSLLV---
        G+  DV+  GPV T  F P ++      L  DV   GP+GT     +    N+GL GDV+  GPV T  FA         L GDV+  GP GT L +   
Subjt:  GLLEDVAGFGPVGTRRFVPKVN----GGLSKDVAEFGPIGT---RRLVPKVNEGLSGDVAGFGPVRTRRFA---PKVIGGLLGDVVGFGPFGTSLLV---

Query:  PKNNGGLSGDIAGFGPVGA---RRVAPKVNGGLSGDVAGFGPVGTRHF---APKVNGGLSGDVAGFGPVGTSL---LMPKNNGGLSGDVAGFDPVGTSL
           N GL GD++  GPVG      ++      L GDV   GP+GT  F   +   N GL GDV+  G VGT L   +       L GDV    P+GT L
Subjt:  PKNNGGLSGDIAGFGPVGA---RRVAPKVNGGLSGDVAGFGPVGTRHF---APKVNGGLSGDVAGFGPVGTSL---LMPKNNGGLSGDVAGFDPVGTSL

A0A6D2JI61 Uncharacterized protein4.9e-1338.02Show/hide
Query:  DVAGFGPVGTRRFVPKVN-GGLSKDVAEFGPIGT---RRLVPKVNEGLSGDVAGFGPVRTRRFA---PKVIGGLLGDVVGFGPFGTSL---LVPKNNGGL
        DV+  GPV T  F P    GG   DV+ FGP+GT     +    ++GL  DV+  GPV T  FA         L GDV+  GP GT L   +    N GL
Subjt:  DVAGFGPVGTRRFVPKVN-GGLSKDVAEFGPIGT---RRLVPKVNEGLSGDVAGFGPVRTRRFA---PKVIGGLLGDVVGFGPFGTSL---LVPKNNGGL

Query:  SGDIAGFGPVGA---RRVAPKVNGGLSGDVAGFGPVGTRHF---APKVNGGLSGDVAGFGPVGT---SLLMPKNNGGLSGDVAGFDPVGTSL
         GD+   GPVG      ++      L+GDV   GP+ T  F   +   N GL GDV   GPVGT   +L+       L GDV    P+GT L
Subjt:  SGDIAGFGPVGA---RRVAPKVNGGLSGDVAGFGPVGTRHF---APKVNGGLSGDVAGFGPVGT---SLLMPKNNGGLSGDVAGFDPVGTSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTACAACAAAAGGAGGTCTTTTTGGAGTTCTTGCTCAAATGAGGCGAGTTGGGACTCATAACTTTGTTTCAAGAATCAAAGGAGGACTTTTAGAAGATGTTGC
TGGATTTGGGCCAGTTGGAACGAGGCGCTTTGTTCCTAAAGTCAATGGAGGGCTTTCAAAAGATGTTGCTGAATTTGGGCCTATTGGGACGAGGCGCTTGGTGCCTAAAG
TCAATGAAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTAGGACGAGGCGCTTTGCTCCTAAAGTTATTGGAGGGCTTTTAGGAGATGTTGTTGGATTTGGGCCT
TTTGGAACAAGCCTCTTGGTACCTAAAAATAATGGAGGGCTTTCAGGAGATATTGCTGGATTTGGGCCAGTTGGGGCAAGGCGCGTTGCTCCTAAAGTCAATGGAGGGCT
TTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACAAGGCACTTTGCTCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTAGCTGGATTTGGGCCTGTTGGAACAAGCC
TCTTGATGCCTAAAAATAATGGAGGGCTTTCAGGGGATGTTGCTGGATTTGATCCGGTTGGTACAAGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTACAACAAAAGGAGGTCTTTTTGGAGTTCTTGCTCAAATGAGGCGAGTTGGGACTCATAACTTTGTTTCAAGAATCAAAGGAGGACTTTTAGAAGATGTTGC
TGGATTTGGGCCAGTTGGAACGAGGCGCTTTGTTCCTAAAGTCAATGGAGGGCTTTCAAAAGATGTTGCTGAATTTGGGCCTATTGGGACGAGGCGCTTGGTGCCTAAAG
TCAATGAAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTAGGACGAGGCGCTTTGCTCCTAAAGTTATTGGAGGGCTTTTAGGAGATGTTGTTGGATTTGGGCCT
TTTGGAACAAGCCTCTTGGTACCTAAAAATAATGGAGGGCTTTCAGGAGATATTGCTGGATTTGGGCCAGTTGGGGCAAGGCGCGTTGCTCCTAAAGTCAATGGAGGGCT
TTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACAAGGCACTTTGCTCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTAGCTGGATTTGGGCCTGTTGGAACAAGCC
TCTTGATGCCTAAAAATAATGGAGGGCTTTCAGGGGATGTTGCTGGATTTGATCCGGTTGGTACAAGTCTTTGA
Protein sequenceShow/hide protein sequence
MELTTKGGLFGVLAQMRRVGTHNFVSRIKGGLLEDVAGFGPVGTRRFVPKVNGGLSKDVAEFGPIGTRRLVPKVNEGLSGDVAGFGPVRTRRFAPKVIGGLLGDVVGFGP
FGTSLLVPKNNGGLSGDIAGFGPVGARRVAPKVNGGLSGDVAGFGPVGTRHFAPKVNGGLSGDVAGFGPVGTSLLMPKNNGGLSGDVAGFDPVGTSL