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PI0025311 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025311
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:12836390..12837767
RNA-Seq ExpressionPI0025311
SyntenyPI0025311
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]6.3e-2368Show/hide
Query:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCG   L+GHPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
KAA0050529.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.2e-2368Show/hide
Query:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCG   L+GHPNDKCP+++E+ N++RKYDP GNTYN  WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-2266.67Show/hide
Query:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTK   CGL+GHPNDKCP+++E+ N+++KYDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
KAA0056713.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-2263.64Show/hide
Query:  GGNVKVTKCGL---IGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNVSI
        G  +KVTKCG+   +GHPNDKCP+++E+ N+++KYDP GNTYN+ WRDNPNLRWGN+NQ  TQA PTS+NQ TN+ +
Subjt:  GGNVKVTKCGL---IGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNVSI
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]1.4e-2266.67Show/hide
Query:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTK   CGL+GHPNDKCP+++E+ N+++KYDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
TrEMBL top hitse value%identityAlignment
A0A5A7UAL2 Retrotransposon gag protein4.0e-2368Show/hide
Query:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCG   L+GHPNDKCP+++E+ N++RKYDP GNTYN  WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
A0A5A7UID2 Retrotransposon gag protein6.8e-2368.06Show/hide
Query:  VKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        +KVTK   CGL+GHPNDKCP+++E+ N++R+YDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  VKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
A0A5A7ULC7 Retrotransposon gag protein5.2e-2363.64Show/hide
Query:  GGNVKVTKCGL---IGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNVSI
        G  +KVTKCG+   +GHPNDKCP+++E+ N+++KYDP GNTYN+ WRDNPNLRWGN+NQ  TQA PTS+NQ TN+ +
Subjt:  GGNVKVTKCGL---IGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNVSI
A0A5D3DCG3 Retrotransposon gag protein6.8e-2366.67Show/hide
Query:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTK   CGL+GHPNDKCP+++E+ N+++KYDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTK---CGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
E5GBZ4 Retrotransposon gag protein3.0e-2368Show/hide
Query:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
        G  +KVTKCG   L+GHPNDKCP+++E+ N++RKYDP GNTYN+ WRDNPNLRWGN+NQ+ TQA PTS+NQ TN+
Subjt:  GGNVKVTKCG---LIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGTTGTCGGGGAGCGACGGTGGAAATGTGAAAGTTACCAAATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGCAAATGTCAT
TAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCAGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTCCTACTTCAA
ACAATCAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCGTTGTCGGGGAGCGACGGTGGAAATGTGAAAGTTACCAAATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGCAAATGTCAT
TAGGAAGTACGATCCCCAAGGAAATACTTACAACGCCAGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTCCTACTTCAA
ACAATCAAGCAACAAATGTCTCAATTAACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAA
Protein sequenceShow/hide protein sequence
MAPLSGSDGGNVKVTKCGLIGHPNDKCPDLVEEANVIRKYDPQGNTYNASWRDNPNLRWGNNNQQPTQATPTSNNQATNVSINKCNKQVRRQR