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PI0025328 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025328
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr04:16768481..16769098
RNA-Seq ExpressionPI0025328
SyntenyPI0025328
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]4.3e-0835.83Show/hide
Query:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL
        +ESE+ TL          L++ +DDPL K  Q+  E+A +TR P   KQ        T+ ++    +++DDE ++K+INE +++ +  G ED+FQ QA+L
Subjt:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL

Query:  QKRAMKQEKQIMDLELKIDN
        Q+  ++ +K + DLELK D+
Subjt:  QKRAMKQEKQIMDLELKIDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.9e-1155.56Show/hide
Query:  GETRAPLSSKQTENQQGNAAEENDDEE-FYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQ
        GET APL  KQ  NQQ NAA E+D+E+ ++K+I +   K +MDG +D+FQNQ  LQ+   + EKQI DLELKIDN   HHQ
Subjt:  GETRAPLSSKQTENQQGNAAEENDDEE-FYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQ

TYK23898.1 gag-pol [Cucumis melo var. makuwa]4.8e-0745.05Show/hide
Query:  EDATLAPESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQTENQQGNAAEENDDE-EFYKYINEAIAKAMMDGLEDIFQNQASLQK
        E+ATL          +E VDD L K  QI  E+ GE   P   KQT  QQ N   E+DDE +++K+I++   K MMD LEDIFQ Q+ LQ+
Subjt:  EDATLAPESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQTENQQGNAAEENDDE-EFYKYINEAIAKAMMDGLEDIFQNQASLQK

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]9.6e-0848.31Show/hide
Query:  DEEFYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQSQHDQLASKIASLKEQNKAIVNLIKKASLRSDR
        D+E++K+I     K M DG EDIFQ QA+LQ+  M+ +KQ+ +LEL+IDN    HQ+Q D +   I SLK QN+A+  LIK+AS +++R
Subjt:  DEEFYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQSQHDQLASKIASLKEQNKAIVNLIKKASLRSDR

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]4.3e-0835.83Show/hide
Query:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL
        +ESE+ TL          L++ +DDPL K  Q+  E+A +TR P   KQ        T+ ++    +++DDE ++K+INE +++ +  G ED+FQ QA+L
Subjt:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL

Query:  QKRAMKQEKQIMDLELKIDN
        Q+  ++ +K + DLELK D+
Subjt:  QKRAMKQEKQIMDLELKIDN

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein2.1e-0835.83Show/hide
Query:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL
        +ESE+ TL          L++ +DDPL K  Q+  E+A +TR P   KQ        T+ ++    +++DDE ++K+INE +++ +  G ED+FQ QA+L
Subjt:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL

Query:  QKRAMKQEKQIMDLELKIDN
        Q+  ++ +K + DLELK D+
Subjt:  QKRAMKQEKQIMDLELKIDN

A0A5A7U0L9 Uncharacterized protein9.1e-1255.56Show/hide
Query:  GETRAPLSSKQTENQQGNAAEENDDEE-FYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQ
        GET APL  KQ  NQQ NAA E+D+E+ ++K+I +   K +MDG +D+FQNQ  LQ+   + EKQI DLELKIDN   HHQ
Subjt:  GETRAPLSSKQTENQQGNAAEENDDEE-FYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQ

A0A5D3DK59 Gag-pol2.3e-0745.05Show/hide
Query:  EDATLAPESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQTENQQGNAAEENDDE-EFYKYINEAIAKAMMDGLEDIFQNQASLQK
        E+ATL          +E VDD L K  QI  E+ GE   P   KQT  QQ N   E+DDE +++K+I++   K MMD LEDIFQ Q+ LQ+
Subjt:  EDATLAPESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQTENQQGNAAEENDDE-EFYKYINEAIAKAMMDGLEDIFQNQASLQK

A0A5D3DS12 Uncharacterized protein4.7e-0848.31Show/hide
Query:  DEEFYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQSQHDQLASKIASLKEQNKAIVNLIKKASLRSDR
        D+E++K+I     K M DG EDIFQ QA+LQ+  M+ +KQ+ +LEL+IDN    HQ+Q D +   I SLK QN+A+  LIK+AS +++R
Subjt:  DEEFYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQEKQIMDLELKIDN---HHQSQHDQLASKIASLKEQNKAIVNLIKKASLRSDR

A0A5D3E1H0 Uncharacterized protein2.1e-0835.83Show/hide
Query:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL
        +ESE+ TL          L++ +DDPL K  Q+  E+A +TR P   KQ        T+ ++    +++DDE ++K+INE +++ +  G ED+FQ QA+L
Subjt:  RESEDATLA-PESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQ--------TENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASL

Query:  QKRAMKQEKQIMDLELKIDN
        Q+  ++ +K + DLELK D+
Subjt:  QKRAMKQEKQIMDLELKIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGTGATACTGAATTTAAAGACTATAGAGAATCAGAGGACGCGACGTTAGCCCCTGAGTCGCAGCAAACCGTCTTTCTTGACGAGCTAGTTGATGACCC
ACTCCCCAAGGATAACCAAATAACCCTTGAGGAGGCTGGTGAGACGCGAGCTCCTTTGTCGTCAAAGCAAACTGAAAATCAACAAGGCAATGCGGCGGAAGAGAATGATG
ATGAAGAATTTTACAAGTACATTAATGAGGCAATCGCAAAGGCAATGATGGATGGACTTGAAGATATTTTTCAAAACCAAGCCAGTCTGCAAAAACGTGCAATGAAACAA
GAAAAGCAGATCATGGACTTGGAATTAAAAATAGACAACCACCATCAGTCCCAGCATGATCAACTCGCATCTAAAATCGCGAGCCTCAAGGAACAAAATAAGGCGATAGT
GAATTTGATCAAGAAAGCTTCTTTGCGGTCTGACAGACAATACAAATCAATGATGAATTACATCCACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCTAGTCCGCTTG
AATTTAAGGATCCCCTTTCAGACACTGAATTGGACGCCACACCAAGACCTTCCAAAACGCTGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGTGATACTGAATTTAAAGACTATAGAGAATCAGAGGACGCGACGTTAGCCCCTGAGTCGCAGCAAACCGTCTTTCTTGACGAGCTAGTTGATGACCC
ACTCCCCAAGGATAACCAAATAACCCTTGAGGAGGCTGGTGAGACGCGAGCTCCTTTGTCGTCAAAGCAAACTGAAAATCAACAAGGCAATGCGGCGGAAGAGAATGATG
ATGAAGAATTTTACAAGTACATTAATGAGGCAATCGCAAAGGCAATGATGGATGGACTTGAAGATATTTTTCAAAACCAAGCCAGTCTGCAAAAACGTGCAATGAAACAA
GAAAAGCAGATCATGGACTTGGAATTAAAAATAGACAACCACCATCAGTCCCAGCATGATCAACTCGCATCTAAAATCGCGAGCCTCAAGGAACAAAATAAGGCGATAGT
GAATTTGATCAAGAAAGCTTCTTTGCGGTCTGACAGACAATACAAATCAATGATGAATTACATCCACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCTAGTCCGCTTG
AATTTAAGGATCCCCTTTCAGACACTGAATTGGACGCCACACCAAGACCTTCCAAAACGCTGCTATAA
Protein sequenceShow/hide protein sequence
MQDLCDTEFKDYRESEDATLAPESQQTVFLDELVDDPLPKDNQITLEEAGETRAPLSSKQTENQQGNAAEENDDEEFYKYINEAIAKAMMDGLEDIFQNQASLQKRAMKQ
EKQIMDLELKIDNHHQSQHDQLASKIASLKEQNKAIVNLIKKASLRSDRQYKSMMNYIHAAITSLVPKPASPLEFKDPLSDTELDATPRPSKTLL