; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025385 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025385
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8862513..8863546
RNA-Seq ExpressionPI0025385
SyntenyPI0025385
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]5.6e-6964.85Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L SGV +EVFCVYASN N++RR+LW RLVEITS WS PGVVM DFNAIRVHSEA  GS   G+ME+F+LAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L  WP++ V+VLPWGISDH PILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLV LMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]2.5e-6966.34Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV G L++L  GV +EV CVYASN + +RR LWR L EITS WS  GVVMGDFNAIRVHSEA GGS   G+MEEFDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN++ L AWP++R++VLPWGISDHSPILFYP  +   R VSFRFFNHW EE SF +VV+ +W R  GVS LVSLMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-7166.83Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L  GV +EVFCVYASN N++RR+LW RLVE TS WS PGVVMGDFNAIRVHSEA GGS   G+ME+FDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L AWP++ V+VLPWGISDHSPILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLVSLMRNLH LKP LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]5.6e-6964.85Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L SGV +EVFCVYASN N++RR+LW RLVEITS WS PGVVM DFNAIRVHSEA  GS   G+ME+F+LAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L  WP++ V+VLPWGISDH PILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLV LMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.6e-7166.83Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L  GV +EVFCVYASN N++RR+LW RLVE TS WS PGVVMGDFNAIRVHSEA GGS   G+ME+FDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L AWP++ V+VLPWGISDHSPILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLVSLMRNLH LKP LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041007.6e-7266.83Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L  GV +EVFCVYASN N++RR+LW RLVE TS WS PGVVMGDFNAIRVHSEA GGS   G+ME+FDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L AWP++ V+VLPWGISDHSPILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLVSLMRNLH LKP LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

A0A5A7SPE5 Reverse transcriptase domain-containing protein2.7e-6964.85Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L SGV +EVFCVYASN N++RR+LW RLVEITS WS PGVVM DFNAIRVHSEA  GS   G+ME+F+LAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L  WP++ V+VLPWGISDH PILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLV LMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.2e-6966.34Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV G L++L  GV +EV CVYASN + +RR LWR L EITS WS  GVVMGDFNAIRVHSEA GGS   G+MEEFDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN++ L AWP++R++VLPWGISDHSPILFYP  +   R VSFRFFNHW EE SF +VV+ +W R  GVS LVSLMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

A0A5A7V275 Reverse transcriptase7.6e-7266.83Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L  GV +EVFCVYASN N++RR+LW RLVE TS WS PGVVMGDFNAIRVHSEA GGS   G+ME+FDLAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L AWP++ V+VLPWGISDHSPILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLVSLMRNLH LKP LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

A0A5D3DXE4 Reverse transcriptase domain-containing protein2.7e-6964.85Show/hide
Query:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----
        FV+G L++L SGV +EVFCVYASN N++RR+LW RLVEITS WS PGVVM DFNAIRVHSEA  GS   G+ME+F+LAIRDADLVEP VQ NWF W    
Subjt:  FVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRW----

Query:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK
             L RLDR+LVN+  L  WP++ V+VLPWGISDH PILFYP  +   + VSFRFFNHW E+ SF +VV+ +W R  GVSPLV LMRNLH LKP+LR+
Subjt:  -----LHRLDRILVNEQRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRK

Query:  HF
         F
Subjt:  HF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGTTTTGTTTCTGGTGTGCTTTCTAATCTGAATTCTGGTGTGACTATGGAGGTGTTTTGTGTTTATGCCTCTAATGGTAATGTGGACCGTCGTGTGCTTTGGCG
TCGGTTAGTTGAGATCACTTCTGGATGGTCGATTCCGGGTGTGGTTATGGGCGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTGGCCACTGGTG
ATATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGTTGTTCAGGAAAACTGGTTCAGGTGGTTGCATCGGCTTGATCGTATTTTGGTTAATGAG
CAGAGGTTAATGGCTTGGCCTAGTCTGCGTGTTTCAGTTTTGCCTTGGGGGATTTCTGATCATTCCCCTATTTTATTCTATCCTGGTGTTGAGCCGCAGAGGCGTTTTGT
TTCGTTTCGTTTCTTTAACCATTGGGCGGAGGAGATGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGGA
ATTTGCATGATCTGAAACCTGTGCTTCGTAAACATTTTGAATGTGATAGTAGACTTCGCAAACAGAGTCCAAATGAAGAAAAACGAAAATCACCTCAAACAGAGTCCAAA
CGAAGAAAAACGAACAAATCAAAGTTTAGGGACAAAATGATAAATAACCAAAAAGATTCAAATAAATCAACGCACGCACAATCCACCTCCACGTCTCATGTTCGAATCTC
AGCCGCGCATATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGTTTTGTTTCTGGTGTGCTTTCTAATCTGAATTCTGGTGTGACTATGGAGGTGTTTTGTGTTTATGCCTCTAATGGTAATGTGGACCGTCGTGTGCTTTGGCG
TCGGTTAGTTGAGATCACTTCTGGATGGTCGATTCCGGGTGTGGTTATGGGCGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCTGGCCACTGGTG
ATATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGTTGTTCAGGAAAACTGGTTCAGGTGGTTGCATCGGCTTGATCGTATTTTGGTTAATGAG
CAGAGGTTAATGGCTTGGCCTAGTCTGCGTGTTTCAGTTTTGCCTTGGGGGATTTCTGATCATTCCCCTATTTTATTCTATCCTGGTGTTGAGCCGCAGAGGCGTTTTGT
TTCGTTTCGTTTCTTTAACCATTGGGCGGAGGAGATGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGGA
ATTTGCATGATCTGAAACCTGTGCTTCGTAAACATTTTGAATGTGATAGTAGACTTCGCAAACAGAGTCCAAATGAAGAAAAACGAAAATCACCTCAAACAGAGTCCAAA
CGAAGAAAAACGAACAAATCAAAGTTTAGGGACAAAATGATAAATAACCAAAAAGATTCAAATAAATCAACGCACGCACAATCCACCTCCACGTCTCATGTTCGAATCTC
AGCCGCGCATATTTTTTAA
Protein sequenceShow/hide protein sequence
MSSFVSGVLSNLNSGVTMEVFCVYASNGNVDRRVLWRRLVEITSGWSIPGVVMGDFNAIRVHSEACGGSLATGDMEEFDLAIRDADLVEPVVQENWFRWLHRLDRILVNE
QRLMAWPSLRVSVLPWGISDHSPILFYPGVEPQRRFVSFRFFNHWAEEMSFSDVVSSVWVRRLGVSPLVSLMRNLHDLKPVLRKHFECDSRLRKQSPNEEKRKSPQTESK
RRKTNKSKFRDKMINNQKDSNKSTHAQSTSTSHVRISAAHIF