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PI0025402 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025402
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:9971599..9971841
RNA-Seq ExpressionPI0025402
SyntenyPI0025402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]2.4e-1561.54Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNF
        M   QVNAA SS Q+  Q+D++ C+  G PH  DACPLN E VA+V+++PYSNTYNP WRNHPNF
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNF

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]1.1e-1854.43Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG
        M ++QVN   SSV     + ++ CVGC G +NTD CP NT+ + + +N+PYSNTYN GWRNH NF WGG GQ NQG+ G
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]5.2e-1864.71Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG
        M + +VN A+S V    Q+ +L CVGCGGPHNTD CP NTETVA+V+N+PY NTYN GWRNH NF WG
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]2.4e-1569.64Show/hide
Query:  CVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG
        CVG G PHNT+ CPLNTE VA+V+N+PYSNTYN GWR HPNF WGG    NQG+ G
Subjt:  CVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]2.3e-1364.06Show/hide
Query:  QVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG
        QVNAA S V A  Q+ +L CVGC GPHNT+ACP N E  A V+   +SNTYN GWRNHPNF WG
Subjt:  QVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein5.1e-1954.43Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG
        M ++QVN   SSV     + ++ CVGC G +NTD CP NT+ + + +N+PYSNTYN GWRNH NF WGG GQ NQG+ G
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG

A0A5A7VE68 Uncharacterized protein2.5e-1864.71Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG
        M + +VN A+S V    Q+ +L CVGCGGPHNTD CP NTETVA+V+N+PY NTYN GWRNH NF WG
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG

A0A5D3BYZ5 Uncharacterized protein1.2e-1569.64Show/hide
Query:  CVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG
        CVG G PHNT+ CPLNTE VA+V+N+PYSNTYN GWR HPNF WGG    NQG+ G
Subjt:  CVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHG

A0A5D3CGY4 Uncharacterized protein1.1e-1364.06Show/hide
Query:  QVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG
        QVNAA S V A  Q+ +L CVGC GPHNT+ACP N E  A V+   +SNTYN GWRNHPNF WG
Subjt:  QVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWG

A0A5D3CSC7 Uncharacterized protein1.2e-1561.54Show/hide
Query:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNF
        M   QVNAA SS Q+  Q+D++ C+  G PH  DACPLN E VA+V+++PYSNTYNP WRNHPNF
Subjt:  MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAGGTTAATGCCGCTGAAAGCTCTGTGCAGGCGGGGAATCAAATTGATGATTTGAGGTGCGTGGGATGCGGCGGTCCTCATAATACTGACGCATGCCC
ACTAAACACTGAAACTGTCGCTTTCGTTAGGAACAACCCTTACTCCAACACCTACAATCCTGGTTGGAGAAATCATCCTAACTTTGGATGGGGAGGAATGGGTCAACAAA
ACCAAGGGCAACATGGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAGGTTAATGCCGCTGAAAGCTCTGTGCAGGCGGGGAATCAAATTGATGATTTGAGGTGCGTGGGATGCGGCGGTCCTCATAATACTGACGCATGCCC
ACTAAACACTGAAACTGTCGCTTTCGTTAGGAACAACCCTTACTCCAACACCTACAATCCTGGTTGGAGAAATCATCCTAACTTTGGATGGGGAGGAATGGGTCAACAAA
ACCAAGGGCAACATGGTGGTTAA
Protein sequenceShow/hide protein sequence
MAISQVNAAESSVQAGNQIDDLRCVGCGGPHNTDACPLNTETVAFVRNNPYSNTYNPGWRNHPNFGWGGMGQQNQGQHGG