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PI0025404 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025404
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr01:14778494..14779111
RNA-Seq ExpressionPI0025404
SyntenyPI0025404
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]8.1e-0735.83Show/hide
Query:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL
        +ESE+ TL    L     L++  DDP  K  Q   E+A +    SPPKQ+      + +Q  A+ +++D+D  ++K+INE V++P+    ED+FQ QANL
Subjt:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL

Query:  QELAAKYEKQIVNLKTKMDN
        QE   + +K + +L+ K D+
Subjt:  QELAAKYEKQIVNLKTKMDN

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]9.6e-0829.8Show/hide
Query:  EDYRESEDATLAP-ELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDEDFYKYINEAVAKPMMVELEDIFQTQANLQELAA
        ++ ++ +DA L P    +   L++  DD   K  Q   E  G+ +  SPPKQ   QQD   E ++++++ K+                            
Subjt:  EDYRESEDATLAP-ELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDEDFYKYINEAVAKPMMVELEDIFQTQANLQELAA

Query:  KYEKQIVNLKTKMDNYHQSQHDQLASEVASLKEQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKPAISPEFEEPFSDNEVD--VAAEPSETR
        K E  I  LKT+ +               +++ Q + M + IK+ASL  + Q ++LMNYIH  I SLVP P   PE EEP ++ E     A EPSE R
Subjt:  KYEKQIVNLKTKMDNYHQSQHDQLASEVASLKEQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKPAISPEFEEPFSDNEVD--VAAEPSETR

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]4.0e-0630.22Show/hide
Query:  LSPPKQTEDQQDHAVEEN---NDEDF-YKYINEAVAKPMMVELEDIFQTQANLQELAAKYEKQIVNLKTKMDN---YHQSQHDQLASEV-------ASLK
        +SP ++   +   AV E+   +DED+  K+ ++ V KPM    ED  Q Q+N QE+  + +KQ+ + K K+DN   +HQ Q + L +++         LK
Subjt:  LSPPKQTEDQQDHAVEEN---NDEDF-YKYINEAVAKPMMVELEDIFQTQANLQELAAKYEKQIVNLKTKMDN---YHQSQHDQLASEV-------ASLK

Query:  EQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKP
         QN+ ++ ++K+ +   D Q+ S + Y+++++ S++P P
Subjt:  EQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKP

TYK23898.1 gag-pol [Cucumis melo var. makuwa]7.4e-0846.15Show/hide
Query:  EDATLAPELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDED-FYKYINEAVAKPMMVELEDIFQTQANLQE
        E+ATL          +EP DD   K  Q   E+ GE    SP KQT +QQD+   E++DED ++K+I++   KPMM ELEDIFQ Q++LQE
Subjt:  EDATLAPELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDED-FYKYINEAVAKPMMVELEDIFQTQANLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]8.1e-0735.83Show/hide
Query:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL
        +ESE+ TL    L     L++  DDP  K  Q   E+A +    SPPKQ+      + +Q  A+ +++D+D  ++K+INE V++P+    ED+FQ QANL
Subjt:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL

Query:  QELAAKYEKQIVNLKTKMDN
        QE   + +K + +L+ K D+
Subjt:  QELAAKYEKQIVNLKTKMDN

TrEMBL top hitse value%identityAlignment
A0A0A0KJB9 Uncharacterized protein2.0e-0630.22Show/hide
Query:  LSPPKQTEDQQDHAVEEN---NDEDF-YKYINEAVAKPMMVELEDIFQTQANLQELAAKYEKQIVNLKTKMDN---YHQSQHDQLASEV-------ASLK
        +SP ++   +   AV E+   +DED+  K+ ++ V KPM    ED  Q Q+N QE+  + +KQ+ + K K+DN   +HQ Q + L +++         LK
Subjt:  LSPPKQTEDQQDHAVEEN---NDEDF-YKYINEAVAKPMMVELEDIFQTQANLQELAAKYEKQIVNLKTKMDN---YHQSQHDQLASEV-------ASLK

Query:  EQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKP
         QN+ ++ ++K+ +   D Q+ S + Y+++++ S++P P
Subjt:  EQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKP

A0A5A7TJU0 Uncharacterized protein3.9e-0735.83Show/hide
Query:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL
        +ESE+ TL    L     L++  DDP  K  Q   E+A +    SPPKQ+      + +Q  A+ +++D+D  ++K+INE V++P+    ED+FQ QANL
Subjt:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL

Query:  QELAAKYEKQIVNLKTKMDN
        QE   + +K + +L+ K D+
Subjt:  QELAAKYEKQIVNLKTKMDN

A0A5A7VKU1 Uncharacterized protein4.7e-0829.8Show/hide
Query:  EDYRESEDATLAP-ELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDEDFYKYINEAVAKPMMVELEDIFQTQANLQELAA
        ++ ++ +DA L P    +   L++  DD   K  Q   E  G+ +  SPPKQ   QQD   E ++++++ K+                            
Subjt:  EDYRESEDATLAP-ELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDEDFYKYINEAVAKPMMVELEDIFQTQANLQELAA

Query:  KYEKQIVNLKTKMDNYHQSQHDQLASEVASLKEQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKPAISPEFEEPFSDNEVD--VAAEPSETR
        K E  I  LKT+ +               +++ Q + M + IK+ASL  + Q ++LMNYIH  I SLVP P   PE EEP ++ E     A EPSE R
Subjt:  KYEKQIVNLKTKMDNYHQSQHDQLASEVASLKEQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKPAISPEFEEPFSDNEVD--VAAEPSETR

A0A5D3DK59 Gag-pol3.6e-0846.15Show/hide
Query:  EDATLAPELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDED-FYKYINEAVAKPMMVELEDIFQTQANLQE
        E+ATL          +EP DD   K  Q   E+ GE    SP KQT +QQD+   E++DED ++K+I++   KPMM ELEDIFQ Q++LQE
Subjt:  EDATLAPELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDED-FYKYINEAVAKPMMVELEDIFQTQANLQE

A0A5D3E1H0 Uncharacterized protein3.9e-0735.83Show/hide
Query:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL
        +ESE+ TL    L     L++  DDP  K  Q   E+A +    SPPKQ+      + +Q  A+ +++D+D  ++K+INE V++P+    ED+FQ QANL
Subjt:  RESEDATLA-PELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQT------EDQQDHAVEENNDED--FYKYINEAVAKPMMVELEDIFQTQANL

Query:  QELAAKYEKQIVNLKTKMDN
        QE   + +K + +L+ K D+
Subjt:  QELAAKYEKQIVNLKTKMDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCGATACGGAATTTGAAGATTACAGAGAGTCAGAGGATGCGACGTTGGCACCTGAGTTGCAACAAACCGTCTTTCTTGACGAGCCAACTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGAGGAAGCTGGTGAGATGTGGGCTCTTTCGCCGCCTAAGCAAACTGAAGATCAACAAGACCATGCGGTGGAAGAGAATAACG
ATGAAGATTTCTACAAGTACATTAATGAGGCAGTCGCCAAGCCAATGATGGTTGAACTTGAAGATATTTTCCAAACCCAAGCCAATCTGCAAGAACTTGCGGCGAAATAT
GAGAAGCAGATTGTGAACTTGAAAACAAAAATGGACAACTACCATCAATCGCAGCACGACCAGCTCGCATCTGAAGTAGCGAGCTTGAAGGAGCAAAACAAGGCAATGGT
GAGTTTGATCAAGAAGGCTTCCTTGCGGCCTGACAGGCAATACAAATCATTGATGAACTACATCCACGCGGCCATCACAAGCCTCGTACCTAAGCCTGCCATTTCGCCTG
AATTCGAAGAACCCTTTTCTGATAATGAAGTGGACGTCGCGGCAGAACCTTCCGAAACGCGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCGATACGGAATTTGAAGATTACAGAGAGTCAGAGGATGCGACGTTGGCACCTGAGTTGCAACAAACCGTCTTTCTTGACGAGCCAACTGATGACCC
AACTCCCAAGGAAAATCAAACAACCCTTGAGGAAGCTGGTGAGATGTGGGCTCTTTCGCCGCCTAAGCAAACTGAAGATCAACAAGACCATGCGGTGGAAGAGAATAACG
ATGAAGATTTCTACAAGTACATTAATGAGGCAGTCGCCAAGCCAATGATGGTTGAACTTGAAGATATTTTCCAAACCCAAGCCAATCTGCAAGAACTTGCGGCGAAATAT
GAGAAGCAGATTGTGAACTTGAAAACAAAAATGGACAACTACCATCAATCGCAGCACGACCAGCTCGCATCTGAAGTAGCGAGCTTGAAGGAGCAAAACAAGGCAATGGT
GAGTTTGATCAAGAAGGCTTCCTTGCGGCCTGACAGGCAATACAAATCATTGATGAACTACATCCACGCGGCCATCACAAGCCTCGTACCTAAGCCTGCCATTTCGCCTG
AATTCGAAGAACCCTTTTCTGATAATGAAGTGGACGTCGCGGCAGAACCTTCCGAAACGCGGCTATAA
Protein sequenceShow/hide protein sequence
MQDLCDTEFEDYRESEDATLAPELQQTVFLDEPTDDPTPKENQTTLEEAGEMWALSPPKQTEDQQDHAVEENNDEDFYKYINEAVAKPMMVELEDIFQTQANLQELAAKY
EKQIVNLKTKMDNYHQSQHDQLASEVASLKEQNKAMVSLIKKASLRPDRQYKSLMNYIHAAITSLVPKPAISPEFEEPFSDNEVDVAAEPSETRL