; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025433 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025433
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr06:19230651..19231166
RNA-Seq ExpressionPI0025433
SyntenyPI0025433
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]4.1e-6076.05Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++RLS I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]5.9e-5976.36Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++RLSGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]6.3e-6177.51Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +R  GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNF
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTR F
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNF

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]3.9e-5579.43Show/hide
Query:  MSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD
        MSADQYAMDLGFTTVTRS++R S IRIES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNFTSLF
         IIEPEYQS+T+++TVSKIF + FN LPEDLRKTRNF SLF
Subjt:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNFTSLF

KAE8646253.1 hypothetical protein Csa_023844, partial [Cucumis sativus]3.6e-5676.47Show/hide
Query:  RVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAP
        R +STSS+G+RPSSS N APSPMSADQYAMDLGFTTVTRS+AR S I+I SPT+SSTPPR SANL+RPS  + QMRP ASPLSN ESSTPPTTYSQ + P
Subjt:  RVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAP

Query:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDL
        +KRF+PR EIK+YFQK V++YD IIEPEYQSLT++ETVSKIFP+ FNFLP+DL
Subjt:  EKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDL

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein3.0e-6177.51Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +R  GI I SPTESSTPPRPS NL+RPS G+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNF
        PTTYSQAV P+KRF+PRPEIK+YFQK +V+YDPIIE EYQSLT +ETVSKIFPE FNFL EDLRKTR F
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNF

A0A5D3BM67 Uncharacterized protein1.9e-5579.43Show/hide
Query:  MSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD
        MSADQYAMDLGFTTVTRS++R S IRIES TESSTPPRPSANL+RP GG  QMRPPASP SN ESSTPPTTYSQ V P+KRF+PRPEIK+YFQK +V+YD
Subjt:  MSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYD

Query:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNFTSLF
         IIEPEYQS+T+++TVSKIF + FN LPEDLRKTRNF SLF
Subjt:  PIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNFTSLF

A0A5D3DHH1 Uncharacterized protein2.3e-4870.55Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESST-
        MSS +G  RGR +STSSKG+RPSSS N  PS +SA QYA+DLGFT VTRS++RL GI I S TESSTP RPSANL+RPSG + QMR  ASP SN+ESST 
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESST-

Query:  PPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDE-TVSKIFPEGFNFLPE
        PPTTYSQAV P+KRF+PRPE KTYF+K + +Y P IE EYQ+LT++E TVSKIFP+GFNFLPE
Subjt:  PPTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDE-TVSKIFPEGFNFLPE

A0A5D3E4J4 Uncharacterized protein2.8e-5976.36Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG+R SSS N APSPMSADQYAMDLGFT VTRS++RLSGI I  PTESSTPPRPSANL+RP G + QM+PPASP SN +SSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK
        PTTYSQAV P+KRF+PRP+IK YFQK +V+YDP IE EYQSLT++E VSKIFPE FNFLPEDLRK
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRK

E5GCE6 Uncharacterized protein2.0e-6076.05Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP
        MSS +G  RGR +STSSKG RPSSS N  PSPMSA QY MDLGFT VTRS++RLS I I SPTESSTPPRPS NL+RPSGG+ QMRPPASP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTP

Query:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR
        PTTYSQAV  +KRF+PRPEIK+YFQK +V+YDPIIEPEYQSLT++E VSKIFP+ FNFLPEDL+K +
Subjt:  PTTYSQAVAPEKRFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATTGTCCGGCATACGGATTGAATCCCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGAAATTTTACGAGTTTATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATTGTCCGGCATACGGATTGAATCCCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTATCGATGAGACAGTTTC
AAAAATTTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACAAGAAATTTTACGAGTTTATTCTAG
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDLGFTTVTRSKARLSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFQKQVVIYDPIIEPEYQSLTIDETVSKIFPEGFNFLPEDLRKTRNFTSLF