; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025450 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025450
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8914984..8917354
RNA-Seq ExpressionPI0025450
SyntenyPI0025450
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]5.3e-11544.3Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        ++DEQFV+  ++DL SG+ VEV CVYASNSN++ R+L HRLVEITS+WSSP VVM DFNAIRVHSEA  G+PI  +M++FNLAIR+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK
        WTSK                                                              VE+ SF +VV+ +W    GVSPLV LMRNLH LK
Subjt:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK

Query:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------
        P+LRR FGRHI+  SE+VR  KEAMD AQRE+         GS E   R+    ID      WS          I +EE                     
Subjt:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------

Query:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------
                               H  S                   WL   +    SAF               LIR+ +       +++          
Subjt:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------

Query:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV
        +G+R      P L                  F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS +FVA V+ E A+ 
Subjt:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV

Query:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR
        L   MGFA G LP RYLG+PLL+GRLR++DCA LIQ ITS+IRSW+ARVLSF+GRL LVRSVLRS QV+WASVFVLPA VH+ VD +L SYLWRGKE GR
Subjt:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR

Query:  GGAKVAWVDVCRSLEEGGLNIQE
        GG KVAWVDVC   EEGG  I++
Subjt:  GGAKVAWVDVCRSLEEGGLNIQE

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]4.0e-12348.55Show/hide
Query:  SNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK----------VENTSFSDVVSSV
        S + MD + +    VEITS+WSSP VVMGDFNAIRV+SEA GG+PI  +M++F+LAIR+ DLVEP VQGN F   SK          VE+ SF +VV+  
Subjt:  SNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK----------VENTSFSDVVSSV

Query:  WVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNS
        W    GVSPLVSLM+NLH LKP+LR  FGRHI+  +E VR AK AMD AQR+VER+P S   SR A +A + FW+A+R EEASL QKS +RWL+LGDQN+
Subjt:  WVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNS

Query:  AFFHRLIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------------------------------------------------RP-
        AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                                                RP 
Subjt:  AFFHRLIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------------------------------------------------RP-

Query:  ---------------------------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLR
                                                                    F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L+
Subjt:  ---------------------------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLR

Query:  QFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWA
        +FG+LSGL AN  KS +FVA V+ E A+ L   MGF  G L  RYLG+PLL+GRL ++DCA LIQ ITS+IRSW+ARVLSF+GR+ LV SVLRS QV+WA
Subjt:  QFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWA

Query:  SVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE
        SVFVLPA VH+ VD +L SYLWRGKE GRGG KVAWVDVC   EEGGL I++
Subjt:  SVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.2e-11439.66Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        +VDEQFV+  ++DL SG+ VEV CVYASNSN++ R+L  RLVEITS WSSP VVMGDFNAIRVH EA GG+PI  +M++F+LA R+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQR
        WTSK                                VE+ SF +VV+ +W    GVSPLVSLMRNL +LKP LRR FGRHI+  +E+V  AKE MDRAQR
Subjt:  WTSK--------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQR

Query:  EVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNLLSIVDSEGIRVTSHE----------RPSL------
        EVE +P S   SR  G+A +AFW+A+R EEASL QKS +RWLELGDQN+AFFHR +RSR+ RN+LLS+VD++G RV+SH+          R SL      
Subjt:  EVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNLLSIVDSEGIRVTSHE----------RPSL------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLP
                          FK+HHRC+KV L HLTFADDLMIFC AD  S+                                EAA+ L  SMGF LG LP
Subjt:  -----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLP

Query:  ARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVD
         RYLG+PLL+GRLR++DCA LIQ ITSRIRSW+A VLSF+GRL LVRSVLRS QV+W SVF+LP  VH+ VD +L SYLWRGKE GRGG KVAWV+
Subjt:  ARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVD

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]6.4e-12148.51Show/hide
Query:  VVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK-------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRN
        VVMGDFNAIRV+SEA GG+PI  +M++F+LAIR+ DLVEP VQGNWFTWTSK                   VE+ SF +VV+  W    GVSPLVSLM+N
Subjt:  VVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK-------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRN

Query:  LHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNL
        LH LKP+LR  FGRHI+  +E VR AK AMD AQR+VER+P S   SR A +A + FW+A+R EEASL QKS +RWL+LGDQN+AFFHR + SR+ RN+L
Subjt:  LHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNL

Query:  LSIVDS--EGIRVTSHE----------------------------------------------------------------RP-----------------
        LS+VDS  +G RV+SH+                                                                RP                 
Subjt:  LSIVDS--EGIRVTSHE----------------------------------------------------------------RP-----------------

Query:  -----------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSF
                                                    F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS 
Subjt:  -----------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSF

Query:  MFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSL
        +FVA V+ E A+ L   MGF  G L  RYLG+PLL+GRL ++DCA LIQ ITS+IRSW+ARVLSF+GR+ LV SVLRS QV+WASVFVLPA VH+ VD +
Subjt:  MFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSL

Query:  LMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE
        L SYLWRGKE GRGG KVAWVDVC   EEGGL I++
Subjt:  LMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]5.3e-11544.3Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        ++DEQFV+  ++DL SG+ VEV CVYASNSN++ R+L HRLVEITS+WSSP VVM DFNAIRVHSEA  G+PI  +M++FNLAIR+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK
        WTSK                                                              VE+ SF +VV+ +W    GVSPLV LMRNLH LK
Subjt:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK

Query:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------
        P+LRR FGRHI+  SE+VR  KEAMD AQRE+         GS E   R+    ID      WS          I +EE                     
Subjt:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------

Query:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------
                               H  S                   WL   +    SAF               LIR+ +       +++          
Subjt:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------

Query:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV
        +G+R      P L                  F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS +FVA V+ E A+ 
Subjt:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV

Query:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR
        L   MGFA G LP RYLG+PLL+GRLR++DCA LIQ ITS+IRSW+ARVLSF+GRL LVRSVLRS QV+WASVFVLPA VH+ VD +L SYLWRGKE GR
Subjt:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR

Query:  GGAKVAWVDVCRSLEEGGLNIQE
        GG KVAWVDVC   EEGG  I++
Subjt:  GGAKVAWVDVCRSLEEGGLNIQE

TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein2.5e-11544.3Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        ++DEQFV+  ++DL SG+ VEV CVYASNSN++ R+L HRLVEITS+WSSP VVM DFNAIRVHSEA  G+PI  +M++FNLAIR+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK
        WTSK                                                              VE+ SF +VV+ +W    GVSPLV LMRNLH LK
Subjt:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK

Query:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------
        P+LRR FGRHI+  SE+VR  KEAMD AQRE+         GS E   R+    ID      WS          I +EE                     
Subjt:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------

Query:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------
                               H  S                   WL   +    SAF               LIR+ +       +++          
Subjt:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------

Query:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV
        +G+R      P L                  F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS +FVA V+ E A+ 
Subjt:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV

Query:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR
        L   MGFA G LP RYLG+PLL+GRLR++DCA LIQ ITS+IRSW+ARVLSF+GRL LVRSVLRS QV+WASVFVLPA VH+ VD +L SYLWRGKE GR
Subjt:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR

Query:  GGAKVAWVDVCRSLEEGGLNIQE
        GG KVAWVDVC   EEGG  I++
Subjt:  GGAKVAWVDVCRSLEEGGLNIQE

A0A5A7TWG5 Reverse transcriptase domain-containing protein1.9e-12348.55Show/hide
Query:  SNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK----------VENTSFSDVVSSV
        S + MD + +    VEITS+WSSP VVMGDFNAIRV+SEA GG+PI  +M++F+LAIR+ DLVEP VQGN F   SK          VE+ SF +VV+  
Subjt:  SNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK----------VENTSFSDVVSSV

Query:  WVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNS
        W    GVSPLVSLM+NLH LKP+LR  FGRHI+  +E VR AK AMD AQR+VER+P S   SR A +A + FW+A+R EEASL QKS +RWL+LGDQN+
Subjt:  WVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNS

Query:  AFFHRLIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------------------------------------------------RP-
        AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                                                                RP 
Subjt:  AFFHRLIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------------------------------------------------RP-

Query:  ---------------------------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLR
                                                                    F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L+
Subjt:  ---------------------------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLR

Query:  QFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWA
        +FG+LSGL AN  KS +FVA V+ E A+ L   MGF  G L  RYLG+PLL+GRL ++DCA LIQ ITS+IRSW+ARVLSF+GR+ LV SVLRS QV+WA
Subjt:  QFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWA

Query:  SVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE
        SVFVLPA VH+ VD +L SYLWRGKE GRGG KVAWVDVC   EEGGL I++
Subjt:  SVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein5.7e-11539.66Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        +VDEQFV+  ++DL SG+ VEV CVYASNSN++ R+L  RLVEITS WSSP VVMGDFNAIRVH EA GG+PI  +M++F+LA R+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQR
        WTSK                                VE+ SF +VV+ +W    GVSPLVSLMRNL +LKP LRR FGRHI+  +E+V  AKE MDRAQR
Subjt:  WTSK--------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQR

Query:  EVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNLLSIVDSEGIRVTSHE----------RPSL------
        EVE +P S   SR  G+A +AFW+A+R EEASL QKS +RWLELGDQN+AFFHR +RSR+ RN+LLS+VD++G RV+SH+          R SL      
Subjt:  EVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNLLSIVDSEGIRVTSHE----------RPSL------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLP
                          FK+HHRC+KV L HLTFADDLMIFC AD  S+                                EAA+ L  SMGF LG LP
Subjt:  -----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFALGTLP

Query:  ARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVD
         RYLG+PLL+GRLR++DCA LIQ ITSRIRSW+A VLSF+GRL LVRSVLRS QV+W SVF+LP  VH+ VD +L SYLWRGKE GRGG KVAWV+
Subjt:  ARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVD

A0A5D3D5X6 Reverse transcriptase domain-containing protein3.1e-12148.51Show/hide
Query:  VVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK-------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRN
        VVMGDFNAIRV+SEA GG+PI  +M++F+LAIR+ DLVEP VQGNWFTWTSK                   VE+ SF +VV+  W    GVSPLVSLM+N
Subjt:  VVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSK-------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRN

Query:  LHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNL
        LH LKP+LR  FGRHI+  +E VR AK AMD AQR+VER+P S   SR A +A + FW+A+R EEASL QKS +RWL+LGDQN+AFFHR + SR+ RN+L
Subjt:  LHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFFHRLIRSRIGRNNL

Query:  LSIVDS--EGIRVTSHE----------------------------------------------------------------RP-----------------
        LS+VDS  +G RV+SH+                                                                RP                 
Subjt:  LSIVDS--EGIRVTSHE----------------------------------------------------------------RP-----------------

Query:  -----------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSF
                                                    F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS 
Subjt:  -----------------------------------------SLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSF

Query:  MFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSL
        +FVA V+ E A+ L   MGF  G L  RYLG+PLL+GRL ++DCA LIQ ITS+IRSW+ARVLSF+GR+ LV SVLRS QV+WASVFVLPA VH+ VD +
Subjt:  MFVARVDIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSL

Query:  LMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE
        L SYLWRGKE GRGG KVAWVDVC   EEGGL I++
Subjt:  LMSYLWRGKEVGRGGAKVAWVDVCRSLEEGGLNIQE

A0A5D3DXE4 Reverse transcriptase domain-containing protein2.5e-11544.3Show/hide
Query:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT
        ++DEQFV+  ++DL SG+ VEV CVYASNSN++ R+L HRLVEITS+WSSP VVM DFNAIRVHSEA  G+PI  +M++FNLAIR+ADLVEP+VQGNWFT
Subjt:  MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFT

Query:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK
        WTSK                                                              VE+ SF +VV+ +W    GVSPLV LMRNLH LK
Subjt:  WTSK--------------------------------------------------------------VENTSFSDVVSSVWVSRLGVSPLVSLMRNLHDLK

Query:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------
        P+LRR FGRHI+  SE+VR  KEAMD AQRE+         GS E   R+    ID      WS          I +EE                     
Subjt:  PVLRRHFGRHIRGHSEDVRSAKEAMDRAQREV-----ERDPGSVERS-RDAGVAIDAF----WS---------AIRQEEA--------------------

Query:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------
                               H  S                   WL   +    SAF               LIR+ +       +++          
Subjt:  ---------------------SLHQKSWVR----------------WLE--LGDQNSAFF------------HRLIRSRIGRNNLLSIVDS---------

Query:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV
        +G+R      P L                  F++HHRC+KV L HLTFADDLMIFC AD  SI F+R+ L++FG+LSGL AN  KS +FVA V+ E A+ 
Subjt:  EGIRVTSHERPSL-----------------DFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATV

Query:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR
        L   MGFA G LP RYLG+PLL+GRLR++DCA LIQ ITS+IRSW+ARVLSF+GRL LVRSVLRS QV+WASVFVLPA VH+ VD +L SYLWRGKE GR
Subjt:  LTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGR

Query:  GGAKVAWVDVCRSLEEGGLNIQE
        GG KVAWVDVC   EEGG  I++
Subjt:  GGAKVAWVDVCRSLEEGGLNIQE

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-1030.77Show/hide
Query:  VPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGG
        +P+L  R+       +++ ++SR+  W  + LSF+GRL L ++VL S  V   S  +LP  + + +D L  ++LW      +    V W  VC   +EGG
Subjt:  VPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGG

Query:  LNIQ
        L ++
Subjt:  LNIQ

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.9e-2647.29Show/hide
Query:  DIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLW
        D + A +L  S  FA G LP RYLG+PLL+ ++  SD   L++ I  RI  W+AR LSF+GRL L+ SV+ S   FW S F LP+     +DS+  S+LW
Subjt:  DIEAATVLTDSMGFALGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLW

Query:  RGKEVGRGGAKVAWVDVCRSLEEGGLNIQ
         G E+    AKVAW DVC   +EGGL I+
Subjt:  RGKEVGRGGAKVAWVDVCRSLEEGGLNIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATGAGCAGTTTGTTTCAAGTGTCATTTCTGATTTGCATTCTGGTTTGACTGTGGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCATCGTATGCT
TCGGCATCGGTTAGTTGAGATCACTTCTAGTTGGTCGAGTCCATGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAATCCGATTA
CTAGTGATATGAAGGAATTTAATCTTGCTATTCGCGAGGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACTGGTTCACTTGGACCAGCAAGGTGGAGAATACGTCTTTC
AGTGATGTGGTGTCTTCGGTTTGGGTGAGCAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGGAATTTGCATGATCTGAAACCTGTACTTCGTAGACATTTTGGTAG
ACATATCAGGGGCCATAGTGAGGATGTGCGTTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAAAGGAGTCGTGATGCGG
GTGTTGCGATTGATGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCATCAAAAATCATGGGTTAGGTGGTTGGAGCTTGGAGATCAGAATTCTGCCTTTTTT
CATCGCTTGATTCGTTCCCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGTCCCATGAGAGACCATCTCTGGATTTCAAGTATCA
TCATCGTTGTAAGAAGGTTTGTTTGATGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTC
AGTTTGGGAAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTTTATGTTTGTGGCGAGGGTTGACATTGAGGCTGCTACTGTGTTGACTGATAGTATGGGGTTTGCA
CTGGGTACTTTGCCTGCTCGTTACTTGGGTGTTCCCTTACTCTCTGGTCGTCTGCGTGCTTCGGATTGTGCCTCGCTCATCCAGCATATTACTAGTCGAATTCGGTCTTG
GTCAGCTAGAGTTTTATCCTTCTCTGGTAGACTTCCGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTCTTTTGGGCCAGTGTGTTTGTTTTGCCGGCTGAGGTGCATC
ATGCGGTTGATAGTCTTTTGATGTCGTATTTGTGGAGGGGAAAGGAGGTTGGGAGAGGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGCTCGTTAGAGGAAGGGGGT
CTAAATATTCAGGAGGAAAGTCGTGGAACAGTGCGTGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATGAGCAGTTTGTTTCAAGTGTCATTTCTGATTTGCATTCTGGTTTGACTGTGGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCATCGTATGCT
TCGGCATCGGTTAGTTGAGATCACTTCTAGTTGGTCGAGTCCATGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAATCCGATTA
CTAGTGATATGAAGGAATTTAATCTTGCTATTCGCGAGGCTGACTTGGTTGAGCCAGCTGTTCAGGGAAACTGGTTCACTTGGACCAGCAAGGTGGAGAATACGTCTTTC
AGTGATGTGGTGTCTTCGGTTTGGGTGAGCAGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCGGAATTTGCATGATCTGAAACCTGTACTTCGTAGACATTTTGGTAG
ACATATCAGGGGCCATAGTGAGGATGTGCGTTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAAAGGAGTCGTGATGCGG
GTGTTGCGATTGATGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCATCAAAAATCATGGGTTAGGTGGTTGGAGCTTGGAGATCAGAATTCTGCCTTTTTT
CATCGCTTGATTCGTTCCCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGTCCCATGAGAGACCATCTCTGGATTTCAAGTATCA
TCATCGTTGTAAGAAGGTTTGTTTGATGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTC
AGTTTGGGAAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTTTATGTTTGTGGCGAGGGTTGACATTGAGGCTGCTACTGTGTTGACTGATAGTATGGGGTTTGCA
CTGGGTACTTTGCCTGCTCGTTACTTGGGTGTTCCCTTACTCTCTGGTCGTCTGCGTGCTTCGGATTGTGCCTCGCTCATCCAGCATATTACTAGTCGAATTCGGTCTTG
GTCAGCTAGAGTTTTATCCTTCTCTGGTAGACTTCCGCTTGTGCGTTCGGTGTTGCGGAGTTTTCAGGTCTTTTGGGCCAGTGTGTTTGTTTTGCCGGCTGAGGTGCATC
ATGCGGTTGATAGTCTTTTGATGTCGTATTTGTGGAGGGGAAAGGAGGTTGGGAGAGGGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGCTCGTTAGAGGAAGGGGGT
CTAAATATTCAGGAGGAAAGTCGTGGAACAGTGCGTGTATCTTGA
Protein sequenceShow/hide protein sequence
MVDEQFVSSVISDLHSGLTVEVLCVYASNSNMDHRMLRHRLVEITSSWSSPCVVMGDFNAIRVHSEACGGNPITSDMKEFNLAIREADLVEPAVQGNWFTWTSKVENTSF
SDVVSSVWVSRLGVSPLVSLMRNLHDLKPVLRRHFGRHIRGHSEDVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDAFWSAIRQEEASLHQKSWVRWLELGDQNSAFF
HRLIRSRIGRNNLLSIVDSEGIRVTSHERPSLDFKYHHRCKKVCLMHLTFADDLMIFCYADTASIGFVRETLRQFGKLSGLIANLDKSFMFVARVDIEAATVLTDSMGFA
LGTLPARYLGVPLLSGRLRASDCASLIQHITSRIRSWSARVLSFSGRLPLVRSVLRSFQVFWASVFVLPAEVHHAVDSLLMSYLWRGKEVGRGGAKVAWVDVCRSLEEGG
LNIQEESRGTVRVS