; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr12:9540955..9541809
RNA-Seq ExpressionPI0025481
SyntenyPI0025481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038999.1 envelope-like protein [Cucumis melo var. makuwa]3.6e-1439.1Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HV +FGVKILI  PR    ++   +  VLTT++AP P S+ LSLSY LFQG HVP+I + MHP                DG  +   L S+I+  L+
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+ LI+ L E    VD+++  L    PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

KAA0053603.1 uncharacterized protein E6C27_scaffold190G001780 [Cucumis melo var. makuwa]1.0e-1338.35Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HVETFGVKI I   R   S++   +  +LT NDAP P  + LSLSY LFQGSHVP I + M P  +        V    +G  +   L S+I+ + +
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+  I+ L      VDS++  L  L+PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

KAA0059174.1 F5J5.1 [Cucumis melo var. makuwa]8.0e-1437.68Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI
        +  HV +FGVK+ I  PR    ++   + +VLTT+DAP P  + LSLSY LFQGSHVP+I + ++      S  P    M      +DG  +   L S+I
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI

Query:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
        L  L+ +S SL  +I  + E H  +DS++  L    PS
Subjt:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

TYK19190.1 uncharacterized protein E5676_scaffold522G001260 [Cucumis melo var. makuwa]6.1e-1439.1Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HVETFGVKI I   R   S++   +  +LT NDAP P  + LSLSY LFQGSHVP I + M P  +        V    +G  +   L S+I+ +L 
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+  I+ L      VDS++  L  L+PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

TYK19345.1 F5J5.1 [Cucumis melo var. makuwa]8.0e-1437.68Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI
        +  HV +FGVK+ I  PR    ++   + +VLTT+DAP P  + LSLSY LFQGSHVP+I + ++      S  P    M      +DG  +   L S+I
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI

Query:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
        L  L+ +S SL  +I  + E H  +DS++  L    PS
Subjt:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

TrEMBL top hitse value%identityAlignment
A0A5A7TCJ0 Envelope-like protein1.7e-1439.1Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HV +FGVKILI  PR    ++   +  VLTT++AP P S+ LSLSY LFQG HVP+I + MHP                DG  +   L S+I+  L+
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+ LI+ L E    VD+++  L    PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

A0A5A7UCJ0 Uncharacterized protein5.1e-1438.35Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HVETFGVKI I   R   S++   +  +LT NDAP P  + LSLSY LFQGSHVP I + M P  +        V    +G  +   L S+I+ + +
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+  I+ L      VDS++  L  L+PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

A0A5A7UVR7 F5J5.13.9e-1437.68Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI
        +  HV +FGVK+ I  PR    ++   + +VLTT+DAP P  + LSLSY LFQGSHVP+I + ++      S  P    M      +DG  +   L S+I
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI

Query:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
        L  L+ +S SL  +I  + E H  +DS++  L    PS
Subjt:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

A0A5D3D6T2 Uncharacterized protein3.0e-1439.1Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS
        +  HVETFGVKI I   R   S++   +  +LT NDAP P  + LSLSY LFQGSHVP I + M P  +        V    +G  +   L S+I+ +L 
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLS

Query:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
         +S +L+  I+ L      VDS++  L  L+PS
Subjt:  TKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

A0A5D3D755 F5J5.13.9e-1437.68Show/hide
Query:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI
        +  HV +FGVK+ I  PR    ++   + +VLTT+DAP P  + LSLSY LFQGSHVP+I + ++      S  P    M      +DG  +   L S+I
Subjt:  MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRM-----PNDGMLLPPTLGSQI

Query:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS
        L  L+ +S SL  +I  + E H  +DS++  L    PS
Subjt:  LQLLSTKSGSLNGLIHTLFEHHAVVDSMLHSLTVLLPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGAGCATGTTGAGACCTTTGGGGTGAAGATTCTCATCTGCTTTCCTCGCTTACTGTGTAGTATCATGTTTGCTCAGCATTCGTCTGTGTTAACTACGAATGATGC
ACCTAGTCCAACCTCTAGGAATCTTAGTCTTAGCTACTGTCTGTTTCAAGGGTCTCATGTTCCTGAAATTGCTTATAGCATGCATCCTCTGTGTCATGCTGACTCAAATC
TCCCTCCTGGTGTTCGGATGCCAAATGATGGTATGTTGCTCCCTCCTACCTTGGGCTCTCAGATACTGCAGCTCCTTTCCACTAAGTCTGGTTCTCTGAATGGTCTCATT
CACACCCTCTTTGAGCATCATGCTGTTGTTGATTCCATGCTCCACTCCCTTACTGTGTTGCTTCCCTCTTTCAGGGATGCTTTCGCTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACGAGCATGTTGAGACCTTTGGGGTGAAGATTCTCATCTGCTTTCCTCGCTTACTGTGTAGTATCATGTTTGCTCAGCATTCGTCTGTGTTAACTACGAATGATGC
ACCTAGTCCAACCTCTAGGAATCTTAGTCTTAGCTACTGTCTGTTTCAAGGGTCTCATGTTCCTGAAATTGCTTATAGCATGCATCCTCTGTGTCATGCTGACTCAAATC
TCCCTCCTGGTGTTCGGATGCCAAATGATGGTATGTTGCTCCCTCCTACCTTGGGCTCTCAGATACTGCAGCTCCTTTCCACTAAGTCTGGTTCTCTGAATGGTCTCATT
CACACCCTCTTTGAGCATCATGCTGTTGTTGATTCCATGCTCCACTCCCTTACTGTGTTGCTTCCCTCTTTCAGGGATGCTTTCGCTAGTTAG
Protein sequenceShow/hide protein sequence
MYEHVETFGVKILICFPRLLCSIMFAQHSSVLTTNDAPSPTSRNLSLSYCLFQGSHVPEIAYSMHPLCHADSNLPPGVRMPNDGMLLPPTLGSQILQLLSTKSGSLNGLI
HTLFEHHAVVDSMLHSLTVLLPSFRDAFAS