; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025507 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025507
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr09:6027807..6028596
RNA-Seq ExpressionPI0025507
SyntenyPI0025507
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.4e-6867.28Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+ HL+GLIE  +D+SLTGPHAVD A E VGTS+TPV +  E
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  +PSSKE   PKA L+ V S H  L  S+ PL  S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.9e-6967.74Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EVKE +++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+ HL+GLIE  +D+SLTGPHAVD A E VGTS+TPV +  E
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  NPSSKE   PKA L+ V S H  LK S+ PLD S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEI  V
Subjt:  RTPFEYIPRLRPEIAKV

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]1.8e-6667.28Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EV EH  +SDS++ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+  L+GLIE  +D+SLTGPHAVD A E VGTS+TPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  +PSSKE   PKA L+ V STH  LK S+ PL  S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]6.0e-6766.82Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP    EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP+ LSPL+ HL+GLIE  +D+SL GPHAVD A E VGTSKTPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V EKD+E  +P SKE   PKA L+ V S H  LK S+ PL  S K+     EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RT FEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]6.0e-6766.82Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP    EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP+ LSPL+ HL+GLIE  +D+SL GPHAVD A E VGTSKTPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V EKD+E  +P SKE   PKA L+ V S H  LK S+ PL  S K+     EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RT FEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein7.0e-6967.28Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+ HL+GLIE  +D+SLTGPHAVD A E VGTS+TPV +  E
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  +PSSKE   PKA L+ V S H  L  S+ PL  S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

A0A5A7TX42 Uncharacterized protein1.4e-6967.74Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EVKE +++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+ HL+GLIE  +D+SLTGPHAVD A E VGTS+TPV +  E
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  NPSSKE   PKA L+ V S H  LK S+ PLD S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEI  V
Subjt:  RTPFEYIPRLRPEIAKV

A0A5A7U8X8 PMD domain-containing protein8.5e-6767.28Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP  + EV EH  +SDS++ DRHWKRPLKKAK SGD   GRG +A+E+P+VP PLSPL+  L+GLIE  +D+SLTGPHAVD A E VGTS+TPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V  KD+E  +PSSKE   PKA L+ V STH  LK S+ PL  S KQ +   EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RTPFEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

A0A5A7V2J6 Uncharacterized protein2.9e-6766.82Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP    EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP+ LSPL+ HL+GLIE  +D+SL GPHAVD A E VGTSKTPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V EKD+E  +P SKE   PKA L+ V S H  LK S+ PL  S K+     EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RT FEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

A0A5D3BW91 Uncharacterized protein2.9e-6766.82Show/hide
Query:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE
        MAP    EVKEH+++SDSS+ DRHWKRPLKKAK SGD   GRG +A+E+P+VP+ LSPL+ HL+GLIE  +D+SL GPHAVD A E VGTSKTPV + AE
Subjt:  MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAE

Query:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM
        Q  RP ALL+EIRR KM V EKD+E  +P SKE   PKA L+ V S H  LK S+ PL  S K+     EPSQW+GEKVVSNFFQKTALCMWEDI+DKIM
Subjt:  QLSRPPALLKEIRRDKMKVNEKDVEKSNPSSKE---PKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIM

Query:  RTPFEYIPRLRPEIAKV
        RT FEYIPRLRPEIA V
Subjt:  RTPFEYIPRLRPEIAKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTATCCACGATAGAGAGGTCAAGGAACATAGAGAGCAGAGCGATAGCAGCAGAGGTGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCATCAGGCGA
TGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAACGTTCCAACACCATTGTCACCTTTGGACGGTCATCTTCAAGGACTTATAGAGATATGTACTGATGACT
CTCTGACAGGGCCCCATGCCGTGGATTTAGCCCTTGAAGGAGTTGGTACTTCAAAGACACCAGTTGCTAGATTGGCTGAACAACTCTCACGTCCTCCTGCTCTTCTCAAG
GAGATTCGTCGGGACAAGATGAAGGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCAAAGCGCCTTTAGAGAATGTCAAATCCACACATACGTC
TCTCAAGATTTCCAAGCCGCCTTTAGACACTTCGAGGAAGCAGATAGTAGGACCTCTTGAGCCCTCTCAGTGGATTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAA
CGGCCTTATGCATGTGGGAGGACATTCGAGACAAGATTATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTGAAAGGATTGAAGCCCTTA
CGAAGCGGAATAAATTCACAGAATCTTTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTATCCACGATAGAGAGGTCAAGGAACATAGAGAGCAGAGCGATAGCAGCAGAGGTGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCATCAGGCGA
TGATTCATGTGGAAGAGGTTCAACTGCTATGGAAATTCCTAACGTTCCAACACCATTGTCACCTTTGGACGGTCATCTTCAAGGACTTATAGAGATATGTACTGATGACT
CTCTGACAGGGCCCCATGCCGTGGATTTAGCCCTTGAAGGAGTTGGTACTTCAAAGACACCAGTTGCTAGATTGGCTGAACAACTCTCACGTCCTCCTGCTCTTCTCAAG
GAGATTCGTCGGGACAAGATGAAGGTGAATGAAAAAGATGTTGAAAAATCAAATCCTTCGTCCAAAGAACCCAAAGCGCCTTTAGAGAATGTCAAATCCACACATACGTC
TCTCAAGATTTCCAAGCCGCCTTTAGACACTTCGAGGAAGCAGATAGTAGGACCTCTTGAGCCCTCTCAGTGGATTGGTGAAAAGGTAGTGTCAAACTTCTTTCAGAAAA
CGGCCTTATGCATGTGGGAGGACATTCGAGACAAGATTATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTGAAAGGATTGAAGCCCTTA
CGAAGCGGAATAAATTCACAGAATCTTTTTCAATAA
Protein sequenceShow/hide protein sequence
MAPIHDREVKEHREQSDSSRGDRHWKRPLKKAKASGDDSCGRGSTAMEIPNVPTPLSPLDGHLQGLIEICTDDSLTGPHAVDLALEGVGTSKTPVARLAEQLSRPPALLK
EIRRDKMKVNEKDVEKSNPSSKEPKAPLENVKSTHTSLKISKPPLDTSRKQIVGPLEPSQWIGEKVVSNFFQKTALCMWEDIRDKIMRTPFEYIPRLRPEIAKVKGLKPL
RSGINSQNLFQ