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PI0025516 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025516
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr06:5051525..5052154
RNA-Seq ExpressionPI0025516
SyntenyPI0025516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049498.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.1e-1164.18Show/hide
Query:  MLTCIQTTAEKRKKAS------------------LIPSLQILKGYTLLYRSLDYSICAVHLPHLFIG
        M+TCIQTTAE+ K AS                  LIPSLQILKGYTLL RS+DYSICAVHLPHLFIG
Subjt:  MLTCIQTTAEKRKKAS------------------LIPSLQILKGYTLLYRSLDYSICAVHLPHLFIG
KGN57113.1 hypothetical protein Csa_011647 [Cucumis sativus]1.3e-1163.24Show/hide
Query:  MLTCIQTTAEKRKKASLIP------------------SLQILKGYTLLYRSLDYSICAVHLPHLFIGV
        M+TCIQTTAE+ KKAS +P                  SLQIL+GYTLL+RSLDYSICAVHLPHLFIGV
Subjt:  MLTCIQTTAEKRKKASLIP------------------SLQILKGYTLLYRSLDYSICAVHLPHLFIGV
TrEMBL top hitse value%identityAlignment
A0A0A0L5T9 Uncharacterized protein6.4e-1263.24Show/hide
Query:  MLTCIQTTAEKRKKASLIP------------------SLQILKGYTLLYRSLDYSICAVHLPHLFIGV
        M+TCIQTTAE+ KKAS +P                  SLQIL+GYTLL+RSLDYSICAVHLPHLFIGV
Subjt:  MLTCIQTTAEKRKKASLIP------------------SLQILKGYTLLYRSLDYSICAVHLPHLFIGV
A0A5D3CY28 Pentatricopeptide repeat-containing protein2.4e-1164.18Show/hide
Query:  MLTCIQTTAEKRKKAS------------------LIPSLQILKGYTLLYRSLDYSICAVHLPHLFIG
        M+TCIQTTAE+ K AS                  LIPSLQILKGYTLL RS+DYSICAVHLPHLFIG
Subjt:  MLTCIQTTAEKRKKAS------------------LIPSLQILKGYTLLYRSLDYSICAVHLPHLFIG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACCTGCATACAAACGACTGCTGAGAAACGGAAGAAGGCTTCTCTGATTCCATCACTACAAATTCTCAAGGGTTACACTCTCTTATACCGCTCGCTTGATTATTC
AATTTGCGCGGTTCATCTGCCTCACTTGTTCATCGGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACCTGCATACAAACGACTGCTGAGAAACGGAAGAAGGCTTCTCTGATTCCATCACTACAAATTCTCAAGGGTTACACTCTCTTATACCGCTCGCTTGATTATTC
AATTTGCGCGGTTCATCTGCCTCACTTGTTCATCGGTGTATAA
Protein sequenceShow/hide protein sequence
MLTCIQTTAEKRKKASLIPSLQILKGYTLLYRSLDYSICAVHLPHLFIGV