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PI0025540 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025540
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein TIFY 5A-like
Genome locationchr12:6387836..6388562
RNA-Seq ExpressionPI0025540
SyntenyPI0025540
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019513.1 Protein TIFY 5A [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2869.83Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT-------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRF
        M++  N NLELCLSPP S+P+T        STS HNHI P   P PD TE+QA+AIIV+AT QMEAERR TTC ISS  +RVSMKSG ASPSMRRSLQRF
Subjt:  MDHFPNFNLELCLSPP-SAPTT-------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRF

Query:  LQKRKLRIQTLSPYTH
        LQKRK RIQTLSPY+H
Subjt:  LQKRKLRIQTLSPYTH

XP_004149668.1 protein TIFY 5A [Cucumis sativus]1.6e-3376.47Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT---------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAER-RSTTCRISSSAERVSMKSGEASPSMRRSL
        M+   NFNLELCLSPP S+P+T         +STSQ NHITPIG  TPDLTEIQAKAIIVQATRQMEAER R  TCRISSSAERV M +GEASPS+RRSL
Subjt:  MDHFPNFNLELCLSPP-SAPTT---------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAER-RSTTCRISSSAERVSMKSGEASPSMRRSL

Query:  QRFLQKRKLRIQTLSPYTH
        QRFLQKRKLRIQTLSPY H
Subjt:  QRFLQKRKLRIQTLSPYTH

XP_008444384.1 PREDICTED: protein TIFY 5A-like [Cucumis melo]2.7e-4180.83Show/hide
Query:  MDHFPNFNLELCLSPPS------------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS
        M+HFPNFNLELCLSPPS            A  ++S+SQHNHITPIG PTPDLTEIQAKAIIV+ATRQMEAERR TTCRISSSAERV M+SGEASPSMRRS
Subjt:  MDHFPNFNLELCLSPPS------------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS

Query:  LQRFLQKRKLRIQTLSPYTH
        LQRFLQKRKLRIQTLSPYTH
Subjt:  LQRFLQKRKLRIQTLSPYTH

XP_022927150.1 protein TIFY 5A-like [Cucurbita moschata]2.0e-2871.05Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT-----HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRFLQ
        M++  N NLELCLSPP S+P+T      STS HNHI P   P PD TE+QA+AIIV+AT QMEAERR TTC ISS  +RVSMKSG ASPSMRRSLQRFLQ
Subjt:  MDHFPNFNLELCLSPP-SAPTT-----HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRFLQ

Query:  KRKLRIQTLSPYTH
        KRK RIQTLSPY+H
Subjt:  KRKLRIQTLSPYTH

XP_023520316.1 protein TIFY 5A-like [Cucurbita pepo subsp. pepo]2.0e-2869.83Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT-------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRF
        M++  N NLELCLSPP S+P+T        STS HNHI P   P PDLTE+QA+AIIV+AT QME ERR TTC ISS  +RVSMKSG ASPSMRRSLQRF
Subjt:  MDHFPNFNLELCLSPP-SAPTT-------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRF

Query:  LQKRKLRIQTLSPYTH
        LQKRK RIQTLSPY+H
Subjt:  LQKRKLRIQTLSPYTH

TrEMBL top hitse value%identityAlignment
A0A0A0LX13 Uncharacterized protein7.6e-3476.47Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT---------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAER-RSTTCRISSSAERVSMKSGEASPSMRRSL
        M+   NFNLELCLSPP S+P+T         +STSQ NHITPIG  TPDLTEIQAKAIIVQATRQMEAER R  TCRISSSAERV M +GEASPS+RRSL
Subjt:  MDHFPNFNLELCLSPP-SAPTT---------HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAER-RSTTCRISSSAERVSMKSGEASPSMRRSL

Query:  QRFLQKRKLRIQTLSPYTH
        QRFLQKRKLRIQTLSPY H
Subjt:  QRFLQKRKLRIQTLSPYTH

A0A1S3BA64 protein TIFY 5A-like1.3e-4180.83Show/hide
Query:  MDHFPNFNLELCLSPPS------------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS
        M+HFPNFNLELCLSPPS            A  ++S+SQHNHITPIG PTPDLTEIQAKAIIV+ATRQMEAERR TTCRISSSAERV M+SGEASPSMRRS
Subjt:  MDHFPNFNLELCLSPPS------------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS

Query:  LQRFLQKRKLRIQTLSPYTH
        LQRFLQKRKLRIQTLSPYTH
Subjt:  LQRFLQKRKLRIQTLSPYTH

A0A6J1CG02 protein TIFY 5A-like9.9e-1856.3Show/hide
Query:  HFPNFNLELCLSPPSAP---------TTHSTSQHNHITPI-----GFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS
        H  + NLELCLSPP AP         TT STS H+H  P+     GFP  DLTE+QA+AII+ ATRQM  E R TTCR  S+ E+        S SM+RS
Subjt:  HFPNFNLELCLSPPSAP---------TTHSTSQHNHITPI-----GFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRS

Query:  LQRFLQKRKLRIQTLSPYT
        LQRFLQKRK RIQTL+PYT
Subjt:  LQRFLQKRKLRIQTLSPYT

A0A6J1EN30 protein TIFY 5A-like9.6e-2971.05Show/hide
Query:  MDHFPNFNLELCLSPP-SAPTT-----HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRFLQ
        M++  N NLELCLSPP S+P+T      STS HNHI P   P PD TE+QA+AIIV+AT QMEAERR TTC ISS  +RVSMKSG ASPSMRRSLQRFLQ
Subjt:  MDHFPNFNLELCLSPP-SAPTT-----HSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRFLQ

Query:  KRKLRIQTLSPYTH
        KRK RIQTLSPY+H
Subjt:  KRKLRIQTLSPYTH

A0A6J1KQP6 protein TIFY 5A-like7.1e-2464.41Show/hide
Query:  MDHFPNFNLELCLSPPS----------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQ
        M++  N NLELCLSPPS          A  + STS HNH  P   P  DLTE+QA+AIIV+A  QMEAERR TTC IS   E +SMKSG ASPSMRRSLQ
Subjt:  MDHFPNFNLELCLSPPS----------APTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQ

Query:  RFLQKRKLRIQTLSPYTH
        RFLQKRK RIQTLSPY+H
Subjt:  RFLQKRKLRIQTLSPYTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 84.7e-0442.25Show/hide
Query:  DLTEIQAKAIIVQATRQMEAERRSTTC---RISSSAERVSMKSGEASPSMRRSLQRFLQKRKLRIQTLSPY
        D+T +QA++II  A+R+M+ +  S        S+S     + + +A  SM++SLQ FLQKRK+RIQ  SPY
Subjt:  DLTEIQAKAIIVQATRQMEAERRSTTC---RISSSAERVSMKSGEASPSMRRSLQRFLQKRKLRIQTLSPY

AT2G34600.1 jasmonate-zim-domain protein 78.1e-0439.73Show/hide
Query:  DLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEA-----SPSMRRSLQRFLQKRKLRIQTLSPY
        DLT ++A AI+  A+R  + E +S + R S  ++  ++ +          SM+RSL  FLQKR LRIQ  SPY
Subjt:  DLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEA-----SPSMRRSLQRFLQKRKLRIQTLSPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACTTCCCCAACTTCAACTTGGAACTTTGTCTCTCTCCTCCTTCGGCCCCTACCACCCATTCAACTTCACAACACAACCATATCACTCCTATCGGATTCCCCAC
ACCTGATCTTACCGAGATCCAGGCAAAGGCAATAATAGTACAAGCCACGAGACAAATGGAGGCCGAGAGAAGATCCACGACATGTCGAATTAGTTCATCAGCAGAACGAG
TATCGATGAAGAGCGGGGAAGCTAGCCCCTCCATGAGGAGATCATTGCAGAGGTTTTTACAAAAGAGAAAGCTTCGCATTCAAACACTTTCACCCTACACTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCACTTCCCCAACTTCAACTTGGAACTTTGTCTCTCTCCTCCTTCGGCCCCTACCACCCATTCAACTTCACAACACAACCATATCACTCCTATCGGATTCCCCAC
ACCTGATCTTACCGAGATCCAGGCAAAGGCAATAATAGTACAAGCCACGAGACAAATGGAGGCCGAGAGAAGATCCACGACATGTCGAATTAGTTCATCAGCAGAACGAG
TATCGATGAAGAGCGGGGAAGCTAGCCCCTCCATGAGGAGATCATTGCAGAGGTTTTTACAAAAGAGAAAGCTTCGCATTCAAACACTTTCACCCTACACTCACTAACTT
TTCAAATTTTGGAATAATCCTGGCTTCTTAATTCTCTCTTCCCTTTTGTCATTTTTCTTCTTTTGCTAGGAGCTGAGTTTGTGTTTGGATTCTACGTTTTGTATTTGTAC
ATATATACTTGGAGCTTATTCATTTTCCAATACATTACTTCTTACATTTCTCAA
Protein sequenceShow/hide protein sequence
MDHFPNFNLELCLSPPSAPTTHSTSQHNHITPIGFPTPDLTEIQAKAIIVQATRQMEAERRSTTCRISSSAERVSMKSGEASPSMRRSLQRFLQKRKLRIQTLSPYTH