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PI0025542 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025542
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr04:31851583..31852899
RNA-Seq ExpressionPI0025542
SyntenyPI0025542
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]1.6e-5374.21Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG   SSS NS PSPMSA QY MDLGFT VTRS++R S I I S TESSTPPRPS NL+RPSGGV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTR
        T +KRF+PRPEIK YFQK + +YDPIIEPEYQSLTL+E +SKIF + FNFLPEDL+K +
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTR

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]5.3e-5475.16Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+ +SSS NSAPSPMSADQYAMDLGFT VTRS++R SGI I   TESSTPPRPSANL+RP G V QM+P ASP SN +SSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRK
        TP+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E +SKIF E FNFLPEDLRK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]4.5e-6177.65Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+   SS NSAPSP+SADQYAMDLGFTTVTR  +RS GI I S TESSTPPRPS NL+RPS GV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTK
        TP+KRF+PRPEIK YFQK + +YDPIIE EYQSLT +ET+SKIF E FNFL EDLRKTRKFYEFIL DTK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTK

KAA0066421.1 hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa]2.0e-5380.29Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKKYFQKQVAIYD
        MSADQYAMDLGFTTVTRS++RSS IRIESSTESSTPPRPSANL+RP GG  QMRP ASP SN ESSTPPTTYSQ VTP+KRF+PRPEIK YFQK + +YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKKYFQKQVAIYD

Query:  PIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKF
         IIEPEYQS+TL++T+SKIFL+ FN LPEDLRKTR F
Subjt:  PIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKF

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.0e-6459.55Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+C SSS NSAPSPMS DQYAMDLG+TTV +S+++SSGI I S  ESSTPPRPS NL+ P G V QMR SASP SN ESST PTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQRK
        TP+K+F+PR EIK YFQK + IYDPIIE EYQ                                                        +NG LQDIDQRK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQRK

Query:  NAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEFASPEYDLNDPFLDSQP
        NA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A S IQEDEE    EYDL+DPFLDSQP
Subjt:  NAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEFASPEYDLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.2e-6177.65Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+   SS NSAPSP+SADQYAMDLGFTTVTR  +RS GI I S TESSTPPRPS NL+RPS GV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTK
        TP+KRF+PRPEIK YFQK + +YDPIIE EYQSLT +ET+SKIF E FNFL EDLRKTRKFYEFIL DTK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTK

A0A5D3BI61 Uncharacterized protein9.5e-6559.55Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+C SSS NSAPSPMS DQYAMDLG+TTV +S+++SSGI I S  ESSTPPRPS NL+ P G V QMR SASP SN ESST PTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQRK
        TP+K+F+PR EIK YFQK + IYDPIIE EYQ                                                        +NG LQDIDQRK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQRK

Query:  NAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEFASPEYDLNDPFLDSQP
        NA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A S IQEDEE    EYDL+DPFLDSQP
Subjt:  NAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEFASPEYDLNDPFLDSQP

A0A5D3BM67 Uncharacterized protein9.8e-5480.29Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKKYFQKQVAIYD
        MSADQYAMDLGFTTVTRS++RSS IRIESSTESSTPPRPSANL+RP GG  QMRP ASP SN ESSTPPTTYSQ VTP+KRF+PRPEIK YFQK + +YD
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAVTPEKRFIPRPEIKKYFQKQVAIYD

Query:  PIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKF
         IIEPEYQS+TL++T+SKIFL+ FN LPEDLRKTR F
Subjt:  PIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKF

A0A5D3E4J4 Uncharacterized protein2.6e-5475.16Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG+ +SSS NSAPSPMSADQYAMDLGFT VTRS++R SGI I   TESSTPPRPSANL+RP G V QM+P ASP SN +SSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRK
        TP+KRF+PRP+IK YFQK + +YDP IE EYQSLTL+E +SKIF E FNFLPEDLRK
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRK

E5GCE6 Uncharacterized protein7.5e-5474.21Show/hide
Query:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV
        +GR  STSSKG   SSS NS PSPMSA QY MDLGFT VTRS++R S I I S TESSTPPRPS NL+RPSGGV QMRP ASP SN ESSTPPTTYSQAV
Subjt:  KGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAV

Query:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTR
        T +KRF+PRPEIK YFQK + +YDPIIEPEYQSLTL+E +SKIF + FNFLPEDL+K +
Subjt:  TPEKRFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTTCGTGGCAAAGGAAGAGCAATCTCTACCTCTTCAAAGGGCAGCTGCATATCTTCTTCACTAAATTCTGCACCCTCACCCATGAGTGCGGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCTAGATCGTCCGGCATACGGATTGAATCTTCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCATCTGGCGGAGTAACTCAAATGAGGCCTTCTGCCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACATATTCTCAAGCCGTCACTCCAGAAAAA
CGTTTCATACCAAGGCCCGAGATAAAAAAATATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCGATGAGACAATTTC
AAAAATCTTCCTTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACTAGAAAATTTTACGAGTTTATTCTAGTAGACACCAAGTCTGTAGAAATAACTCATCATG
CCACCATTAAACACATGAAAGAATGGTTTGCAGAGAATGGCTATCTTCAAGACATTGATCAGAGAAAGAACGCAGAGTTCTTAAATGATAAATCTAAACTACTTGCAGCA
CTGGCACAGGCAACAACTGATGCTGATTTTCAAAGATTATTATCAACTGCAGTAAACGCTTCTTCAAGTTCCAAATCAGCATCCTCTTCCATACAGGAAGATGAAGAATT
TGCAAGTCCGGAGTACGATTTGAACGATCCATTTCTCGACTCACAACCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTTCGTGGCAAAGGAAGAGCAATCTCTACCTCTTCAAAGGGCAGCTGCATATCTTCTTCACTAAATTCTGCACCCTCACCCATGAGTGCGGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCTAGATCGTCCGGCATACGGATTGAATCTTCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAATCTTG
TCCGTCCATCTGGCGGAGTAACTCAAATGAGGCCTTCTGCCTCTCCTCAATCAAATATGGAGTCATCTACTCCTCCTACGACATATTCTCAAGCCGTCACTCCAGAAAAA
CGTTTCATACCAAGGCCCGAGATAAAAAAATATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAACCAGAATATCAAAGTCTCACTCTCGATGAGACAATTTC
AAAAATCTTCCTTGAGGGCTTTAATTTCCTTCCAGAAGACCTCAGAAAAACTAGAAAATTTTACGAGTTTATTCTAGTAGACACCAAGTCTGTAGAAATAACTCATCATG
CCACCATTAAACACATGAAAGAATGGTTTGCAGAGAATGGCTATCTTCAAGACATTGATCAGAGAAAGAACGCAGAGTTCTTAAATGATAAATCTAAACTACTTGCAGCA
CTGGCACAGGCAACAACTGATGCTGATTTTCAAAGATTATTATCAACTGCAGTAAACGCTTCTTCAAGTTCCAAATCAGCATCCTCTTCCATACAGGAAGATGAAGAATT
TGCAAGTCCGGAGTACGATTTGAACGATCCATTTCTCGACTCACAACCTATGTGA
Protein sequenceShow/hide protein sequence
MSIVRGKGRAISTSSKGSCISSSLNSAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESSTESSTPPRPSANLVRPSGGVTQMRPSASPQSNMESSTPPTTYSQAVTPEK
RFIPRPEIKKYFQKQVAIYDPIIEPEYQSLTLDETISKIFLEGFNFLPEDLRKTRKFYEFILVDTKSVEITHHATIKHMKEWFAENGYLQDIDQRKNAEFLNDKSKLLAA
LAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEEFASPEYDLNDPFLDSQPM