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PI0025586 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025586
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr06:19614341..19614595
RNA-Seq ExpressionPI0025586
SyntenyPI0025586
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-2877.11Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE N+AT +K+ + GSS KT+VGPSQ+K KGKGKTPKN KGKKVAKGKCYHCN+ GHWL NCPKYL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

KAA0045181.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-2674.7Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE NVATT+K+ ++GSS KT+VGPSQ+K K KGK PKN KGKKVAKGKCYHCN++ HWL NC KYL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

KAA0046201.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-2571.43Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN
        M   K++E NVA T+K+ ++GSS KT+VGPS MKNK KGKTP N KGK VAKGKCYHCN++GHWL NCPKYL EKKAEKEAQ N
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN

TYK04285.1 gag/pol protein [Cucumis melo var. makuwa]5.5e-2672.62Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN
        MG GK+VE NV TT+K+ + GSS KT+VG   MK K KGKTPKN +GKKVAKGKCYHCN++GHWL NCPKYLTEKKA+KEAQ N
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN

TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]5.3e-2977.11Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE N+ATT+K+ + GSS KT+VGPSQ+K KGKGKTPKN KGKKVAKGKCYHCN++GHWL NCP+YL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein5.7e-2977.11Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE N+AT +K+ + GSS KT+VGPSQ+K KGKGKTPKN KGKKVAKGKCYHCN+ GHWL NCPKYL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

A0A5A7TUI5 Gag/pol protein7.0e-2774.7Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE NVATT+K+ ++GSS KT+VGPSQ+K K KGK PKN KGKKVAKGKCYHCN++ HWL NC KYL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

A0A5A7TXW7 Gag/pol protein7.7e-2671.43Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN
        M   K++E NVA T+K+ ++GSS KT+VGPS MKNK KGKTP N KGK VAKGKCYHCN++GHWL NCPKYL EKKAEKEAQ N
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN

A0A5D3BYQ2 Gag/pol protein2.7e-2672.62Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN
        MG GK+VE NV TT+K+ + GSS KT+VG   MK K KGKTPKN +GKKVAKGKCYHCN++GHWL NCPKYLTEKKA+KEAQ N
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN

A0A5D3E1U5 Gag/pol protein2.6e-2977.11Show/hide
Query:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG
        MG GK+VE N+ATT+K+ + GSS KT+VGPSQ+K KGKGKTPKN KGKKVAKGKCYHCN++GHWL NCP+YL EKKAEKEAQG
Subjt:  MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGGGAAACAAGTGGAAGAAAATGTTGCTACCACTAAGAAAAAGTTTATAAAAGGATCGTCCTTTAAAACTAAAGTTGGGCCTTCACAAATGAAAAATAAGGG
AAAGGGGAAGACTCCCAAGAATGGTAAGGGAAAGAAAGTTGCGAAAGGTAAATGTTACCATTGCAACCAAAACGGGCATTGGTTAAGCAATTGCCCGAAATACCTTACTG
AGAAGAAAGCTGAGAAGGAAGCACAAGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGGGAAACAAGTGGAAGAAAATGTTGCTACCACTAAGAAAAAGTTTATAAAAGGATCGTCCTTTAAAACTAAAGTTGGGCCTTCACAAATGAAAAATAAGGG
AAAGGGGAAGACTCCCAAGAATGGTAAGGGAAAGAAAGTTGCGAAAGGTAAATGTTACCATTGCAACCAAAACGGGCATTGGTTAAGCAATTGCCCGAAATACCTTACTG
AGAAGAAAGCTGAGAAGGAAGCACAAGGAAACTAG
Protein sequenceShow/hide protein sequence
MGMGKQVEENVATTKKKFIKGSSFKTKVGPSQMKNKGKGKTPKNGKGKKVAKGKCYHCNQNGHWLSNCPKYLTEKKAEKEAQGN