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PI0025616 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025616
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr11:24362052..24363835
RNA-Seq ExpressionPI0025616
SyntenyPI0025616
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025990.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.8e-2439.34Show/hide
Query:  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLM--VICW-----------------------------
        Q +ELE YV+ +G I++ I P AEK IS H VRFN  IGV +R   PV C   ++V  EYIE++   + C+                             
Subjt:  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLM--VICW-----------------------------

Query:  ------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
              SN      +++++ +II AG+ C Y ++ SL+N +NQM+EL S PTP+G QPL RDEI E +LGRR  Y KGLG  P
Subjt:  ------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

KAA0035423.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.4e-2344.87Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICWSNERLTSRIEKNN----NSIIVAGQS
        +ELE++V  +G I ++I PGAEKPIS H VRF+  I V +R  FPV C   ++V  EYIE+       L V+ ++++ + S +E+      N+++   + 
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICWSNERLTSRIEKNN----NSIIVAGQS

Query:  C-FYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
          F  D+      +NQM+EL S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  C-FYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

KAA0038961.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.9e-2441.18Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICW-------SNERLTSRIEKNNNSIIVA
        +ELE++V  +G I ++I  GA+KPISPH VRF+ TIGV VR  FPV C   ++V  EYIE+       L+V+ +       SN   T  +++++ +II+A
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICW-------SNERLTSRIEKNNNSIIVA

Query:  GQSCFYKDNLSLVNNK-----------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
        G S FY D++S +  K                             NQM++L S PT +GSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  GQSCFYKDNLSLVNNK-----------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

KAA0046642.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.8e-2245.58Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLS
        +ELE YV  +  I ++I PGAEKPISPH VRF+  IGV VR  FP  C   ++V  EYIE++   + +     +   R+E    + + AG       + +
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLS

Query:  LVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
        + +  NQM+EL S PTP+GSQP S DEI + VLGRRP YSKGLG  P
Subjt:  LVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

TYK05628.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.1e-2136.68Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVICWSNERLTSRIEKN---------------------
        +ELE++V  +G I ++I PGAEKPISPHVVRF+  IG+ VR  FPV C   + V  EYIE L V+ +++  +   +E                       
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVICWSNERLTSRIEKN---------------------

Query:  --------NNSII-------------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
                 N+++                          +G   F +    L  +  NQM+EL S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  --------NNSII-------------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

TrEMBL top hitse value%identityAlignment
A0A5A7SII7 CACTA en-spm transposon protein4.3e-2439.34Show/hide
Query:  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLM--VICW-----------------------------
        Q +ELE YV+ +G I++ I P AEK IS H VRFN  IGV +R   PV C   ++V  EYIE++   + C+                             
Subjt:  QNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLM--VICW-----------------------------

Query:  ------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
              SN      +++++ +II AG+ C Y ++ SL+N +NQM+EL S PTP+G QPL RDEI E +LGRR  Y KGLG  P
Subjt:  ------SNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

A0A5A7SXY7 CACTA en-spm transposon protein2.1e-2344.87Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICWSNERLTSRIEKNN----NSIIVAGQS
        +ELE++V  +G I ++I PGAEKPIS H VRF+  I V +R  FPV C   ++V  EYIE+       L V+ ++++ + S +E+      N+++   + 
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICWSNERLTSRIEKNN----NSIIVAGQS

Query:  C-FYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
          F  D+      +NQM+EL S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  C-FYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

A0A5A7TBG7 CACTA en-spm transposon protein1.9e-2441.18Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICW-------SNERLTSRIEKNNNSIIVA
        +ELE++V  +G I ++I  GA+KPISPH VRF+ TIGV VR  FPV C   ++V  EYIE+       L+V+ +       SN   T  +++++ +II+A
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEM-------LMVICW-------SNERLTSRIEKNNNSIIVA

Query:  GQSCFYKDNLSLVNNK-----------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
        G S FY D++S +  K                             NQM++L S PT +GSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  GQSCFYKDNLSLVNNK-----------------------------NQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

A0A5A7TG94 CACTA en-spm transposon protein2.0e-2136.68Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVICWSNERLTSRIEKN---------------------
        +ELE++V  +G I ++I PGAEKPISPHVVRF+  IG+ VR  FPV C   + V  EYIE L V+ +++  +   +E                       
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVICWSNERLTSRIEKN---------------------

Query:  --------NNSII-------------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
                 N+++                          +G   F +    L  +  NQM+EL S PTPEGSQPLS DEI + VLGRRP YSKGLG  P
Subjt:  --------NNSII-------------------------VAGQSCFYKDNLSLVNN-KNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

A0A5A7TT86 CACTA en-spm transposon protein1.4e-2245.58Show/hide
Query:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLS
        +ELE YV  +  I ++I PGAEKPISPH VRF+  IGV VR  FP  C   ++V  EYIE++   + +     +   R+E    + + AG       + +
Subjt:  IELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEML---MVICWSNERLTSRIEKNNNSIIVAGQSCFYKDNLS

Query:  LVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP
        + +  NQM+EL S PTP+GSQP S DEI + VLGRRP YSKGLG  P
Subjt:  LVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTTGCAGAGTTTGGCGAGCTGATGAATGTGGTAAAGCACGCGAGCTTGGTAAGTCAGCTGAATATGAGCCTTGGTGATTTGGTGCTGAATGAGGCGTGCGGTGA
AGACACACAAGCACTACAGAACATTGAGTTGGAGAAATATGTCAACAAACATGGAAACATTACAATCTCCATCACACCAGGGGCAGAGAAGCCAATTTCTCCACATGTTG
TTCGGTTCAATAACACAATTGGTGTGGCGGTCAGAGATTGTTTTCCAGTCTGGTGTCATACAAATTCAGAGGTTCCACATGAATATATCGAGATGCTAATGGTGATTTGT
TGGAGCAATGAAAGACTAACAAGCAGAATAGAGAAAAACAACAATTCCATCATAGTAGCGGGTCAAAGTTGTTTCTACAAAGACAATCTAAGCTTAGTGAACAACAAGAA
TCAAATGGTAGAATTACTATCGACACCCACTCCAGAAGGTTCTCAACCACTATCAAGAGACGAAATATACGAGATAGTTTTGGGTAGGCGACCTAGTTATTCAAAAGGTC
TTGGGTTGGTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTTGCAGAGTTTGGCGAGCTGATGAATGTGGTAAAGCACGCGAGCTTGGTAAGTCAGCTGAATATGAGCCTTGGTGATTTGGTGCTGAATGAGGCGTGCGGTGA
AGACACACAAGCACTACAGAACATTGAGTTGGAGAAATATGTCAACAAACATGGAAACATTACAATCTCCATCACACCAGGGGCAGAGAAGCCAATTTCTCCACATGTTG
TTCGGTTCAATAACACAATTGGTGTGGCGGTCAGAGATTGTTTTCCAGTCTGGTGTCATACAAATTCAGAGGTTCCACATGAATATATCGAGATGCTAATGGTGATTTGT
TGGAGCAATGAAAGACTAACAAGCAGAATAGAGAAAAACAACAATTCCATCATAGTAGCGGGTCAAAGTTGTTTCTACAAAGACAATCTAAGCTTAGTGAACAACAAGAA
TCAAATGGTAGAATTACTATCGACACCCACTCCAGAAGGTTCTCAACCACTATCAAGAGACGAAATATACGAGATAGTTTTGGGTAGGCGACCTAGTTATTCAAAAGGTC
TTGGGTTGGTTCCTTAA
Protein sequenceShow/hide protein sequence
MMLAEFGELMNVVKHASLVSQLNMSLGDLVLNEACGEDTQALQNIELEKYVNKHGNITISITPGAEKPISPHVVRFNNTIGVAVRDCFPVWCHTNSEVPHEYIEMLMVIC
WSNERLTSRIEKNNNSIIVAGQSCFYKDNLSLVNNKNQMVELLSTPTPEGSQPLSRDEIYEIVLGRRPSYSKGLGLVP