CuGenDBv2

Gene ID	PI0025636
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Midasin
Genome location	chr11:7176650..7195054
RNA-Seq Expression	PI0025636
Synteny	PI0025636
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0059414.1 midasin [Cucumis melo var. makuwa]

3.5e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

TYK03913.1 midasin [Cucumis melo var. makuwa]

3.5e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

XP_008462334.2 PREDICTED: LOW QUALITY PROTEIN: midasin [Cucumis melo]

3.5e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

XP_011659635.1 midasin [Cucumis sativus]

1.3e-64

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGLLMSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        IIEMLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIE DSW ALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

XP_038899709.1 midasin isoform X2 [Benincasa hispida]

3.1e-58

67.91

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  +KDFGGLL+SSLDAKLAPEH LRLCLEH+    FPERVAGKYNFYKD NPSMIANMVK+LDPL QRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        IIEMLQ FS DTPVAKALSGLQ+LVNK +            +  E   + +  +QLETI+ELVSSWKK+EFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCN0 Midasin

6.4e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGLLMSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        IIEMLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIE DSW ALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

A0A1S3CGN9 Midasin

1.7e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

A0A5A7UWF5 Midasin

1.7e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

A0A5D3BVY6 Midasin

1.7e-65

73.8

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S ++ +  LKDFGGL MSSLDAKLAPEH LRLCLEHD+NWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLL+D+EEHHVLQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        II+MLQNFS DTPVAKALSGLQILVNK +            +  E   + +  +QLETIIELVSSWKKIEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

A0A6J1DE15 Midasin

7.8e-55

65.78

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Query:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
        RL     S +  +L +KDFGGLL+SSLDA+LAPEH LRLCLEH+ N   PER AGKYNFYKDSNPSMIA MVK+L PL QRVSSLL+D  EHH+LQKILD
Subjt:  RLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD

Query:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE
        IIEMLQNFS DTPVAKALSGLQILVN  +            +  E   + +  +QLE I+ELVSSWK IEFDSWPALLDE + DQ E
Subjt:  IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLE

SwissProt top hits

e value

%identity

Alignment

A0A1P8AUY4 Midasin

1.2e-33

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Query:  RLSLIPHRRLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEH
        R  +   RRL     S  + +  +K   GL  SSLDAKL PEH LRLCLE+ KN+    + A KYNFYKD +   +  MVK L PL+QR++SLL + E+H
Subjt:  RLSLIPHRRLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEH

Query:  HVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQK-----QLETIIELVSSWKKIEFDSWPALLDEEELDQLE
          LQK+  +++ML      TP+AKALSGLQ L+                 CK    Q  G K      LE II L SSW+K+EF+ WP LLDE + DQ E
Subjt:  HVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQK-----QLETIIELVSSWKKIEFDSWPALLDEEELDQLE

Q869L3 Midasin

8.7e-11

34.13

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Query:  YNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQL
        YN Y+DSN S I  + + L   R+RV  LLV+Y E   L  ++ +I+ L  +    P+AK L+GL++L+ K        L+  S + K    QN     L
Subjt:  YNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQL

Query:  ETIIELVSSWKKIEFDSWPALLDEEE
          I  L+  W+K+E +SWP++   +E
Subjt:  ETIIELVSSWKKIEFDSWPALLDEEE

Q9NU22 Midasin

2.5e-10

26.42

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Query:  FGGLLMSSLDAKLAPEHALRLCLEHDKNWG-----FPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILDIIEMLQNFSPDTP
        F  L+   L+ +L     L   L H+  +G        +  G Y+FY+  N         VL    + VS LL D+ EH  L+++L +++ +++F   +P
Subjt:  FGGLLMSSLDAKLAPEHALRLCLEHDKNWG-----FPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILDIIEMLQNFSPDTP

Query:  VAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLEKLDK---ASASCKERHYQNTGQKQLE
        ++K L+GL+IL+ K + D  E   +A +           +K L+ I +++  W+K+E + W   LD       EK  K   +     E+H Q   ++Q +
Subjt:  VAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLEKLDK---ASASCKERHYQNTGQKQLE

Query:  ----TIIELVSS
            T++ LVS+
Subjt:  ----TIIELVSS

Arabidopsis top hits

e value

%identity

Alignment

AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding

8.9e-35

Show/hide

Query:  RLSLIPHRRLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEH
        R  +   RRL     S  + +  +K   GL  SSLDAKL PEH LRLCLE+ KN+    + A KYNFYKD +   +  MVK L PL+QR++SLL + E+H
Subjt:  RLSLIPHRRLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEH

Query:  HVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQK-----QLETIIELVSSWKKIEFDSWPALLDEEELDQLE
          LQK+  +++ML      TP+AKALSGLQ L+                 CK    Q  G K      LE II L SSW+K+EF+ WP LLDE + DQ E
Subjt:  HVLQKILDIIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQK-----QLETIIELVSSWKKIEFDSWPALLDEEELDQLE

Sequences

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CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGTTACGTCTCTCCCTAATTCCTCACCGGCGCCTCCCTCAGATCCGCCACTCGTTATCTATGAAGATCCTCTTCCTTAAAGATTTTGGTGGTTTGTTGATGTCAAGTCT
GGATGCCAAACTTGCACCAGAGCACGCCTTACGTCTGTGTTTGGAGCATGACAAAAACTGGGGTTTTCCTGAAAGAGTAGCTGGAAAATATAATTTTTACAAGGATTCAA
ATCCTTCAATGATAGCAAACATGGTGAAGGTACTTGATCCTCTTCGACAACGTGTTTCTTCACTTTTGGTTGATTACGAAGAACATCATGTTCTTCAGAAGATCTTGGAT
ATAATTGAAATGCTTCAAAATTTTTCTCCGGACACTCCAGTAGCAAAGGCTTTATCTGGTTTGCAAATTCTGGTTAACAAGGAGGAGCTGGACCAGCTTGAAAAATTAGA
CAAAGCATCAGCATCATGTAAAGAGAGACATTACCAGAACACGGGTCAAAAGCAATTGGAGACTATAATTGAATTAGTTTCATCATGGAAAAAGATCGAGTTCGACTCAT
GGCCAGCATTGCTCGATGAGGAGGAGCTGGACCAGCTTGAAAAATTAGACAAAGCATCAGCATCATGTAAAGAGAGACATTACCAGAACACGGGTCAAAAGCAATTGGAG
ACTATAATTGAATTAGTTTCATCATGGAAAAAGATCGAGTTTGACTCATGGCCAGCATTGCTCGATGAGGAGGAGCTGGACCAGCTTGAAAAATTAGACAAAGCATCAGC
ATCATGTAAAGAGAGACATTACCAGAACACGGGTCAAAAGCAATTGGAGACTATAATTGAATTAGTTTCATCATGGAAAAAGATCGAGTTTGACTCATGGCTAGCATTGC
TCGATGAGGTGCAGGACCACTACGAACTCAACTGTGGAAAGTTTCTTCACAAGACATCATTGCGATGATCAAGGAGCAAGATGGGTTTTGAAGTTTTGATCTAAAAAAGG
TTGGATAATTAAATGTATTGTTTGGCCATCTCTGGGAGGAAGAAAATTTATTCAGGTAAAGTTTGAGCTTTTTGGAAAGATCTTTAGACAAGCATGCCAATACCTCCATC
CTATGCGTGTATAATCTCAGGGAAGGCTTTCTGTTCCTTTTGCTTTCGTCAATGCATTTTATTTCTCTTTACGTCGAAGACAATGCATTGTTTTAATCTGAGACAATGCA
TTGTTTAATCTGAGCCTCGTACTTTTTATCAACATAACATGTGATTGAATGAATGGAGAACATTCTTTGTGATCAGTGTTAGTGATATATAATTAAATTTGTCTTCAACC
ACTAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATATGATTGTTTAGAGACGAATTTTCCAACATCCCACACCGTCGTCAGCCTTAGATCTACTTCATTCTATTCTACT
TCCTGTTCCTGCATTTCTAAGTTTCATTAATGGCGAAACTGGAGCCGCTTGACGGGGTAGCCAAAGATAACAATGTGTCTACGAAGAAGCAGAAGAGAAATCATGGGTAT
ACTTCATTTTTCGTCGTCGTGGATTACCTTTTCCTATTCATCTTTTTTGGGTTCCTCTGCTTCATCCTCTTATGCATTGTTTTAATCTGAGACAATGCATTGTTTAATCT
GAGCCTCGTACTTTTTATCAACATAACATGTGATTGAATGAATGGAGAACATTCTTTGTGATCAGTGTTAGTGATATATAATTAAATTTGTCTTCAACCACTAGCTTAAG
CTTTTGGGTGAATTGGTGGTTTAATATGATTGTTTAGAGACGAATTTTCCAACATCCCACACCGTC

Protein sequence

Show/hide protein sequence

MLRLSLIPHRRLPQIRHSLSMKILFLKDFGGLLMSSLDAKLAPEHALRLCLEHDKNWGFPERVAGKYNFYKDSNPSMIANMVKVLDPLRQRVSSLLVDYEEHHVLQKILD
IIEMLQNFSPDTPVAKALSGLQILVNKEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWPALLDEEELDQLEKLDKASASCKERHYQNTGQKQLE
TIIELVSSWKKIEFDSWPALLDEEELDQLEKLDKASASCKERHYQNTGQKQLETIIELVSSWKKIEFDSWLALLDEVQDHYELNCGKFLHKTSLR

PI0025636 (gene) of Melon (PI 482460) v1 genome