; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025656 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025656
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationchr02:18403147..18404773
RNA-Seq ExpressionPI0025656
SyntenyPI0025656
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653078.1 hypothetical protein Csa_020050 [Cucumis sativus]5.5e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

XP_008465019.2 PREDICTED: uncharacterized protein LOC103502740 isoform X1 [Cucumis melo]5.5e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

XP_008465020.2 PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]5.5e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

XP_011656267.2 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]5.5e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

XP_038880143.1 zinc finger Ran-binding domain-containing protein 2-like isoform X1 [Benincasa hispida]3.5e-8699.29Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTT SCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein1.2e-84100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X21.2e-84100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

A0A1S3CNB1 uncharacterized protein LOC103502740 isoform X12.7e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

A0A1S3CPF6 uncharacterized protein LOC103502740 isoform X32.7e-87100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGHLGV

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X31.2e-84100Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c5.8e-0726.15Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGW
        GDW C +C   NF++R +C RC +P       +T S     +   G+ Y    S    NY    +       +S      G   +              +
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYN-KTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGW

Query:  KSGDWICPRMGCGVHNYASRMECFKCKTPR
        ++GDW C   GCG HN+A  + C +C   R
Subjt:  KSGDWICPRMGCGVHNYASRMECFKCKTPR

O95218 Zinc finger Ran-binding domain-containing protein 23.2e-0537.08Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q19QU3 Zinc finger Ran-binding domain-containing protein 23.2e-0537.08Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 26.4e-0638.2Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    CG  N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q9R020 Zinc finger Ran-binding domain-containing protein 23.2e-0537.08Show/hide
Query:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+       A MM  G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMM--GSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein2.8e-0427.71Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRC---GAFKSVYPGDY
        GDW C  C+ +NF K   C RC  + +           +      GDW C T  C   N++    C RC      + + PG++
Subjt:  GDWICNVCQNVNFKKREACHRCG-YPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRC---GAFKSVYPGDY

AT2G17975.1 zinc finger (Ran-binding) family protein3.4e-1835.57Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------
        GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYASR  C +CG  K V        PG                
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSV-------YPG----------------

Query:  -DYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC
         D    ++      + AS+   W+SGDWIC    CG HNY+SR++C KC
Subjt:  -DYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein3.7e-5764.75Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-A
        MSW+ GDW+C  CQ+ NFKKRE+C +CGYPK+GG D STY YN+TE +AGDWYC  ++CG+HNYASR +C+RCG  K  Y    YGA M+    YG+D A
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-A

Query:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG
        + PPGWK+GDW+CPR+GCGVHNYASR ECFKCKT RD+G
Subjt:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDFG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein9.8e-3442.31Show/hide
Query:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG
        GDW C  C ++NF++R++C RCG             +  +GG   S + +   ++   GDWYCT  +CG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRCG-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMG

Query:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGH
           + +D   S  PG      WKSGDWIC R+GC  HN+ASRMECF+C  PRDF +
Subjt:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFGH

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein4.5e-3137.11Show/hide
Query:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDWYC    CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCGYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD
                G +  G    G   +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Subjt:  -------YGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGTATGGAGGCCCAGACCC
ATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCCAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCCGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTCACTTGGGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
CGGGAATCGCGTCACGAGGAAACCATCTATGAAAAGGCAAGGGAATAAAAAGAAAAACCACCATAAAATGGACCCCAAAGCTAAGAGAACTTGGCCAACTATATAAACCC
CTCGTCCCCCCATCAAACAAATTCAACAAACTCTCACTTCTAACCAAATTTAAATTCAAATTCACCTATTACCCAACAAGAACCATTCATTATTCCATCCATTTTCTTTT
CTTCATCAAGAAGGAAATGAGTTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGATGTGGTTACCCCAAGT
ATGGAGGCCCAGACCCATCAACTTACAGTTACAACAAGACGGAGGCGTTGGCTGGAGACTGGTACTGCACCACCGTCAGCTGTGGAGCTCACAATTACGCCAGCCGCCCC
AACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCCGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAA
ATCTGGAGACTGGATTTGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGAATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGGTCACTTGGGTGTGT
GATACAATTTTGGGTGCTCTATCTTTCAGGTGGTGCAGTGTAAAGCGGGAAGGAATTTTGGAAGGCTCTCCGTATGCGATATATCGTCTTCCTTGGCTTCTGATCCCTAT
CCAAATGCTGCCTTTTTCTTTTTTTTCCTTTTAAATGACTAACAACAATAATGTTAAGCCCTTAGAATGATCCTTAATATAGATATCATGGGTGAAGGCCCATTTTTCC
Protein sequenceShow/hide protein sequence
MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWI
CPRMGCGVHNYASRMECFKCKTPRDFGHLGV