; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025663 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025663
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor protein
Genome locationchr09:19694852..19696472
RNA-Seq ExpressionPI0025663
SyntenyPI0025663
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151201.2 transcription factor PRE6 [Cucumis sativus]8.8e-38100Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

XP_022134204.1 transcription factor PRE6 [Momordica charantia]1.4e-3595.6Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

XP_022939473.1 transcription factor PRE6-like [Cucurbita moschata]4.1e-3593.41Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MS+RRSR S ASRISDDQII+L+SKLRQLVPEIRHRRPDKVSASKVL ETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

XP_022993701.1 transcription factor PRE6-like [Cucurbita maxima]7.0e-3593.41Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MS+RRSR S  SRISDDQIIEL+SKLRQLVPEIRHRRPDKVSASKVL ETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

XP_038890645.1 LOW QUALITY PROTEIN: transcription factor PRE6 [Benincasa hispida]4.4e-3797.8Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQSSASRI+DDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXB9 Transcription regulator4.3e-38100Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

A0A1S3CB29 transcription factor PRE64.3e-38100Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

A0A5A7T970 Transcription factor PRE64.3e-38100Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

A0A6J1BY51 transcription factor PRE66.8e-3695.6Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MSSRRSRQS  SRISDDQIIELVSKLRQLVPEIRHRR DKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTID+DSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

A0A6J1FLR3 transcription factor PRE6-like2.0e-3593.41Show/hide
Query:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MS+RRSR S ASRISDDQII+L+SKLRQLVPEIRHRRPDKVSASKVL ETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
Subjt:  MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

SwissProt top hitse value%identityAlignment
B8APB5 Transcription factor ILI65.2e-2569.57Show/hide
Query:  MSSR--RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM
        MSSR  RSRQS +SRI+D+QI +LVSKL+ L+PE R R  D+V +S+VLQETCNYIR+LH+EVDDLSERLS+LL+T D  SA+AAIIRSL+M
Subjt:  MSSR--RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM

Q8GW32 Transcription factor PRE62.0e-2977.17Show/hide
Query:  MSSR---RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI
        MSSR   RSRQS +SRISDDQI +LVSKL+ L+PE+R RR DKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSSR---RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI

Q9FLE9 Transcription factor PRE16.6e-2876.09Show/hide
Query:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM
        MS+RRSRQ SSA RISD+Q+I+LVSKLRQ++PEI + RR DK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM

Q9LJX1 Transcription factor PRE51.3e-2877.17Show/hide
Query:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM
        MS+RRSRQ S+ASRISDDQ+I+LVSKLRQ +PEI   RR DKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM

Q9LXG5 Transcription factor PRE21.8e-2573.33Show/hide
Query:  SSRRSRQ-SSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI
        SSRRSRQ SS+SRISDDQI +L+SKLRQ +PEIR +RR + VSASKVLQETCNYIRNL++E DDLS+RL+QLL +ID +S +AA+IRSLI
Subjt:  SSRRSRQ-SSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-3077.17Show/hide
Query:  MSSR---RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI
        MSSR   RSRQS +SRISDDQI +LVSKL+ L+PE+R RR DKVSASKVLQETCNYIRNLHREVDDLS+RLS+LL++ D +SAEAAIIRSL+
Subjt:  MSSR---RSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 11.2e-2467.37Show/hide
Query:  MSSRRSR---QSSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ
        MS RRSR    S  SRIS+DQI +L+ KL+QL+PE+R  RR DKVSA++VLQ+TCNYIRNLHREVDDLSERLS+LL+  +SD+A+AA+IRSL+ Q
Subjt:  MSSRRSR---QSSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein9.4e-3077.17Show/hide
Query:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM
        MS+RRSRQ S+ASRISDDQ+I+LVSKLRQ +PEI   RR DKVSASKVLQETCNYIR LHREVD+LS+RLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM

AT5G15160.1 BANQUO 21.3e-2673.33Show/hide
Query:  SSRRSRQ-SSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI
        SSRRSRQ SS+SRISDDQI +L+SKLRQ +PEIR +RR + VSASKVLQETCNYIRNL++E DDLS+RL+QLL +ID +S +AA+IRSLI
Subjt:  SSRRSRQ-SSASRISDDQIIELVSKLRQLVPEIR-HRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLI

AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein4.7e-2976.09Show/hide
Query:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM
        MS+RRSRQ SSA RISD+Q+I+LVSKLRQ++PEI + RR DK SASKVLQETCNYIRNL+REVD+LSERLSQLL ++D DS EAA+IRSL+M
Subjt:  MSSRRSRQ-SSASRISDDQIIELVSKLRQLVPEI-RHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCAGAAGATCAAGGCAGTCAAGTGCTTCTAGAATCAGTGATGACCAAATCATTGAACTTGTTTCCAAACTTCGCCAACTCGTCCCCGAGATTCGCCATCGCCG
CCCCGACAAGGTATCAGCTTCAAAAGTCCTTCAAGAGACTTGCAATTACATTAGAAATTTGCATAGGGAAGTTGATGACTTAAGTGAAAGACTCTCTCAACTTTTATCAA
CTATAGATTCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAG
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTTTAATTTCTCTCTCTCCTAAGTTTTTGTTTTCCTCTGGTGGTCCTTCCCTCTTTATAACTCTCTTATCACTTCCCCCCCTTCTTCCTTCCTTCAAACC
TTCCTCTCTTCTTCTTCTTCTTCTTCTTCTTTCTCCACTTTCCATAAGCACTTTCCCCTCTTCACCCCTTCTTTCCAAAACCAACTTAATTCAACATCAATTTTACAACA
TGTCTAGCAGAAGATCAAGGCAGTCAAGTGCTTCTAGAATCAGTGATGACCAAATCATTGAACTTGTTTCCAAACTTCGCCAACTCGTCCCCGAGATTCGCCATCGCCGC
CCCGACAAGGTATCAGCTTCAAAAGTCCTTCAAGAGACTTGCAATTACATTAGAAATTTGCATAGGGAAGTTGATGACTTAAGTGAAAGACTCTCTCAACTTTTATCAAC
TATAGATTCTGATAGTGCAGAGGCAGCCATAATTAGGAGCTTAATTATGCAATAGGATCAAGAACAAGAACGACAAGGCTGTTGGGTTTGGTAATCATATATATATATTT
TAATATAAGATATTTATATATAAGATATGATGTTACTATGTTATTTATAAGGGGTTTTTTTTTTATATTTCCTTTTCTAGGTTTTTGGTCGCTTAGATAAAAAAAAAGGG
TGTATTTTTCCATGAAAAAGAGAAACGTCCCTTTATTGTTATTATATATAGGGGATGTAACTAAAATGTATAATAGAAGGACTTACATTAGTAAAGCCTTCTCTCTCTAT
ATTTATTTATATATATAAAGTTATATAAATACACCCAAAAAAAATGTACCATCTTCTCACTTTTATTAATTGAGAGAAATGAATATCTAATTAGTCTTTTT
Protein sequenceShow/hide protein sequence
MSSRRSRQSSASRISDDQIIELVSKLRQLVPEIRHRRPDKVSASKVLQETCNYIRNLHREVDDLSERLSQLLSTIDSDSAEAAIIRSLIMQ