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PI0025690 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025690
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 27
Genome locationchr04:5593611..5593967
RNA-Seq ExpressionPI0025690
SyntenyPI0025690
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043815.1 mediator of RNA polymerase II transcription subunit 27 [Cucumis melo var. makuwa]2.1e-1767.11Show/hide
Query:  PRNQRMVQADMLSCAAFGYCNLHAQNDIHIQIIIGANRDFENGHPLLMRSFLLAQVACHHQGKQKIQEKDVSLSLV
        PR +    A MLSCAAFG CN         ++ IGA+RDFEN H LLMR FLLAQVACHHQG+QKIQEKDVSLSLV
Subjt:  PRNQRMVQADMLSCAAFGYCNLHAQNDIHIQIIIGANRDFENGHPLLMRSFLLAQVACHHQGKQKIQEKDVSLSLV
TrEMBL top hitse value%identityAlignment
A0A5D3DNW2 Mediator of RNA polymerase II transcription subunit 271.0e-1767.11Show/hide
Query:  PRNQRMVQADMLSCAAFGYCNLHAQNDIHIQIIIGANRDFENGHPLLMRSFLLAQVACHHQGKQKIQEKDVSLSLV
        PR +    A MLSCAAFG CN         ++ IGA+RDFEN H LLMR FLLAQVACHHQG+QKIQEKDVSLSLV
Subjt:  PRNQRMVQADMLSCAAFGYCNLHAQNDIHIQIIIGANRDFENGHPLLMRSFLLAQVACHHQGKQKIQEKDVSLSLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTGATTCAAAGTATCCTCGAAATCAGAGGATGGTCCAGGCTGATATGCTATCTTGTGCTGCTTTTGGTTATTGCAATTTACATGCACAGAATGATATTCACAT
TCAGATTATCATAGGAGCTAATCGTGATTTCGAAAATGGCCATCCGTTACTGATGCGGTCATTTTTGTTGGCTCAAGTAGCTTGCCATCATCAAGGCAAGCAAAAGATTC
AAGAAAAGGATGTTAGCCTTTCATTAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCTGATTCAAAGTATCCTCGAAATCAGAGGATGGTCCAGGCTGATATGCTATCTTGTGCTGCTTTTGGTTATTGCAATTTACATGCACAGAATGATATTCACAT
TCAGATTATCATAGGAGCTAATCGTGATTTCGAAAATGGCCATCCGTTACTGATGCGGTCATTTTTGTTGGCTCAAGTAGCTTGCCATCATCAAGGCAAGCAAAAGATTC
AAGAAAAGGATGTTAGCCTTTCATTAGTATGA
Protein sequenceShow/hide protein sequence
MDSDSKYPRNQRMVQADMLSCAAFGYCNLHAQNDIHIQIIIGANRDFENGHPLLMRSFLLAQVACHHQGKQKIQEKDVSLSLV