; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025716 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025716
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein SKIP1
Genome locationchr05:4443979..4446254
RNA-Seq ExpressionPI0025716
SyntenyPI0025716
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056113.1 F-box protein SKIP1 [Cucumis melo var. makuwa]1.4e-17297.69Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN+FNNLDPSQ+KGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-15388.12Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPRF+S PTESPAWW P+FE KIDSMLRSAV+WSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRNFFN LDPSQ KGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEA AIAKFM NLEHL+L FSKLSAKALTLIC+GCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_004144728.1 F-box protein SKIP1 [Cucumis sativus]3.1e-16494.39Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRNFFNNLDPSQ+KGIVPDNYLDA PQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_008452697.1 PREDICTED: F-box protein SKIP1 [Cucumis melo]3.7e-17398.02Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN+FNNLDPSQ+KGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]4.1e-16493.4Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKT+KRNFFNNLDPSQ+KGIVPDNYL++CPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+LICEGCP LK+LDLFGCVNLTSRDIANATSS+ENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A0A0LM72 F-box domain-containing protein1.5e-16494.39Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE RFESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLD VAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRNFFNNLDPSQ+KGIVPDNYLDA PQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLE+LELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A1S3BUE6 F-box protein SKIP11.8e-17398.02Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN+FNNLDPSQ+KGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP16.8e-17397.69Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWF AARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN+FNNLDPSQ+KGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP11.8e-17398.02Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSCANVTD SMAKIA GCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN+FNNLDPSQ+KGIVPDNYLDACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
        DVDSEAAAIAKFMHNLEHLELGFSKLSAKALT ICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1KKL1 F-box protein SKIP1-like2.1e-15389.15Show/hide
Query:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL
        +SWAELT ECLTNI SRLTIEQRWRGPMLVCK W RAA D SLFSHFDL+PRF+S PTESPAWW P+FETKIDSMLRSAV+WSLGSLS+IRIRHCSDSSL
Subjt:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSL

Query:  DFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAA
          VAQGCPNLEVLSIKSCANVTDRSMAKIA GCQKL+EVDISYCHEISN+SL+LIG+HCPNIKTLKRNFFN LDPSQ KGIVPD+YL+ACPQDVDSEA A
Subjt:  DFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAA

Query:  IAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
        IAKFM NLEHLEL FSK+SAKALTLIC+GCPNLKYLDLFGCVNLTSRDI NATSSLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Subjt:  IAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP12.7e-9458.67Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P ES   W PEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEA
        +L + A  CPNL+VL+I+S  NVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S++ G VP  YLDACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEA

Query:  AAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L  ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  AAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 196.3e-7553.26Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIA

Query:  KFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER
        K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R
Subjt:  KFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER

Q9M0U6 Putative F-box/LRR-repeat protein 221.1e-1528.63Show/hide
Query:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI---RHCSD
        S+WAEL  + L++IL RL+  +       VC+ W R ++DP ++   D+          +           +++  R  V  S G L    I   R  + 
Subjt:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI---RHCSD

Query:  SSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKR-NFFNNLDPSQNKGIVPDNYLDACPQDVDS
        S L+++A+   NL  L +K    +T   + +       L E+++ YC  I       IG+ CPN+KTLK   F+++L+ S                  D+
Subjt:  SSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKR-NFFNNLDPSQNKGIVPDNYLDACPQDVDS

Query:  EAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        +A AIA  M  L HL+L  + L+   L  I +GCP+L+ LDL  C N+
Subjt:  EAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

Q9M0U8 Putative F-box/LRR-repeat protein 211.7e-1929.48Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCS
        E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +                   +     SM R  V  S G L  I +     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCS

Query:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDAC-PQDV
        DS L ++     NL  L +  C   VT   +    +    L  ++++  H    + L  IG  CP +KTLK N    L P+ +K     N LD   P + 
Subjt:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDAC-PQDV

Query:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT
        D +A AIA+ M  L HL+L  ++L+   L  I +GCP+L++LD+  C  ++
Subjt:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT

Q9S9V8 Putative F-box/LRR-repeat protein 91.1e-2332.16Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + E+       +++      I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        +  ++S L+++A    NL  L +  CA V  R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ M  L HL+L  + LS   L  I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05470.1 RNI-like superfamily protein1.2e-2029.48Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCS
        E  +W +L  E  T+IL RL++         VCK W R  +DPS++   +                   +     SM R  V  S G L  I +     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCS

Query:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDAC-PQDV
        DS L ++     NL  L +  C   VT   +    +    L  ++++  H    + L  IG  CP +KTLK N    L P+ +K     N LD   P + 
Subjt:  DSSLDFVAQGCPNLEVLSIKSC-ANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDAC-PQDV

Query:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT
        D +A AIA+ M  L HL+L  ++L+   L  I +GCP+L++LD+  C  ++
Subjt:  DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT

AT4G05497.1 RNI-like superfamily protein8.0e-2532.16Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R  +DPS++   D+  + E+       +++      I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ
        +  ++S L+++A    NL  L +  CA V  R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQ

Query:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ M  L HL+L  + LS   L  I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein4.5e-7653.26Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P ES  WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIA
         A+ CPNLEVL IK+C NVTD SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + P +YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIA

Query:  KFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER
        K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L+NL EI KP+F  P +V    R
Subjt:  KFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRSVFHTER

AT5G52480.1 RNI-like superfamily protein6.8e-1630.19Show/hide
Query:  DSMLRSAVRWSLGSLSVIRIRHC-SDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN--F
        +++ R+AV  S G L  I I    SDS L ++A+   NL  L +  C+ +TD    +       L E+++S    +S  S+ L G  CPN+KTL  N  F
Subjt:  DSMLRSAVRWSLGSLSVIRIRHC-SDSSLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRN--F

Query:  FNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIP
        + + D                  D D +A AIA+ M  L HL+L  +KL+   L  I +GCP+L++LDL  C+NL           +++L     +    
Subjt:  FNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIP

Query:  RSVFHTERYDHW
                Y HW
Subjt:  RSVFHTERYDHW

AT5G57900.1 SKP1 interacting partner 11.9e-9558.67Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W    RDP L+S FDLEP F+S P ES   W PEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEA
        +L + A  CPNL+VL+I+S  NVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S++ G VP  YLDACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEA

Query:  AAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L  ICEGCP L+YLDLFGCV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Subjt:  AAIAKFMHNLEHLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCT
CGTTTGCAAGCACTGGTTCCGCGCCGCCAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGC
CGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTC
GTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACCGATAGATCAATGGCTAAGATTGCTTCTGGCTGCCAAAAGCTCCGGGAAGT
AGATATCAGCTACTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCAT
CCCAAAACAAGGGAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAA
CTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGAGATAT
AGCGAATGCCACATCAAGTTTGGAGAATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGACCATTGGAGGTTGTATGATG
AGAGATTCCAAACTGATATTTTCCGAATTTGA
mRNA sequenceShow/hide mRNA sequence
TTATAATTGAGTACATAGTTGAGAATGAGTTTTGCAATTTTTCGATTAAGAAAAAGGTCGGTAGAGGCAACTATCTCCATTCTCACGCCAAATGATAGGATCACGGTTTT
TCTTGTATGGCGCACATCTCAACAAAACTCGAAAGGAAAAGAAAAATAAAAACCTCTATTTCCTTTCTTCATTCCTAAATTTTTAAAGTCACCCGAAAATGGCCGAGCCG
TCGTCGGAGTCATCATCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATCGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAGCA
CTGGTTCCGCGCCGCCAGGGACCCTTCTCTCTTTTCTCACTTCGATCTCGAACCCAGGTTCGAGTCTGCCCCCACCGAGTCTCCGGCCTGGTGGTTGCCGGAGTTCGAGA
CCAAGATCGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTCGTCGCTCAAGGG
TGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACCGATAGATCAATGGCTAAGATTGCTTCTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTA
CTGTCATGAAATCTCGAACATATCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCATCCCAAAACAAGG
GAATTGTCCCTGACAATTATCTAGATGCCTGCCCACAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTCATGCACAACTTGGAGCACCTTGAACTCGGTTTCTCT
AAACTATCTGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGAGATATAGCGAATGCCAC
ATCAAGTTTGGAGAATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGACCATTGGAGGTTGTATGATGAGAGATTCCAAA
CTGATATTTTCCGAATTTGATTCTGCAAGTTCTCTCTTAATACTATATGTATAGCTGCACTTTGAAACCAAGATTAATATTTTCCTAAGTTGCACAGTTTTTAATTTACC
TGTTCTGTTTTATGACATACACAAGTCAGTATTATCTTTTTAACTTGTATGGTGGACTGATGTGGCACAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTT
AACCTTGTACATCTCTAATCTCTTGATATGTTAACCTTGTACATGACCTTACAACATTTGGATGTCAAGAAAACTCGTAGCAAATTGATTTCTAGATAGGTGGACACCAT
GACTTGGTTTGTTAATA
Protein sequenceShow/hide protein sequence
MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDF
VAQGCPNLEVLSIKSCANVTDRSMAKIASGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNFFNNLDPSQNKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLE
LGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI