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PI0025724 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025724
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr01:21412596..21416900
RNA-Seq ExpressionPI0025724
SyntenyPI0025724
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]7.7e-3075.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG+KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-2975.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-2975.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.0e-2975.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-3076.27Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        MAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein4.9e-3075.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
A0A5A7SMN4 Gag/pol protein3.7e-3075.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG+KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
A0A5A7TU93 Gag/pol protein4.9e-3075.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
A0A5A7V4M1 Gag/pol protein4.9e-3075.42Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        +AE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
A0A5A7VH46 Gag/pol protein1.7e-3076.27Show/hide
Query:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG
        MAE NGAVIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KGQK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKG
Subjt:  MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKG

Query:  GKG-KGPAVAAKGKGKAK
        G+G K    AAK   KAK
Subjt:  GKG-KGPAVAAKGKGKAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACGAACGGGGCGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAA
GATAGAGTATACCATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGT
TTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGGTCCTGCTGTTGCTGCTAAG
GGCAAGGGGAAGGCTAAGGTGAGAGTGGCCAGATTGCCGACTCAATATGCTTATCATTTTGGGGACAAGATCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAACGAACGGGGCGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGGTTATGAACAA
GATAGAGTATACCATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCATTCCAAGAGGT
TTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAGGGGAAAGGTCCTGCTGTTGCTGCTAAG
GGCAAGGGGAAGGCTAAGGTGAGAGTGGCCAGATTGCCGACTCAATATGCTTATCATTTTGGGGACAAGATCGAGTGA
Protein sequenceShow/hide protein sequence
MAETNGAVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKGPAVAAK
GKGKAKVRVARLPTQYAYHFGDKIE