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PI0025731 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025731
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-dependent RNA polymerase
Genome locationtig00003624:420958..421771
RNA-Seq ExpressionPI0025731
SyntenyPI0025731
Gene Ontology termsGO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR008686 - RNA-dependent RNA polymerase, mitoviral


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAB41758.1 TPA_inf: RNA-dependent RNA polymerase [Beta vulgaris mitovirus 1]3.7e-1751.58Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
        +PG R   YAVLGDDV+I D KV  +Y   ++ LGV +S  K  S+ S++GCIEFAKKF+V+G+ +DLSPIS+  L++Y+HP G+ AI  K + R
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
DAC76746.1 TPA_inf: RNA-dependent RNA polymerase [Beta vulgaris mitovirus 1]3.7e-1751.58Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
        +PG R   YAVLGDDV+I D KV  +Y   ++ LGV +S  K  S+ S++GCIEFAKKF+V+G+ +DLSPIS+  L++Y+HP G+ AI  K + R
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
KAA0041212.1 RNA-dependent RNA polymerase, mitoviral [Cucumis melo var. makuwa]3.3e-1861.62Show/hide
Query:  KGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKE
        K KWSH GI  +KYA  GDDVLIADAKVGSVYKSLLQRLGVAVSL K  S+ SNSGCIEFAKK                         GLMAILHKSK+
Subjt:  KGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKE
KAG6467701.1 hypothetical protein ZIOFF_074439 [Zingiber officinale]1.6e-2060.23Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAI
        +PG +  +YAVLGDDVLIAD +V  VY SLL RLGV++S   S+S+ S++GC+EFAK+F V+G  +DLSP+S+ CL +YYHPNGL AI
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAI
OMP11007.1 RNA-dependent RNA polymerase, mitoviral [Corchorus olitorius]1.3e-1772.73Show/hide
Query:  KGKWSHP--------GIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGV
        K KWS          G+R KKYAVLGDDV+IA AKV SVYKS+LQRLGVAVSLPK  S+ SNSGCIEFAKKFMVNGV
Subjt:  KGKWSHP--------GIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGV
TrEMBL top hitse value%identityAlignment
A0A1R3KVD5 RNA-dependent RNA polymerase, mitoviral6.2e-1872.73Show/hide
Query:  KGKWSHP--------GIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGV
        K KWS          G+R KKYAVLGDDV+IA AKV SVYKS+LQRLGVAVSLPK  S+ SNSGCIEFAKKFMVNGV
Subjt:  KGKWSHP--------GIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGV
A0A2Z6JSN1 RNA-dependent RNA polymerase1.8e-1751.58Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
        +PG R   YAVLGDDV+I D KV  +Y   ++ LGV +S  K  S+ S++GCIEFAKKF+V+G+ +DLSPIS+  L++Y+HP G+ AI  K + R
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
A0A482F0S6 RNA-dependent RNA polymerase1.8e-1751.58Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
        +PG R   YAVLGDDV+I D KV  +Y   ++ LGV +S  K  S+ S++GCIEFAKKF+V+G+ +DLSPIS+  L++Y+HP G+ AI  K + R
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
A0A482F2F1 RNA-dependent RNA polymerase1.8e-1751.58Show/hide
Query:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
        +PG R   YAVLGDDV+I D KV  +Y   ++ LGV +S  K  S+ S++GCIEFAKKF+V+G+ +DLSPIS+  L++Y+HP G+ AI  K + R
Subjt:  HPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKER
A0A5D3CX16 RNA-dependent RNA polymerase, mitoviral1.6e-1861.62Show/hide
Query:  KGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKE
        K KWSH GI  +KYA  GDDVLIADAKVGSVYKSLLQRLGVAVSL K  S+ SNSGCIEFAKK                         GLMAILHKSK+
Subjt:  KGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSKE
SwissProt top hitse value%identityAlignment
P92543 Uncharacterized mitochondrial protein AtMg011101.1e-1143.53Show/hide
Query:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
        YA+LGDD++IAD  V   Y+SLL  L V +S   ++S+ S +GC+EFAK+F V  +S+DLSP+S   +   Y   G   + +K K
Subjt:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
P92567 Uncharacterized mitochondrial protein AtMg014107.3e-0846.97Show/hide
Query:  SLPVWLTPHSREIYSCNPKGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKS
        S P +   H   ++ C    K  HPG+R   YAVLGDDV+IAD +V  VY+S L  LGV +S  KS
Subjt:  SLPVWLTPHSREIYSCNPKGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKS
Arabidopsis top hitse value%identityAlignment
AT2G07749.1 Mitovirus RNA-dependent RNA polymerase7.7e-1343.53Show/hide
Query:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
        YA+LGDD++IAD  V   Y+SLL  L V +S   ++S+ S +GC+EFAK+F V  +S+DLSP+S   +   Y   G   + +K K
Subjt:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
ATMG01110.1 Mitovirus RNA-dependent RNA polymerase7.7e-1343.53Show/hide
Query:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
        YA+LGDD++IAD  V   Y+SLL  L V +S   ++S+ S +GC+EFAK+F V  +S+DLSP+S   +   Y   G   + +K K
Subjt:  YAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGVSEDLSPISIPCLSHYYHPNGLMAILHKSK
ATMG01410.1 open reading frame 2045.2e-0946.97Show/hide
Query:  SLPVWLTPHSREIYSCNPKGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKS
        S P +   H   ++ C    K  HPG+R   YAVLGDDV+IAD +V  VY+S L  LGV +S  KS
Subjt:  SLPVWLTPHSREIYSCNPKGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGATCAGAGCCCGGACCACACCATCTGATTTTCAGTCTTCCAGTGCCTCTGAAACCGGTCCTTCGCTTCCAGTATGGTTAACTCCGCACTCGCGAGAAATCTA
TTCCTGCAACCCTAAAGGCAAATGGTCCCACCCAGGTATCCGCTTGAAAAAGTATGCAGTGCTCGGTGATGACGTTCTCATTGCCGATGCAAAAGTAGGATCAGTCTATA
AATCCCTTCTTCAACGACTTGGGGTTGCGGTATCGCTACCAAAATCCCGCTCCGTGGGCTCGAATAGCGGATGCATAGAGTTTGCCAAGAAGTTCATGGTTAATGGAGTG
AGTGAGGATCTCAGTCCAATCTCAATCCCTTGCCTAAGTCACTACTATCACCCCAATGGTCTTATGGCCATTCTCCACAAATCAAAGGAAAGGATGACTTTAGTACCCTT
TGCCGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAGATCAGAGCCCGGACCACACCATCTGATTTTCAGTCTTCCAGTGCCTCTGAAACCGGTCCTTCGCTTCCAGTATGGTTAACTCCGCACTCGCGAGAAATCTA
TTCCTGCAACCCTAAAGGCAAATGGTCCCACCCAGGTATCCGCTTGAAAAAGTATGCAGTGCTCGGTGATGACGTTCTCATTGCCGATGCAAAAGTAGGATCAGTCTATA
AATCCCTTCTTCAACGACTTGGGGTTGCGGTATCGCTACCAAAATCCCGCTCCGTGGGCTCGAATAGCGGATGCATAGAGTTTGCCAAGAAGTTCATGGTTAATGGAGTG
AGTGAGGATCTCAGTCCAATCTCAATCCCTTGCCTAAGTCACTACTATCACCCCAATGGTCTTATGGCCATTCTCCACAAATCAAAGGAAAGGATGACTTTAGTACCCTT
TGCCGGATAG
Protein sequenceShow/hide protein sequence
MPEIRARTTPSDFQSSSASETGPSLPVWLTPHSREIYSCNPKGKWSHPGIRLKKYAVLGDDVLIADAKVGSVYKSLLQRLGVAVSLPKSRSVGSNSGCIEFAKKFMVNGV
SEDLSPISIPCLSHYYHPNGLMAILHKSKERMTLVPFAG