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PI0025739 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025739
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein
Genome locationchr11:21782770..21783424
RNA-Seq ExpressionPI0025739
SyntenyPI0025739
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737539.1 uncharacterized protein LOC116402431 [Cucumis sativus]9.2e-4786.41Show/hide
Query:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE
        PIQPPYPKWYD NA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKKA EKPDVNNNPL NHENSKVNA+DCF  +CK EVHEIRMPME LFE +FE
Subjt:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE

Query:  AGY
        AGY
Subjt:  AGY

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]9.2e-4786.41Show/hide
Query:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE
        PIQPPYPKWYD NA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKKA EKPDVNNNPL NHENSKVNA+DCF  +CK EVHEIRMPME LFE +FE
Subjt:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE

Query:  AGY
        AGY
Subjt:  AGY

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]9.2e-4786.41Show/hide
Query:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE
        PIQPPYPKWYD NA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKKA EKPDVNNNPL NHENSKVNA+DCF  +CK EVHEIRMPME LFE +FE
Subjt:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE

Query:  AGY
        AGY
Subjt:  AGY

XP_031741309.1 LOW QUALITY PROTEIN: uncharacterized protein LOC105435093 [Cucumis sativus]9.2e-4786.41Show/hide
Query:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE
        PIQPPYPKWYD NA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKKA EKPDVNNNPL NHENSKVNA+DCF  +CK EVHEIRMPME LFE +FE
Subjt:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE

Query:  AGY
        AGY
Subjt:  AGY

XP_031741698.1 uncharacterized protein LOC116403895 [Cucumis sativus]9.2e-4786.41Show/hide
Query:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE
        PIQPPYPKWYD NA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKKA EKPDVNNNPL NHENSKVNA+DCF  +CK EVHEIRMPME LFE +FE
Subjt:  PIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFE

Query:  AGY
        AGY
Subjt:  AGY

TrEMBL top hitse value%identityAlignment
A0A5A7T5W2 Retrotrans_gag domain-containing protein1.3e-4380.95Show/hide
Query:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI
        MIPIQPPYPKWYDSNA+CDYHAGG GHST+NCLALKR VQSLINAGWLSFKK+ +KP+VN NPL +HEN KVN VD   E+CK EVHEI MPMEALFES+
Subjt:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI

Query:  FEAGY
        FEAGY
Subjt:  FEAGY

A0A5A7ULC1 Uncharacterized protein5.1e-4380Show/hide
Query:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI
        MIPIQPPYPKWYDSNA+CDYHAGG GHST+NCLALKR VQSLIN GWLSFKK  EKP+VN NPL +HEN KVNAVD   E+CK EVHEI MPMEALFE +
Subjt:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI

Query:  FEAGY
        F+AGY
Subjt:  FEAGY

A0A5A7V3W7 Retrotrans_gag domain-containing protein3.5e-4481.9Show/hide
Query:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI
        MIPIQPPYPKWYDSNA+CDYHAGG GHST+NC ALKR VQSLINAGWLSFKK+ EKP+VN NPL NHEN KVNAVD   E+CK EVHEI MPMEALFE +
Subjt:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI

Query:  FEAGY
        FEAGY
Subjt:  FEAGY

A0A5A7VIM6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein2.3e-4380Show/hide
Query:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI
        MIPI+PPYPKW+DSNA+CDYHAGG GHST+NCLALKRKVQSLINAGWLSFKK+ EKP+VN NPL +HEN KVN VD   E+CK EVHEI MPMEALFE +
Subjt:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI

Query:  FEAGY
        FEAGY
Subjt:  FEAGY

A0A5A7VK41 Reverse transcriptase domain-containing protein1.3e-4380.95Show/hide
Query:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI
        MIPIQPPYPKWYDSNA+CDYHAGG GHST+NCLALKRKVQSLIN GWLSFKK+ EKP+VN NPL NHEN KV  VD   E+CK EVHEI MPMEALFE +
Subjt:  MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESI

Query:  FEAGY
        FEAGY
Subjt:  FEAGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTATACAACCTCCTTATCCAAAATGGTATGATTCAAATGCTCAATGTGATTATCATGCTGGAGGGCAAGGACACTCAACTAAAAATTGTTTGGCTTTGAAAAG
GAAGGTGCAATCTTTGATTAATGCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAACAATCCACTCCTTAATCATGAAAATTCAAAGGTGAATG
CTGTGGATTGCTTTGACGAAGAGTGTAAAAAAGAGGTTCATGAGATAAGGATGCCCATGGAAGCACTTTTTGAAAGTATTTTTGAAGCAGGATATAAACTCGGCGAAGAA
GAATATACTAGGCGTTCAGCGTTGCAACCAGACGTCCAAGATATCATCTGGCGAACAAGCCAGCACATTGCTATGCGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTATACAACCTCCTTATCCAAAATGGTATGATTCAAATGCTCAATGTGATTATCATGCTGGAGGGCAAGGACACTCAACTAAAAATTGTTTGGCTTTGAAAAG
GAAGGTGCAATCTTTGATTAATGCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAACAATCCACTCCTTAATCATGAAAATTCAAAGGTGAATG
CTGTGGATTGCTTTGACGAAGAGTGTAAAAAAGAGGTTCATGAGATAAGGATGCCCATGGAAGCACTTTTTGAAAGTATTTTTGAAGCAGGATATAAACTCGGCGAAGAA
GAATATACTAGGCGTTCAGCGTTGCAACCAGACGTCCAAGATATCATCTGGCGAACAAGCCAGCACATTGCTATGCGAGGCTGA
Protein sequenceShow/hide protein sequence
MIPIQPPYPKWYDSNAQCDYHAGGQGHSTKNCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLLNHENSKVNAVDCFDEECKKEVHEIRMPMEALFESIFEAGYKLGEE
EYTRRSALQPDVQDIIWRTSQHIAMRG