; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025754 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025754
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-proteinase polyprotein
Genome locationchr03:11038785..11039670
RNA-Seq ExpressionPI0025754
SyntenyPI0025754
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035157.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.1e-2938.67Show/hide
Query:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-NLFGKTRENDKNTNNN
        A+DI TLK+D+ F  L  FE+T   +  KKGKG+AF+    +E      +V +D +IA       N++ N ++ N   +N  T N + +  +N     NN
Subjt:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-NLFGKTRENDKNTNNN

Query:  YPNNDRS-------------FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE
          +N RS             F+CREC G GHYQ+ECP F R+QKK+    L D+ESV S D D NI A    +T+D++        D LS + L   W+E
Subjt:  YPNNDRS-------------FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE

Query:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        D      QK RIQ L+E+N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

KAA0053200.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.7e-2839.36Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN
        MKV  IEEA+DI TLK+DELF  L  FE+ T D++  KK KG+AF+  +VS+      +  + +    NS    D             + K +E D+   
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN

Query:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH
               + F+CREC G GHYQ ECP F R+QKK+   TL D+E V S D   NI A    +T++ TD          +D++L EK    W+ED      
Subjt:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH

Query:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        QK RIQ L+E+N RL+S IS LK   R  +   D I KS +MLN GT++
Subjt:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

KAA0066403.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]7.5e-3139.92Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFSTNLFGKTREN
        MKVT IEE +DI TLK+DELF  L  FE+T   +  KKGKG+AF+ V+ +E      +  +D +IA       N + N  + N   VN  T+   + R +
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFSTNLFGKTREN

Query:  DKNTNNNYPNNDRS----FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----W
        +  T  N  N+D+      K +ECEG  HYQ ECP F R+QKK+   +L D+ESV S D D NI A    +T++ TD          +D++  EK    W
Subjt:  DKNTNNNYPNNDRS----FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----W

Query:  QEDQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        +ED      QK RIQ L+++N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  QEDQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

TYK00141.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.7e-2839.36Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN
        MKV  IEEA+DI TLK+DELF  L  FE+ T D++  KK KG+AF+  +VS+      +  + +    NS    D             + K +E D+   
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN

Query:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH
               + F+CREC G GHYQ ECP F R+QKK+   TL D+E V S D   NI A    +T++ TD          +D++L EK    W+ED      
Subjt:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH

Query:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        QK RIQ L+E+N RL+S IS LK   R  +   D I KS +MLN GT++
Subjt:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

TYK29237.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.3e-2939.45Show/hide
Query:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-------NLFGKTREND
        A+DI TLK+D+ F  L  FE+T   +  KKGK +AF+ +  +E      +V +D +IA       N++ N ++ N   +N  T       N  G TR N+
Subjt:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-------NLFGKTREND

Query:  KNTNNNYPN------NDRS-FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE
        +N+N    +       DR  F+CREC G GHYQ+ECP F R+QKK+   TL D+ESV S D D NI A    +T+D++        D LS + L   W+E
Subjt:  KNTNNNYPN------NDRS-FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE

Query:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        D      QK RIQ L+E+N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

TrEMBL top hitse value%identityAlignment
A0A5A7T0Q0 Gag-pol polyprotein2.0e-2938.67Show/hide
Query:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-NLFGKTRENDKNTNNN
        A+DI TLK+D+ F  L  FE+T   +  KKGKG+AF+    +E      +V +D +IA       N++ N ++ N   +N  T N + +  +N     NN
Subjt:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-NLFGKTRENDKNTNNN

Query:  YPNNDRS-------------FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE
          +N RS             F+CREC G GHYQ+ECP F R+QKK+    L D+ESV S D D NI A    +T+D++        D LS + L   W+E
Subjt:  YPNNDRS-------------FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE

Query:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        D      QK RIQ L+E+N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

A0A5A7UDB5 Gag-pol polyprotein1.3e-2839.36Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN
        MKV  IEEA+DI TLK+DELF  L  FE+ T D++  KK KG+AF+  +VS+      +  + +    NS    D             + K +E D+   
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN

Query:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH
               + F+CREC G GHYQ ECP F R+QKK+   TL D+E V S D   NI A    +T++ TD          +D++L EK    W+ED      
Subjt:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH

Query:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        QK RIQ L+E+N RL+S IS LK   R  +   D I KS +MLN GT++
Subjt:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

A0A5A7VE51 Gag-proteinase polyprotein3.6e-3139.92Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFSTNLFGKTREN
        MKVT IEE +DI TLK+DELF  L  FE+T   +  KKGKG+AF+ V+ +E      +  +D +IA       N + N  + N   VN  T+   + R +
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFSTNLFGKTREN

Query:  DKNTNNNYPNNDRS----FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----W
        +  T  N  N+D+      K +ECEG  HYQ ECP F R+QKK+   +L D+ESV S D D NI A    +T++ TD          +D++  EK    W
Subjt:  DKNTNNNYPNNDRS----FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----W

Query:  QEDQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        +ED      QK RIQ L+++N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  QEDQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

A0A5D3BJZ7 Gag-pol polyprotein1.3e-2839.36Show/hide
Query:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN
        MKV  IEEA+DI TLK+DELF  L  FE+ T D++  KK KG+AF+  +VS+      +  + +    NS    D             + K +E D+   
Subjt:  MKVTTIEEANDIATLKMDELFWFLRVFEL-TFDVKCEKKGKGLAFQ--YVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTN

Query:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH
               + F+CREC G GHYQ ECP F R+QKK+   TL D+E V S D   NI A    +T++ TD          +D++L EK    W+ED      
Subjt:  NNYPNNDRSFKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETD--------GLSDDVLYEK----WQEDQVVLEH

Query:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        QK RIQ L+E+N RL+S IS LK   R  +   D I KS +MLN GT++
Subjt:  QKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

A0A5D3DZD2 Gag-pol polyprotein2.6e-2939.45Show/hide
Query:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-------NLFGKTREND
        A+DI TLK+D+ F  L  FE+T   +  KKGK +AF+ +  +E      +V +D +IA       N++ N ++ N   +N  T       N  G TR N+
Subjt:  ANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKV-VDVNIA-------NSIYNKDHGNYNSVNFST-------NLFGKTREND

Query:  KNTNNNYPN------NDRS-FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE
        +N+N    +       DR  F+CREC G GHYQ+ECP F R+QKK+   TL D+ESV S D D NI A    +T+D++        D LS + L   W+E
Subjt:  KNTNNNYPN------NDRS-FKCRECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDET--------DGLSDDVLYEKWQE

Query:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD
        D      QK RIQ L+E+N RL+S IS LK   R  +   D I K V+MLN GT++
Subjt:  DQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDSISKSVRMLNIGTKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTAACGACCATTGAAGAAGCAAATGATATTGCTACTCTAAAGATGGATGAGTTGTTTTGGTTCTTACGCGTGTTTGAGCTAACATTTGATGTTAAGTGTGAGAA
AAAGGGAAAAGGATTGGCTTTTCAATATGTGAGCGACAATGAACCCCATCAGGTTAAGGGTAAGGTTGTTGATGTAAATATAGCTAATTCTATTTACAATAAAGACCATG
GTAACTACAATAGTGTTAACTTTTCTACAAATTTGTTTGGCAAAACAAGAGAAAACGATAAAAATACGAACAATAATTATCCTAACAATGACAGAAGCTTCAAATGTAGA
GAGTGTGAGGGTTTTGGGCACTATCAGATCGAGTGTCCAAATTTTCGGAGAAGGCAAAAGAAGAGTCTTGCAGCAACTCTCTTTGATGATGAATCAGTTGTAAGTAGTGA
TAGCGATGATAATATCCGTGCCTTGCTAGGGTGCCTTACGAATGATGAAACTGATGGCTTGAGTGACGACGTGTTATATGAAAAATGGCAAGAGGATCAAGTTGTTCTAG
AGCACCAAAAGAACAGAATTCAAAAGCTGATCGAAGATAATCGTCGTCTACTTTCTACAATCTCTGAGCTGAAGAAAGATCAAAGGGCTACTCGGATGAATATTGACTCC
ATATCAAAATCTGTGCGCATGCTCAACATTGGCACAAAAGATTCTAAACTTGATTTTGAATGTTGGAAAGACTCGTTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTAACGACCATTGAAGAAGCAAATGATATTGCTACTCTAAAGATGGATGAGTTGTTTTGGTTCTTACGCGTGTTTGAGCTAACATTTGATGTTAAGTGTGAGAA
AAAGGGAAAAGGATTGGCTTTTCAATATGTGAGCGACAATGAACCCCATCAGGTTAAGGGTAAGGTTGTTGATGTAAATATAGCTAATTCTATTTACAATAAAGACCATG
GTAACTACAATAGTGTTAACTTTTCTACAAATTTGTTTGGCAAAACAAGAGAAAACGATAAAAATACGAACAATAATTATCCTAACAATGACAGAAGCTTCAAATGTAGA
GAGTGTGAGGGTTTTGGGCACTATCAGATCGAGTGTCCAAATTTTCGGAGAAGGCAAAAGAAGAGTCTTGCAGCAACTCTCTTTGATGATGAATCAGTTGTAAGTAGTGA
TAGCGATGATAATATCCGTGCCTTGCTAGGGTGCCTTACGAATGATGAAACTGATGGCTTGAGTGACGACGTGTTATATGAAAAATGGCAAGAGGATCAAGTTGTTCTAG
AGCACCAAAAGAACAGAATTCAAAAGCTGATCGAAGATAATCGTCGTCTACTTTCTACAATCTCTGAGCTGAAGAAAGATCAAAGGGCTACTCGGATGAATATTGACTCC
ATATCAAAATCTGTGCGCATGCTCAACATTGGCACAAAAGATTCTAAACTTGATTTTGAATGTTGGAAAGACTCGTTCTACTAA
Protein sequenceShow/hide protein sequence
MKVTTIEEANDIATLKMDELFWFLRVFELTFDVKCEKKGKGLAFQYVSDNEPHQVKGKVVDVNIANSIYNKDHGNYNSVNFSTNLFGKTRENDKNTNNNYPNNDRSFKCR
ECEGFGHYQIECPNFRRRQKKSLAATLFDDESVVSSDSDDNIRALLGCLTNDETDGLSDDVLYEKWQEDQVVLEHQKNRIQKLIEDNRRLLSTISELKKDQRATRMNIDS
ISKSVRMLNIGTKDSKLDFECWKDSFY