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PI0025777 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025777
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:15209630..15210199
RNA-Seq ExpressionPI0025777
SyntenyPI0025777
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049609.1 transposase [Cucumis melo var. makuwa]7.0e-2140.29Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VED  V F  + IN+LYD  N     P   L+    +  A+K ++ I W  A+   T T + QL+P+QLT + N+W FFIKKKI PT HDST+  +Y +
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        ++YCI  +   ++G +M+++ L WM  PK A PFP+ ++
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

KAA0057652.1 hypothetical protein E6C27_scaffold43054G00260 [Cucumis melo var. makuwa]3.1e-2140.15Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMNVETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMMI
        MVE   V F  DAIN+L+  +  +   HA+   P +R    AL+ +AW   +W I  TGKYQL+   L T+  +W  F+K  I PT HDST+S++++M++
Subjt:  MVEDMSVYFNVDAINKLYDSMNVETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMMI

Query:  YCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        YCIM+ L V+I  I+S+ ++ W++ P+   PF  +IE
Subjt:  YCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]8.0e-2545.65Show/hide
Query:  VEDMSVYFNVDAINKLYDSMN-VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTG-KYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMM
        +ED   YFNV+ IN+LY+S N  E     +VT+  K  A++AL+ +AW     ++     +YQLYP+ LTTK N+W FF K KI PTC+DST+S+ Y ++
Subjt:  VEDMSVYFNVDAINKLYDSMN-VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTG-KYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMM

Query:  IYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        +YCIM + A+++  I+  ++L WME PK A+PFPS++E
Subjt:  IYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]7.0e-2140.29Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VED  V F  + IN+LYD  N     P   L+    +  A+K ++ I W  A+   T T + QL+P+QLT + N+W FFIKKKI PT HDST+  +Y +
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        ++YCI  +   ++G +M+++ L WM  PK A PFP+ ++
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]1.2e-2041.35Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VE   V F ++ IN+LY  +N     P  +L+  P K  +R  ++ IAW  A W  T T   QLYP+QLTT+ N+W  FIKKKI+P C+DST+ ++Y++
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALP
        ++YC M +   ++G +M+++ LG M   KGA P
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALP

TrEMBL top hitse value%identityAlignment
A0A5A7U806 Transposase3.4e-2140.29Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VED  V F  + IN+LYD  N     P   L+    +  A+K ++ I W  A+   T T + QL+P+QLT + N+W FFIKKKI PT HDST+  +Y +
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        ++YCI  +   ++G +M+++ L WM  PK A PFP+ ++
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

A0A5A7V6M5 Gag/pol protein3.9e-2545.65Show/hide
Query:  VEDMSVYFNVDAINKLYDSMN-VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTG-KYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMM
        +ED   YFNV+ IN+LY+S N  E     +VT+  K  A++AL+ +AW     ++     +YQLYP+ LTTK N+W FF K KI PTC+DST+S+ Y ++
Subjt:  VEDMSVYFNVDAINKLYDSMN-VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTG-KYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMM

Query:  IYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        +YCIM + A+++  I+  ++L WME PK A+PFPS++E
Subjt:  IYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

A0A5D3CVL7 Uncharacterized protein3.4e-2140.29Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VED  V F  + IN+LYD  N     P   L+    +  A+K ++ I W  A+   T T + QL+P+QLT + N+W FFIKKKI PT HDST+  +Y +
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        ++YCI  +   ++G +M+++ L WM  PK A PFP+ ++
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

A0A5D3D7L3 Uncharacterized protein1.5e-2140.15Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMNVETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMMI
        MVE   V F  DAIN+L+  +  +   HA+   P +R    AL+ +AW   +W I  TGKYQL+   L T+  +W  F+K  I PT HDST+S++++M++
Subjt:  MVEDMSVYFNVDAINKLYDSMNVETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMMI

Query:  YCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE
        YCIM+ L V+I  I+S+ ++ W++ P+   PF  +IE
Subjt:  YCIMKQLAVDIGTIMSDSLLGWMEAPKGALPFPSIIE

A0A5D3DES7 Uncharacterized protein5.8e-2141.35Show/hide
Query:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM
        +VE   V F ++ IN+LY  +N     P  +L+  P K  +R  ++ IAW  A W  T T   QLYP+QLTT+ N+W  FIKKKI+P C+DST+ ++Y++
Subjt:  MVEDMSVYFNVDAINKLYDSMN--VETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVM

Query:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALP
        ++YC M +   ++G +M+++ LG M   KGA P
Subjt:  MIYCIMKQLAVDIGTIMSDSLLGWMEAPKGALP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGGATATGAGCGTCTACTTCAACGTGGATGCCATTAACAAACTGTACGACTCCATGAACGTGGAAACGCCATGGCATGCCTTGGTGACTAGACCTTTAAAGAG
GCAGGCTAGGAAAGCGTTAGAGACGATTGCGTGGTCTTGGGCGGAATGGAAAATCACTCAAACTGGAAAATATCAACTGTACCCATACCAGCTAACCACTAAGACAAACA
TGTGGAACTTCTTCATTAAAAAGAAAATCATGCCAACGTGTCACGACAGCACTATGTCGCTAAAGTACGTGATGATGATCTATTGCATCATGAAGCAGTTGGCAGTTGAT
ATTGGCACAATCATGAGCGATTCTCTTCTTGGATGGATGGAAGCTCCCAAGGGCGCCTTACCCTTCCCATCCATCATTGAGGCTAGGTCTTCAGGTGGTACCATGTTTGG
CAGCCTTACCACATACCCCAATCCCTGGAGGTTTCTACAATTAGGCAGGGTCAATCGTATTATCACTCTTCACCAAACACAAGGAAAAGGGTCGACGCCTGAATACTCTA
GGCAAAAAAGAAGACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGGATATGAGCGTCTACTTCAACGTGGATGCCATTAACAAACTGTACGACTCCATGAACGTGGAAACGCCATGGCATGCCTTGGTGACTAGACCTTTAAAGAG
GCAGGCTAGGAAAGCGTTAGAGACGATTGCGTGGTCTTGGGCGGAATGGAAAATCACTCAAACTGGAAAATATCAACTGTACCCATACCAGCTAACCACTAAGACAAACA
TGTGGAACTTCTTCATTAAAAAGAAAATCATGCCAACGTGTCACGACAGCACTATGTCGCTAAAGTACGTGATGATGATCTATTGCATCATGAAGCAGTTGGCAGTTGAT
ATTGGCACAATCATGAGCGATTCTCTTCTTGGATGGATGGAAGCTCCCAAGGGCGCCTTACCCTTCCCATCCATCATTGAGGCTAGGTCTTCAGGTGGTACCATGTTTGG
CAGCCTTACCACATACCCCAATCCCTGGAGGTTTCTACAATTAGGCAGGGTCAATCGTATTATCACTCTTCACCAAACACAAGGAAAAGGGTCGACGCCTGAATACTCTA
GGCAAAAAAGAAGACACTAG
Protein sequenceShow/hide protein sequence
MVEDMSVYFNVDAINKLYDSMNVETPWHALVTRPLKRQARKALETIAWSWAEWKITQTGKYQLYPYQLTTKTNMWNFFIKKKIMPTCHDSTMSLKYVMMIYCIMKQLAVD
IGTIMSDSLLGWMEAPKGALPFPSIIEARSSGGTMFGSLTTYPNPWRFLQLGRVNRIITLHQTQGKGSTPEYSRQKRRH