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PI0025822 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025822
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10168286..10168450
RNA-Seq ExpressionPI0025822
SyntenyPI0025822
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060101.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN  + DD+DE DST+ATT G++IHYIETS+ W+ WRDELVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-1368.52Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+L E+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.4e-1368.52Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+L E+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
TYK09570.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-1370.37Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+LVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
XP_008442271.1 PREDICTED: uncharacterized protein LOC103486178 [Cucumis melo]1.2e-1372.22Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN  + DD+DE DST+ATT G++IHYIETS+ W+ WRDELVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A1S3B5B3 uncharacterized protein LOC1034861785.7e-1472.22Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN  + DD+DE DST+ATT G++IHYIETS+ W+ WRDELVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
A0A5A7VJX3 Retrotransposon protein1.7e-1368.52Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+L E+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
A0A5D3BL48 Putative nuclease HARBI11.7e-1368.52Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+L E+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
A0A5D3CA52 Putative nuclease HARBI15.7e-1472.22Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN  + DD+DE DST+ATT G++IHYIETS+ W+ WRDELVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
A0A5D3CE09 Putative nuclease HARBI11.3e-1370.37Show/hide
Query:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
        MTN ++ D++DE DST+ATT+ ++IHYIETS+ WSQWRD+LVE+MFSDWELRNQ
Subjt:  MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGAAGTAGCAGACGACGTTGATGAGGGTGACTCTACATACGCCACCACTAGCGGTGAAGAAATTCACTACATAGAGACGTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGTCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGAAGTAGCAGACGACGTTGATGAGGGTGACTCTACATACGCCACCACTAGCGGTGAAGAAATTCACTACATAGAGACGTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGTCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNEVADDVDEGDSTYATTSGEEIHYIETSSAWSQWRDELVEKMFSDWELRNQ