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PI0025845 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025845
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:16551489..16553773
RNA-Seq ExpressionPI0025845
SyntenyPI0025845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034956.1 F5J5.1 [Cucumis melo var. makuwa]1.1e-4847.39Show/hide
Query:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV
        P  +    +   ++I+T+ G +K+P ++  VPIDG+S H EENV++WK+VV R LA E  +S+ H  CL +M+LI KAGL  T  ++GPF+L+L+REF+V
Subjt:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV

Query:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI
        NLP  F+DPS  ++  VH+RG  F ISP V N FLG  +  +F+   PS D LT+ L GGT+  WP  + + VA LSV Y ILHKIG+ +W PS HAS++
Subjt:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI

Query:  SPILANLIYKI
        S  L   +Y+I
Subjt:  SPILANLIYKI

KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]1.7e-4947.71Show/hide
Query:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL
        PPK K     ++++T+   +KIPT+V +VPIDG+SFH+EE+V++WKFV++R +     +SD +Q C+ +MDLI KAGL  T+ N+GPF+ +L+REF+VNL
Subjt:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL

Query:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP
        P  F+DPSS D+  VH+RG  F ISP VIN FL  ++  + +   P  + L T L+GGT+  WP    +  A LSV YAILHKI + +W PS HAS+IS 
Subjt:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP

Query:  ILANLIYKIGTGHPVNFG
         L   +Y+I     VN G
Subjt:  ILANLIYKIGTGHPVNFG

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]1.3e-4940.91Show/hide
Query:  ADDACESSSFEPSQTSDIESPTTSL-DPSDS-SHSPSLSSFPSSVSLSSSE----DNIVLSELLKLRNQPSKPSTSAPSESNSNPNPTPSSPPTSSNPPP
        AD A    + E S +  + SP   + DP DS +  P+ SS P   + + SE    DN+   E +     P   +   P     +P+    +PP  + P P
Subjt:  ADDACESSSFEPSQTSDIESPTTSL-DPSDS-SHSPSLSSFPSSVSLSSSE----DNIVLSELLKLRNQPSKPSTSAPSESNSNPNPTPSSPPTSSNPPP

Query:  KPK-----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNLP
          K      ++I+T+ G +KIP ++ +VPI+G+SFH EENV++WKFVV+R +A E  +SD H  C+ +M+LI KAGL  T+ ++GPF+ +L+REF+VNLP
Subjt:  KPK-----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNLP

Query:  SSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISPI
        + F+DPSSP++  VH++G  F ISP VIN FLG ++  NF+   P+ D L   L+GG +  WP    + V  LSV Y ILHKIG+ +W PS HAS++S  
Subjt:  SSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISPI

Query:  LANLIYKI
        L   +Y+I
Subjt:  LANLIYKI

TYK21311.1 F5J5.1 [Cucumis melo var. makuwa]1.1e-4847.39Show/hide
Query:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV
        P  +    +   ++I+T+ G +K+P ++  VPIDG+S H EENV++WK+VV R LA E  +S+ H  CL +M+LI KAGL  T  ++GPF+L+L+REF+V
Subjt:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV

Query:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI
        NLP  F+DPS  ++  VH+RG  F ISP V N FLG  +  +F+   PS D LT+ L GGT+  WP  + + VA LSV Y ILHKIG+ +W PS HAS++
Subjt:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI

Query:  SPILANLIYKI
        S  L   +Y+I
Subjt:  SPILANLIYKI

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]1.7e-4947.71Show/hide
Query:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL
        PPK K     ++++T+   +KIPT+V +VPIDG+SFH+EE+V++WKFV++R +     +SD +Q C+ +MDLI KAGL  T+ N+GPF+ +L+REF+VNL
Subjt:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL

Query:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP
        P  F+DPSS D+  VH+RG  F ISP VIN FL  ++  + +   P  + L T L+GGT+  WP    +  A LSV YAILHKI + +W PS HAS+IS 
Subjt:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP

Query:  ILANLIYKIGTGHPVNFG
         L   +Y+I     VN G
Subjt:  ILANLIYKIGTGHPVNFG

TrEMBL top hitse value%identityAlignment
A0A5A7SYI8 F5J5.15.4e-4947.39Show/hide
Query:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV
        P  +    +   ++I+T+ G +K+P ++  VPIDG+S H EENV++WK+VV R LA E  +S+ H  CL +M+LI KAGL  T  ++GPF+L+L+REF+V
Subjt:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV

Query:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI
        NLP  F+DPS  ++  VH+RG  F ISP V N FLG  +  +F+   PS D LT+ L GGT+  WP  + + VA LSV Y ILHKIG+ +W PS HAS++
Subjt:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI

Query:  SPILANLIYKI
        S  L   +Y+I
Subjt:  SPILANLIYKI

A0A5A7TK74 Uncharacterized protein8.4e-5047.71Show/hide
Query:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL
        PPK K     ++++T+   +KIPT+V +VPIDG+SFH+EE+V++WKFV++R +     +SD +Q C+ +MDLI KAGL  T+ N+GPF+ +L+REF+VNL
Subjt:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL

Query:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP
        P  F+DPSS D+  VH+RG  F ISP VIN FL  ++  + +   P  + L T L+GGT+  WP    +  A LSV YAILHKI + +W PS HAS+IS 
Subjt:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP

Query:  ILANLIYKIGTGHPVNFG
         L   +Y+I     VN G
Subjt:  ILANLIYKIGTGHPVNFG

A0A5A7VFF7 Uncharacterized protein6.4e-5040.91Show/hide
Query:  ADDACESSSFEPSQTSDIESPTTSL-DPSDS-SHSPSLSSFPSSVSLSSSE----DNIVLSELLKLRNQPSKPSTSAPSESNSNPNPTPSSPPTSSNPPP
        AD A    + E S +  + SP   + DP DS +  P+ SS P   + + SE    DN+   E +     P   +   P     +P+    +PP  + P P
Subjt:  ADDACESSSFEPSQTSDIESPTTSL-DPSDS-SHSPSLSSFPSSVSLSSSE----DNIVLSELLKLRNQPSKPSTSAPSESNSNPNPTPSSPPTSSNPPP

Query:  KPK-----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNLP
          K      ++I+T+ G +KIP ++ +VPI+G+SFH EENV++WKFVV+R +A E  +SD H  C+ +M+LI KAGL  T+ ++GPF+ +L+REF+VNLP
Subjt:  KPK-----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNLP

Query:  SSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISPI
        + F+DPSSP++  VH++G  F ISP VIN FLG ++  NF+   P+ D L   L+GG +  WP    + V  LSV Y ILHKIG+ +W PS HAS++S  
Subjt:  SSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISPI

Query:  LANLIYKI
        L   +Y+I
Subjt:  LANLIYKI

A0A5D3DCC3 F5J5.15.4e-4947.39Show/hide
Query:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV
        P  +    +   ++I+T+ G +K+P ++  VPIDG+S H EENV++WK+VV R LA E  +S+ H  CL +M+LI KAGL  T  ++GPF+L+L+REF+V
Subjt:  PTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVV

Query:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI
        NLP  F+DPS  ++  VH+RG  F ISP V N FLG  +  +F+   PS D LT+ L GGT+  WP  + + VA LSV Y ILHKIG+ +W PS HAS++
Subjt:  NLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTI

Query:  SPILANLIYKI
        S  L   +Y+I
Subjt:  SPILANLIYKI

A0A5D3DTI5 Uncharacterized protein8.4e-5047.71Show/hide
Query:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL
        PPK K     ++++T+   +KIPT+V +VPIDG+SFH+EE+V++WKFV++R +     +SD +Q C+ +MDLI KAGL  T+ N+GPF+ +L+REF+VNL
Subjt:  PPKPK----NKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFFLKLVREFVVNL

Query:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP
        P  F+DPSS D+  VH+RG  F ISP VIN FL  ++  + +   P  + L T L+GGT+  WP    +  A LSV YAILHKI + +W PS HAS+IS 
Subjt:  PSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTISP

Query:  ILANLIYKIGTGHPVNFG
         L   +Y+I     VN G
Subjt:  ILANLIYKIGTGHPVNFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAACACCTTGTCAAAAAGTTTGGCCTTGACAAGGCTCAATCTAAGCGTACTCCTGCTAGCACCAACACAAAGCAGACAAAGGATTGTAATGGAGAAGCGATGGAA
GAAAGACAATGTGACCATTGCCGATGATGCATGTGAGTCCTCCTCTTTCGAACCATCTCAAACGTCCGATATTGAAAGTCCTACAACTTCGTTGGATCCGTCTGACTCTT
CTCATAGTCCGTCTTTGTCTTCCTTTCCATCATCTGTGTCGCTGTCCAGTTCTGAGGACAACATTGTCTTGTCTGAGCTTCTAAAGCTGAGAAACCAACCCTCAAAACCT
TCTACCTCTGCTCCGTCTGAGTCTAACTCTAATCCTAATCCGACACCTTCCTCTCCACCTACTTCCTCCAATCCGCCGCCCAAGCCTAAGAACAAACATATCTCCACTCG
TTATGGCCATCGCAAAATTCCCACTCATGTGGCCACGGTGCCTATTGATGGAGTCTCTTTCCATAATGAAGAAAACGTTAGAAAGTGGAAGTTTGTTGTGCGAAGACATC
TTGCTGCTGAATTCGAAGTTTCAGATGATCATCAGTTTTGCCTGCCTGTCATGGACTTAATCACCAAGGCTGGTCTTCTTCCCACAGTAATTAATCTTGGCCCCTTCTTC
CTTAAACTGGTTCGAGAGTTTGTGGTGAACCTACCCTCATCTTTTGACGACCCAAGTAGTCCTGATCACTTTAAAGTACATGTTCGGGGCATTTGCTTTGATATATCCCC
TAATGTCATTAACAACTTTCTTGGCATATCTCTTCCTACTAACTTTGCAGATTTCAGACCCTCCTTTGATGCTCTTACTACTAAGCTAACAGGAGGAACTGTCATCGAGT
GGCCAGCAACTAGTCACCTCCAAGTAGCAAAACTTAGTGTAATATATGCTATCCTGCACAAGATTGGCCTTCATAGTTGGGTTCCGTCCTTACATGCCTCAACTATTTCA
CCAATTTTAGCCAACCTGATCTACAAAATTGGCACAGGACACCCTGTCAACTTTGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAACACCTTGTCAAAAAGTTTGGCCTTGACAAGGCTCAATCTAAGCGTACTCCTGCTAGCACCAACACAAAGCAGACAAAGGATTGTAATGGAGAAGCGATGGAA
GAAAGACAATGTGACCATTGCCGATGATGCATGTGAGTCCTCCTCTTTCGAACCATCTCAAACGTCCGATATTGAAAGTCCTACAACTTCGTTGGATCCGTCTGACTCTT
CTCATAGTCCGTCTTTGTCTTCCTTTCCATCATCTGTGTCGCTGTCCAGTTCTGAGGACAACATTGTCTTGTCTGAGCTTCTAAAGCTGAGAAACCAACCCTCAAAACCT
TCTACCTCTGCTCCGTCTGAGTCTAACTCTAATCCTAATCCGACACCTTCCTCTCCACCTACTTCCTCCAATCCGCCGCCCAAGCCTAAGAACAAACATATCTCCACTCG
TTATGGCCATCGCAAAATTCCCACTCATGTGGCCACGGTGCCTATTGATGGAGTCTCTTTCCATAATGAAGAAAACGTTAGAAAGTGGAAGTTTGTTGTGCGAAGACATC
TTGCTGCTGAATTCGAAGTTTCAGATGATCATCAGTTTTGCCTGCCTGTCATGGACTTAATCACCAAGGCTGGTCTTCTTCCCACAGTAATTAATCTTGGCCCCTTCTTC
CTTAAACTGGTTCGAGAGTTTGTGGTGAACCTACCCTCATCTTTTGACGACCCAAGTAGTCCTGATCACTTTAAAGTACATGTTCGGGGCATTTGCTTTGATATATCCCC
TAATGTCATTAACAACTTTCTTGGCATATCTCTTCCTACTAACTTTGCAGATTTCAGACCCTCCTTTGATGCTCTTACTACTAAGCTAACAGGAGGAACTGTCATCGAGT
GGCCAGCAACTAGTCACCTCCAAGTAGCAAAACTTAGTGTAATATATGCTATCCTGCACAAGATTGGCCTTCATAGTTGGGTTCCGTCCTTACATGCCTCAACTATTTCA
CCAATTTTAGCCAACCTGATCTACAAAATTGGCACAGGACACCCTGTCAACTTTGGATAG
Protein sequenceShow/hide protein sequence
MLNTLSKSLALTRLNLSVLLLAPTQSRQRIVMEKRWKKDNVTIADDACESSSFEPSQTSDIESPTTSLDPSDSSHSPSLSSFPSSVSLSSSEDNIVLSELLKLRNQPSKP
STSAPSESNSNPNPTPSSPPTSSNPPPKPKNKHISTRYGHRKIPTHVATVPIDGVSFHNEENVRKWKFVVRRHLAAEFEVSDDHQFCLPVMDLITKAGLLPTVINLGPFF
LKLVREFVVNLPSSFDDPSSPDHFKVHVRGICFDISPNVINNFLGISLPTNFADFRPSFDALTTKLTGGTVIEWPATSHLQVAKLSVIYAILHKIGLHSWVPSLHASTIS
PILANLIYKIGTGHPVNFG