; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025888 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025888
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr06:12537255..12538046
RNA-Seq ExpressionPI0025888
SyntenyPI0025888
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]1.1e-11280.63Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF +LRDN LFAN+KKCVIAHS+IQYLGH IS +GV+ADEEKI  M+ WP+PKDVTGL+GFLGL+GYYRRFV+GYGEI+APLT+ LQKN+F W E+AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE LK AM TIPVLALP+W LPF+IETDASG GLGAVLSQ GHPIAF +QKLS R QAKSIYERELMVVVLSVQKWRHYLLGRKF +ISDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS +E SLE+  +TT GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]5.7e-11481.03Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF ILRD++LFANR KCVIAHSQ+QYLGH IS RGVEADE+KI  M+NWP+PKD+TGL+GFLGLTGYYRRFV+ YGEI+APLTK LQKNAF+W+EEAT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AF+ LK AM T+PVLALPDW  PF IETDASGVGLGAVLSQ GHPIAF +QKLSPR Q KSIYERELM VVLSVQKWRHYLLGRKF ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNKVADALS  + S+EL  +TT GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

TYK15071.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-11280.24Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFENLK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-11279.84Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

XP_031745419.1 uncharacterized protein LOC116405630 [Cucumis sativus]5.7e-11481.03Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF ILRD++LFANR KCVIAHSQ+QYLGH IS RGVEADE+KI  M+NWP+PKD+TGL+GFLGLTGYYRRFV+ YGEI+APLTK LQKNAF+W+EEAT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AF+ LK AM T+PVLALPDW  PF IETDASGVGLGAVLSQ GHPIAF +QKLSPR Q KSIYERELM VVLSVQKWRHYLLGRKF ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNKVADALS  + S+EL  +TT GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

TrEMBL top hitse value%identityAlignment
A0A5D3BBH7 Ty3/gypsy retrotransposon protein2.0e-11279.84Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

A0A5D3CT96 Ty3/gypsy retrotransposon protein5.2e-11380.24Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFENLK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

A0A5D3DWA9 Ty3/gypsy retrotransposon protein2.0e-11279.84Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

A0A5D3DZK6 Ty3/gypsy retrotransposon protein2.0e-11279.84Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

A0A5D3E325 Ty3/gypsy retrotransposon protein2.0e-11279.84Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK
        MVF  LRDNQL+ANRKKCV AHSQI YLGH ISK GVEAD++K+  M+ WPKPKDVTGL+GFLGLTGYYRRFV+GYGEI+APLTK LQKNAF W E AT 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATK

Query:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE
        AFE+LK+AM TIPVLALPDW LPF+IETDASG GLGAVLSQ  HPIAF +QKLS R QAKSIYERELM VVLSVQKWRHYLLGR+F ++SDQKALKFLLE
Subjt:  AFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI
        QREVQPQFQKWLTKLLGYDFEILYQP LQNK ADALS ++ S+EL+ ++T GI
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSLELRLITTPGI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.63.0e-4137.66Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFY--WSEEA
        +VF  L    L     KC     +  +LGH ++  G++ + EKI  +  +P P     +K FLGLTGYYR+F+  + +I+ P+TK L+KN      + E 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFY--WSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL
          AF+ LK  +   P+L +PD+   F + TDAS V LGAVLSQ GHP++++++ L+      S  E+EL+ +V + + +RHYLLGR F + SD + L +L
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL

Query:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
           ++   +  +W  KL  +DF+I Y    +N VADALS
Subjt:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P10401 Retrovirus-related Pol polyprotein from transposon gypsy1.2e-3232Show/hide
Query:  VFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLT-----------KHLQKN
        V   L D  +  +++K       ++YLG  +SK G ++D EK+  +  +P+P  V  ++ FLGL  YYR F++ +  I+ P+T           KH+ K 
Subjt:  VFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLT-----------KHLQKN

Query:  -AFYWSEEATKAFENLKNAMVTIPV-LALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLG-RKFI
            ++E    AF+ L+N + +  V L  PD+  PF + TDAS  G+GAVLSQ+G PI  +++ L    Q  +  EREL+ +V ++ K +++L G R+  
Subjt:  -AFYWSEEATKAFENLKNAMVTIPV-LALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLG-RKFI

Query:  VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
        + +D + L F +  R    + ++W + +  ++ ++ Y+P  +N VADALS
Subjt:  VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P20825 Retrovirus-related Pol polyprotein from transposon 2971.1e-4337.66Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSE--EA
        +VF  L D  L     KC     +  +LGH ++  G++ +  K+  ++++P P     ++ FLGLTGYYR+F+  Y +I+ P+T  L+K     ++  E 
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSE--EA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL
         +AFE LK  ++  P+L LPD+   F++ TDAS + LGAVLSQ GHPI+F+++ L+      S  E+EL+ +V + + +RHYLLGR+F++ SD + L++L
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFL

Query:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS
           +E   + ++W  +L  Y F+I Y    +N VADALS
Subjt:  LEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALS

P92523 Uncharacterized mitochondrial protein AtMg008604.7e-3455.91Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEA
        MV  I   +Q +ANRKKC     QI YLG  H IS  GV AD  K+  M+ WP+PK+ T L+GFLGLTGYYRRFV+ YG+I  PLT+ L+KN+  W+E A
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFI
          AF+ LK A+ T+PVLALPD  LPF+
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.8e-3331.54Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLT------------KHLQ
        +V   L    L  N +K     +Q+++LG+ ++  G++AD +K+  +   P P  V  LK FLG+T YYR+F++ Y +++ PLT                
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLT------------KHLQ

Query:  KNAFYWSEEATKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQ----QGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGR
        K      E A ++F +LK+ + +  +LA P +  PF + TDAS   +GAVLSQ    +  PIA++++ L+   +  +  E+E++ ++ S+   R YL G 
Subjt:  KNAFYWSEEATKAFENLKNAMVTIPVLALPDWPLPFIIETDASGVGLGAVLSQ----QGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGR

Query:  KFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSL
          I V +D + L F L  R    + ++W  ++  Y+ E++Y+P   N VADALS + P L
Subjt:  KFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPSLQNKVADALSILEPSL

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.3e-3555.91Show/hide
Query:  MVFVILRDNQLFANRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEA
        MV  I   +Q +ANRKKC     QI YLG  H IS  GV AD  K+  M+ WP+PK+ T L+GFLGLTGYYRRFV+ YG+I  PLT+ L+KN+  W+E A
Subjt:  MVFVILRDNQLFANRKKCVIAHSQIQYLG--HWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEA

Query:  TKAFENLKNAMVTIPVLALPDWPLPFI
          AF+ LK A+ T+PVLALPD  LPF+
Subjt:  TKAFENLKNAMVTIPVLALPDWPLPFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTGTTATCCTTCGTGATAACCAATTATTCGCCAATCGAAAGAAGTGTGTTATAGCCCACTCACAGATACAATATCTGGGCCACTGGATATCCAAAAGAGGAGT
AGAGGCAGATGAAGAAAAGATCAGTGTGATGATGAACTGGCCCAAACCGAAAGATGTTACTGGCTTGAAAGGATTCTTGGGATTAACTGGATACTATAGAAGATTTGTGC
GTGGATATGGAGAAATTTCAGCTCCCCTTACCAAACATTTACAAAAGAATGCATTCTACTGGAGTGAGGAGGCCACAAAAGCTTTTGAAAATCTGAAAAATGCCATGGTA
ACCATCCCTGTTCTTGCCCTACCTGACTGGCCTCTTCCATTCATAATCGAAACCGATGCTTCCGGCGTTGGATTAGGAGCAGTTCTTTCACAACAGGGCCACCCTATTGC
TTTTTTAAATCAGAAGTTATCCCCACGGACTCAAGCCAAATCTATTTACGAGAGAGAACTAATGGTTGTGGTACTTTCAGTCCAAAAATGGAGACACTATCTTTTAGGAA
GGAAATTCATTGTAATATCTGATCAGAAAGCTCTTAAATTCCTTTTGGAACAAAGAGAGGTCCAGCCTCAATTCCAAAAATGGCTTACCAAACTTCTGGGGTATGATTTT
GAAATCCTTTACCAACCAAGCTTACAAAATAAAGTCGCAGATGCCCTCTCCATACTAGAACCAAGCCTTGAGTTGAGACTAATAACAACACCTGGGATTAATGGACTTAG
AAGTGGCCATGAAAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTGTTATCCTTCGTGATAACCAATTATTCGCCAATCGAAAGAAGTGTGTTATAGCCCACTCACAGATACAATATCTGGGCCACTGGATATCCAAAAGAGGAGT
AGAGGCAGATGAAGAAAAGATCAGTGTGATGATGAACTGGCCCAAACCGAAAGATGTTACTGGCTTGAAAGGATTCTTGGGATTAACTGGATACTATAGAAGATTTGTGC
GTGGATATGGAGAAATTTCAGCTCCCCTTACCAAACATTTACAAAAGAATGCATTCTACTGGAGTGAGGAGGCCACAAAAGCTTTTGAAAATCTGAAAAATGCCATGGTA
ACCATCCCTGTTCTTGCCCTACCTGACTGGCCTCTTCCATTCATAATCGAAACCGATGCTTCCGGCGTTGGATTAGGAGCAGTTCTTTCACAACAGGGCCACCCTATTGC
TTTTTTAAATCAGAAGTTATCCCCACGGACTCAAGCCAAATCTATTTACGAGAGAGAACTAATGGTTGTGGTACTTTCAGTCCAAAAATGGAGACACTATCTTTTAGGAA
GGAAATTCATTGTAATATCTGATCAGAAAGCTCTTAAATTCCTTTTGGAACAAAGAGAGGTCCAGCCTCAATTCCAAAAATGGCTTACCAAACTTCTGGGGTATGATTTT
GAAATCCTTTACCAACCAAGCTTACAAAATAAAGTCGCAGATGCCCTCTCCATACTAGAACCAAGCCTTGAGTTGAGACTAATAACAACACCTGGGATTAATGGACTTAG
AAGTGGCCATGAAAGAGGTTGA
Protein sequenceShow/hide protein sequence
MVFVILRDNQLFANRKKCVIAHSQIQYLGHWISKRGVEADEEKISVMMNWPKPKDVTGLKGFLGLTGYYRRFVRGYGEISAPLTKHLQKNAFYWSEEATKAFENLKNAMV
TIPVLALPDWPLPFIIETDASGVGLGAVLSQQGHPIAFLNQKLSPRTQAKSIYERELMVVVLSVQKWRHYLLGRKFIVISDQKALKFLLEQREVQPQFQKWLTKLLGYDF
EILYQPSLQNKVADALSILEPSLELRLITTPGINGLRSGHERG