; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025903 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025903
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlycine-rich cell wall structural protein 1-like
Genome locationchr01:19988359..19988972
RNA-Seq ExpressionPI0025903
SyntenyPI0025903
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050569.1 glycine-rich cell wall structural protein 1-like [Cucumis melo var. makuwa]4.5e-3993.91Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLFIALLLAL+ATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGGVGGVVGGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSGVGGG 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
        G GVGVGGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

KAE8646238.1 hypothetical protein Csa_015546 [Cucumis sativus]2.4e-3284.35Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGG+GGV+GGTG GGLGGG+GGATGI       GGAAGGLGSG GG  
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
          GVG+GGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

XP_008462002.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]1.0e-3893.04Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLF+ALLLAL+ATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGGVGGVVGGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSGVGGG 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
        G GVGVGGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

XP_011659167.2 glycine-rich protein 5 [Cucumis sativus]6.1e-3689.57Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGG+GGV+GGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSG GG  
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
          GVG+GGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

XP_038899239.1 glycine-rich protein 5-like [Benincasa hispida]3.7e-3387.07Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-GGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGG
        MAKLF+ALLLALVATHALARP TP TTF+DQKNFL+YGGLG YSGIGSNGLPFGGVGG +GGTGL GGLGGG+GGATG+GGLGGSGGGAAGGLG G GGG
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-GGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGG

Query:  VGSGVGVGGGSGLTNP
         G+GVGVGGGSGLTNP
Subjt:  VGSGVGVGGGSGLTNP

TrEMBL top hitse value%identityAlignment
A0A0A0K6P3 Uncharacterized protein3.0e-3689.57Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLFIALLLALVATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGG+GGV+GGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSG GG  
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
          GVG+GGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

A0A0A0K9U1 Uncharacterized protein9.3e-2266.67Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-----GGLGGGIGGATGI----GGLGGSG------
        MAKLF+ALLLALVATHALARP     TF DQKNFL+YGG+GGYSGIG+NGLPFGG+GG +GG GL     GGLGGG+GG TGI    GGLGG G      
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-----GGLGGGIGGATGI----GGLGGSG------

Query:  GGAAGGLGSGVGGGVGSGV--GVGGGSGLTNP
        GG  GGLG G+GGG+G G+  GVGG SG+T P
Subjt:  GGAAGGLGSGVGGGVGSGV--GVGGGSGLTNP

A0A1S3CFV5 glycine-rich cell wall structural protein 1-like4.9e-3993.04Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLF+ALLLAL+ATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGGVGGVVGGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSGVGGG 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
        G GVGVGGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

A0A5A7U5T7 Acanthoscurrin-1-like3.8e-2367.42Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-GGLGGGIGGATGI--------------GGLGGSG
        MAKLF+ALLLALVATHALARP     TF DQKNFL+YGG+GGYSGIGSNGLPFGGVGG +GG GL GGLGGG+GGATGI              GG+GG+ 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGL-GGLGGGIGGATGI--------------GGLGGSG

Query:  GGAAGGLGSGVGGGVGSGV--GVGGGSGLTNP
        GG  GGLG G+GGG+G G+  GVGG SG+T P
Subjt:  GGAAGGLGSGVGGGVGSGV--GVGGGSGLTNP

A0A5D3D5H6 Glycine-rich cell wall structural protein 1-like2.2e-3993.91Show/hide
Query:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV
        MAKLFIALLLAL+ATHALARPITPGTTFDDQKNFL+YGGLGGYSGIGSNGLPFGGVGGVVGGTG GGLGGG+GGATGIGGLGG GGGAAGGLGSGVGGG 
Subjt:  MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGV

Query:  GSGVGVGGGSGLTNP
        G GVGVGGGSGLTNP
Subjt:  GSGVGVGGGSGLTNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32690.2 glycine-rich protein 238.6e-0460.81Show/hide
Query:  GGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGVGSGVGVGGGSG
        GGLGG SG+G  G   GG+GG  GG   GG GGG+GG  GIGG GG GGG  GG G G GGG G G+G GGG G
Subjt:  GGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGVGSGVGVGGGSG

AT4G29020.1 glycine-rich protein7.8e-0546.03Show/hide
Query:  MAKLFIALLLALVATHALARPI-TPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTG-------LGGLGGGIGG-ATGIGGLGGSGG-GAAG
        +A   +AL+++   T     P    G   DDQKNF+++ G+GG +GIG  G    G+GGV GG G       +GG+GGGIGG   G+GGLGG GG G   
Subjt:  MAKLFIALLLALVATHALARPI-TPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTG-------LGGLGGGIGG-ATGIGGLGGSGG-GAAG

Query:  GLGSGVGG-----GVGSGVGVGGGSG
        GLG GVGG     G+GSG+G  GG+G
Subjt:  GLGSGVGG-----GVGSGVGVGGGSG

AT4G29030.1 Putative membrane lipoprotein5.8e-0857.39Show/hide
Query:  MAKLFIALLLALVATHAL---ARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLG-GGIGGATGIGGLGGS-GGGAAGGLGSG
        MAK F  + L      AL   AR +  G    DQKN+L YG  GGYSG+G NGLPFGGVGG V G G G LG GG GGA   GGLGG  GGGA  GLG G
Subjt:  MAKLFIALLLALVATHAL---ARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLG-GGIGGATGIGGLGGS-GGGAAGGLGSG

Query:  VGGGVGSGVGVGGGS
        +GGG G G G  GGS
Subjt:  VGGGVGSGVGVGGGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAATTGTTCATTGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCCTAGCTAGACCTATTACGCCGGGCACCACCTTCGACGACCAAAAGAACTTCCTCAGTTA
CGGTGGTCTCGGTGGCTACTCTGGCATTGGCAGCAATGGCCTCCCCTTCGGTGGGGTGGGAGGTGTTGTTGGAGGAACTGGCCTCGGTGGTCTTGGTGGTGGCATCGGTG
GCGCTACTGGAATCGGTGGACTTGGAGGCTCGGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGGAGTTGGTGGAGGAGTTGGTAGTGGAGTCGGTGTTGGCGGTGGTTCT
GGTCTTACTAATCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACACACAAGTGTAAGTCTTAGACAAAAAATTAAGAAGAAGAAAATGGCCAAATTGTTCATTGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCCTAGCTAGACCTA
TTACGCCGGGCACCACCTTCGACGACCAAAAGAACTTCCTCAGTTACGGTGGTCTCGGTGGCTACTCTGGCATTGGCAGCAATGGCCTCCCCTTCGGTGGGGTGGGAGGT
GTTGTTGGAGGAACTGGCCTCGGTGGTCTTGGTGGTGGCATCGGTGGCGCTACTGGAATCGGTGGACTTGGAGGCTCGGGAGGTGGAGCTGCCGGTGGACTCGGAAGCGG
AGTTGGTGGAGGAGTTGGTAGTGGAGTCGGTGTTGGCGGTGGTTCTGGTCTTACTAATCCTTGAAGTTATTTTAATTTCGTTTCATTTCTACTCAAAATGTTGTTCAAGT
GTGAAGTTTAGTTATTTTGCCTTAAGTGGACTAGTATGAATCTATGCATTTGTTATATTTTCTTCCTTTAGTTCATGAGAATTTCATTAAATTTTATTGTTTGATGTTGC
GTTAATTATAACGTTGTTGATTTTAGTTGATTTTTAAATTAATTATATGCCCATGTTAGAAATA
Protein sequenceShow/hide protein sequence
MAKLFIALLLALVATHALARPITPGTTFDDQKNFLSYGGLGGYSGIGSNGLPFGGVGGVVGGTGLGGLGGGIGGATGIGGLGGSGGGAAGGLGSGVGGGVGSGVGVGGGS
GLTNP