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PI0025916 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025916
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr07:19343544..19344698
RNA-Seq ExpressionPI0025916
SyntenyPI0025916
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]8.9e-2866Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNSM P+V +QLMGF   +DLW+A ++   +QSRAEEDF R   QTTRKGN KME+YL +MKTN DNLGQ GSPVP  +LISQ LLGLDEVYN V +VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
KAA0057475.1 uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa]1.1e-3380Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNSM P+V LQLMGFNTAKDLWEAI+N   I+SRAEE F RHTFQTTR+GN KMEDYLRIMK NADNLGQAGSPVP   LISQ LLGLDEVYN VT VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
KAA0060208.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.5e-3279.79Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYN
        +YNSM  EV  QLMGFNTAKDL EAI++   +QSR EEDF RHTFQTTRKGN KMEDYLRIMKTNA+NLGQAGSP+PL SLISQ LLGLDEVYN
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYN
KGN44003.1 hypothetical protein Csa_016232 [Cucumis sativus]2.3e-3177.08Show/hide
Query:  MEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        M PEV LQLMGFNTAKDLWEAI++   +Q RAEEDF RHTFQTT+KGN KMEDYL  MKTN DNL QAGS VPLHSLISQ +LGLDE+YN VT VI
Subjt:  MEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]4.3e-3071Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNS+ PEVV+QL+GF  AKD+WEA  +   ++SRAEEDF R TFQTTRKGN  MEDYLRIMKTNADNLGQA SP+P  +LISQ LLGLDEVYN V +VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
TrEMBL top hitse value%identityAlignment
A0A0A0K3F9 Uncharacterized protein1.1e-3177.08Show/hide
Query:  MEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        M PEV LQLMGFNTAKDLWEAI++   +Q RAEEDF RHTFQTT+KGN KMEDYL  MKTN DNL QAGS VPLHSLISQ +LGLDE+YN VT VI
Subjt:  MEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
A0A0A0LXB7 Uncharacterized protein2.1e-3071Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNS+ PEVV+QL+GF  AKD+WEA  +   ++SRAEEDF R TFQTTRKGN  MEDYLRIMKTNADNLGQA SP+P  +LISQ LLGLDEVYN V +VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
A0A5A7SIT7 Uncharacterized protein4.3e-2866Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNSM P+V +QLMGF   +DLW+A ++   +QSRAEEDF R   QTTRKGN KME+YL +MKTN DNLGQ GSPVP  +LISQ LLGLDEVYN V +VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
A0A5A7UY76 Integrase, catalytic core1.7e-3279.79Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYN
        +YNSM  EV  QLMGFNTAKDL EAI++   +QSR EEDF RHTFQTTRKGN KMEDYLRIMKTNA+NLGQAGSP+PL SLISQ LLGLDEVYN
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYN
A0A5D3E3L7 Uncharacterized protein5.3e-3480Show/hide
Query:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
        +YNSM P+V LQLMGFNTAKDLWEAI+N   I+SRAEE F RHTFQTTR+GN KMEDYLRIMK NADNLGQAGSPVP   LISQ LLGLDEVYN VT VI
Subjt:  MYNSMEPEVVLQLMGFNTAKDLWEAIKNC--IQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAATTCCATGGAACCTGAAGTTGTTCTTCAACTAATGGGATTCAATACTGCAAAAGATCTCTGGGAGGCTATCAAAAACTGCATTCAATCAAGGGCAGAAGAAGA
TTTCCACCGTCACACCTTCCAAACCACTCGGAAAGGTAATTGTAAGATGGAAGATTATTTGAGAATCATGAAAACTAATGCGGATAATCTTGGCCAAGCTGGGAGCCCTG
TTCCTCTTCATTCTTTAATTTCTCAGGCTCTATTGGGACTTGATGAAGTATACAATTCAGTCACCCTTGTAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATTCTCTCAACAAATTTCTCTCTTGATATCATAGCAGACAATGACCAATGCCTTCCCCACTCTATCTTCATCCTTGATCACAAATTTCAGCCACCCACCCCTAAATATTG
AACCAATTACCATCTACCAAACTTGGTAGAAGCCACTATCTATTATGGAAGATCTTAGCCCTCCCCATCTTAAAGAGCTACAAGACATTGGCAGGAGAAAATATCTTAAA
GAGCTACATGACATTTGACAGGAGAAACACCATGTCCTAAAAAATTCATCCAAGCTGCAATTGGAGAACCATCTGTGTTCGAAGCCACCGTTGGAACTGCGGTTGAAGCG
GCAGAAACAGCCGTTGGGACTTCCTCAAGCTCGACATCAACAAAAATTATCAATCCAAAATTTGAACAATGGGTATCTTCTTCTCCTTGGTTGGATGTACAATTCCATGG
AACCTGAAGTTGTTCTTCAACTAATGGGATTCAATACTGCAAAAGATCTCTGGGAGGCTATCAAAAACTGCATTCAATCAAGGGCAGAAGAAGATTTCCACCGTCACACC
TTCCAAACCACTCGGAAAGGTAATTGTAAGATGGAAGATTATTTGAGAATCATGAAAACTAATGCGGATAATCTTGGCCAAGCTGGGAGCCCTGTTCCTCTTCATTCTTT
AATTTCTCAGGCTCTATTGGGACTTGATGAAGTATACAATTCAGTCACCCTTGTAATCTAAGGAAAACTTGATTTCTCCTAGTTAGATATGCAATCCGAAATTTTGATTT
TTGAAAAACGACTTGAACATCAGAATTCTAAAAAAAATCCAAGTAATGTTGTTTCCAATGCTGCTGTGAATATGGTTCAAAATAGAGGAGGTGACACTCGACAAAACAAT
AACTCCCATCAGTTTAGTGGTCGCGGACGTGGCCGAGGAAGAGGAAACAAACCCACTTATTAGCTATGTGGAAAATATGGACACTCTGCCTTGGTTTGTTATAACAACTT
TAATAAGGAATATGCTGGAAATGCAAATCAAAACAGGGAAACAGTCCCAATCCAATTGTAAATTCAAACCCTGCCTTTATGACTACTCAAAATTCTAATCCCTTTGCCAC
AGTAGTTGACACTAACTGGTATGTTGACAGTGACGCAACTAATCAGGTAAACTTT
Protein sequenceShow/hide protein sequence
MYNSMEPEVVLQLMGFNTAKDLWEAIKNCIQSRAEEDFHRHTFQTTRKGNCKMEDYLRIMKTNADNLGQAGSPVPLHSLISQALLGLDEVYNSVTLVI