; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0025919 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025919
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr04:23789006..23790322
RNA-Seq ExpressionPI0025919
SyntenyPI0025919
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]2.8e-9746.19Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]4.3e-9846.67Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         I D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]9.6e-9845.56Show/hide
Query:  STSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMDL F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V 
Subjt:  STSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTH
        P K F PRP I  YF K   + D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++
Subjt:  PEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTH

Query:  WNQGIFTEKSFSKPFVSQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF   SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVSQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASSSSKSASSSIQEDEELASPEY---DLNDPFLDSQP
         N      ++ +S+ + ++L    Y   D+NDPFLD+QP
Subjt:  -NASSSSKSASSSIQEDEELASPEY---DLNDPFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]2.8e-9745.95Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]7.4e-9846.43Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein2.1e-9846.67Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         I D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7SS94 Retrotransposable element Tf21.4e-9746.19Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF    
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5A7U3G5 Polyprotein4.7e-9845.56Show/hide
Query:  STSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA
        +T SKG    S+Q+ APS MSA+ YAMDL F  V+R    S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V 
Subjt:  STSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVA

Query:  PEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTH
        P K F PRP I  YF K   + D  IEPE+   ++ E  ++IFP  FNFLPEDL KT  FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++
Subjt:  PEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTH

Query:  WNQGIFTEKSFSKPFVSQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC
        W QG+F  + FS PF   SY+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF 
Subjt:  WNQGIFTEKSFSKPFVSQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFC

Query:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----
        LYFQIPWIFCW+F       +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V     
Subjt:  LYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV-----

Query:  -NASSSSKSASSSIQEDEELASPEY---DLNDPFLDSQP
         N      ++ +S+ + ++L    Y   D+NDPFLD+QP
Subjt:  -NASSSSKSASSSIQEDEELASPEY---DLNDPFLDSQP

A0A5A7V6D1 Retrotransposable element Tf21.4e-9745.95Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
             Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

A0A5D3DW87 Polyprotein3.6e-9846.43Show/hide
Query:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV
        MSA+ YAMDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K  
Subjt:  MSADQYAMDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFKKQV

Query:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS
         + D  IEPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EITHVPDKNDPSKI YSKL+ F+ + P++W QG+F  + FS PF   S
Subjt:  AIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSKPFVSQS

Query:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP
        Y+Y+DY KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F      
Subjt:  YSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYP

Query:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE
         +K L K+L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + ++
Subjt:  QYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEE

Query:  LASPEY---DLNDPFLDSQP
        L    Y   D+NDPFLD+QP
Subjt:  LASPEY---DLNDPFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCGACTCCTCCCACAACATACTCTCAGGCTGTCGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGATCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTACTCACGTGC
CCGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAAATTTTAAAGCAATCAATCCAACTCATTGGAACCAAGGGATTTTTACAGAAAAATCCTTCTCAAAA
CCGTTTGTATCTCAATCCTACTCTTACCAGGACTACATCAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGC
CTACAAAATTAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGACGACATTTTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAA
CAATTCAAAAGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTATTTTCAAATCCCATGGATATTTTGCTGGAGTTTCAACACAGCATCCTATCCTCAATACAAAATG
CTTGTAAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTCCAGCATGCCACCATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGACCTCGA
TCAGAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATG
CCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGAAGAATTGGCAAGCCCGGAGTACGATCTGAATGATCCGTTTCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCGACTCCTCCCACAACATACTCTCAGGCTGTCGCACCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTC
AAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGATCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTACTCACGTGC
CCGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAAATTTTAAAGCAATCAATCCAACTCATTGGAACCAAGGGATTTTTACAGAAAAATCCTTCTCAAAA
CCGTTTGTATCTCAATCCTACTCTTACCAGGACTACATCAAAGCTTGGTTTAGAGTTATTTGGTTTTCTAGCAGGAACCATTCTTGGTTCATTTCCTTTTGCCAGAACGC
CTACAAAATTAATTTTCCACTATGGTTTATTCAATGGTGGAATAATTTTGGTCTTACAGACGACATTTTACCAACTCCCATTCAAGAATCCTATTTTTATTTCACAAGAA
CAATTCAAAAGAATTCTTTTCATAACTCAATGAGATTTTGTCTCTATTTTCAAATCCCATGGATATTTTGCTGGAGTTTCAACACAGCATCCTATCCTCAATACAAAATG
CTTGTAAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTCCAGCATGCCACCATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGACCTCGA
TCAGAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATG
CCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGAAGAATTGGCAAGCCCGGAGTACGATCTGAATGATCCGTTTCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MSIVRGRGRVSSTSSKGSRLSSSQNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEK
RFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEITHVPDKNDPSKIAYSKLKNFKAINPTHWNQGIFTEKSFSK
PFVSQSYSYQDYIKAWFRVIWFSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKM
LVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEELASPEYDLNDPFLDSQPM