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PI0025993 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0025993
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:26573119..26573924
RNA-Seq ExpressionPI0025993
SyntenyPI0025993
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

KAA0038122.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-7759.5Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        MA+SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        + EK L+D      V+SHP  KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN P G++ F      D     MYS  L+MSPDD+M TR+VR+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G   ++ +I+C+++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

KAA0048377.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]5.8e-7659.5Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        MA+SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        + EK L+D      V+SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

TrEMBL top hitse value%identityAlignment
A0A5A7U098 Retrotransposon protein3.3e-7759.5Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        MA+SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        + EK L+D      V+SHP  KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN P G++ F      D     MYS  L+MSPDD+M TR+VR+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G   ++ +I+C+++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

A0A5A7UME4 Retrotransposon protein4.0e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

A0A5D3C1M0 Retrotransposon protein2.8e-7659.5Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        MA+SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        + EK L+D      V+SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

A0A5D3CBF7 Retrotransposon protein4.0e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

A0A5D3DPR5 Retrotransposon protein2.4e-7558.68Show/hide
Query:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI
        M +SSR+ KH WTKEE+  LV+CLVELV++GGWRS+N TFRPGY + L +M+  ++ G NI A+TID RIK MKR F A++EMRGP+CSGFGWNDE KCI
Subjt:  MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCI

Query:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS
        +AEK ++D        SHPA KG LNK F HYD+LSYVF +DRATGGRAE+F D+GSN PPG++        D +   MYS  L+MSPDD+M TR+ R+S
Subjt:  IAEKYLYDITTTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRIS

Query:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP
        E R  SSGSKRKR G A ++ +I+ +++EY N+QL  IAEWP
Subjt:  EARVGSSGSKRKRGGQAFEATEIICSSMEYANDQLKAIAEWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCTTCAAGGGTCTCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCGTTAAATGTTTGGTGGAGTTGGTATCATCCGGCGGGTGGAGGTCGAATAA
CGAGACGTTTAGACCTGGATACCATAGTAATCTACAGAAAATGATTACCGAGAGGATGTTGGGACATAACATAACGGCTACGACAATAGATTGTCGAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAATACTTGTATGACATTACT
ACAACAACACTTGTACAGAGTCATCCAGCCAAAAAAGGCCCCCTAAACAAACTCTTTCCCCACTACGACGACCTTAGCTACGTCTTCGAAAGAGATCGTGCAACAGGAGG
TCGAGCTGAAACCTTCGGCGATGTTGGGTCAAACGTGCCTCCAGGCTTCGAAGGATTTTTGCACTATGACGGGAACGATATGGAGATCCTGACGATGTACAGTCAGGACC
TGGACATGTCACCTGACGACATAATGGGTACACGATCGGTTCGTATTTCTGAGGCTAGGGTTGGTTCGAGTGGGTCGAAGAGGAAACGGGGAGGGCAGGCATTTGAGGCA
ACAGAAATTATTTGCAGTTCCATGGAATATGCTAATGACCAGCTGAAGGCCATTGCAGAATGGCCCAAAGAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCTTCAAGGGTCTCGAAGCACCACTGGACGAAAGAGGAGGATGTCGTCCTCGTTAAATGTTTGGTGGAGTTGGTATCATCCGGCGGGTGGAGGTCGAATAA
CGAGACGTTTAGACCTGGATACCATAGTAATCTACAGAAAATGATTACCGAGAGGATGTTGGGACATAACATAACGGCTACGACAATAGATTGTCGAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAGGGGCCCATCGTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAATACTTGTATGACATTACT
ACAACAACACTTGTACAGAGTCATCCAGCCAAAAAAGGCCCCCTAAACAAACTCTTTCCCCACTACGACGACCTTAGCTACGTCTTCGAAAGAGATCGTGCAACAGGAGG
TCGAGCTGAAACCTTCGGCGATGTTGGGTCAAACGTGCCTCCAGGCTTCGAAGGATTTTTGCACTATGACGGGAACGATATGGAGATCCTGACGATGTACAGTCAGGACC
TGGACATGTCACCTGACGACATAATGGGTACACGATCGGTTCGTATTTCTGAGGCTAGGGTTGGTTCGAGTGGGTCGAAGAGGAAACGGGGAGGGCAGGCATTTGAGGCA
ACAGAAATTATTTGCAGTTCCATGGAATATGCTAATGACCAGCTGAAGGCCATTGCAGAATGGCCCAAAGAACAATGA
Protein sequenceShow/hide protein sequence
MATSSRVSKHHWTKEEDVVLVKCLVELVSSGGWRSNNETFRPGYHSNLQKMITERMLGHNITATTIDCRIKTMKRAFQAISEMRGPSCSGFGWNDELKCIIAEKYLYDIT
TTTLVQSHPAKKGPLNKLFPHYDDLSYVFERDRATGGRAETFGDVGSNVPPGFEGFLHYDGNDMEILTMYSQDLDMSPDDIMGTRSVRISEARVGSSGSKRKRGGQAFEA
TEIICSSMEYANDQLKAIAEWPKEQ