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PI0026010 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026010
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCleavage stimulation factor subunit 77 isoform X2
Genome locationchr08:2469628..2472180
RNA-Seq ExpressionPI0026010
SyntenyPI0026010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055538.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]7.0e-0839.68Show/hide
Query:  PPLKPVALPSGGTNQTH--------------QVQNPFGQP-----PIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP
        PPLK  A+P  G  + H               VQ  + QP     P H   QP  HA     PH  G EIDQLYN+  F+ GES A SKPTNL MYSKNP
Subjt:  PPLKPVALPSGGTNQTH--------------QVQNPFGQP-----PIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP

Query:  ----------RCTYAERQYGLMMAYS
                   C   +R YG ++  S
Subjt:  ----------RCTYAERQYGLMMAYS

TYK01387.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]1.6e-0756.25Show/hide
Query:  QVQNPFGQPPIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP
        Q Q+P GQP IHA             PH  G EIDQLYN+  F+ GES A SKPTNL MYSKNP
Subjt:  QVQNPFGQPPIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP

TYK23958.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.6e-0445.21Show/hide
Query:  QVQNPFGQPPIHASSQP------FFHASSSFHP----HIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKN
        Q Q P GQ  +H    P      +FHA  SF P    H+ GI +DQ++N    + GESL+QSKPT+L M+SKN
Subjt:  QVQNPFGQPPIHASSQP------FFHASSSFHP----HIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKN

TrEMBL top hitse value%identityAlignment
A0A5A7TEI5 Cleavage stimulation factor subunit 77 isoform X26.6e-0432.81Show/hide
Query:  TNQTHQVQNPFGQPPIHASSQPFFHASSS----FHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNPRCTYAERQYGLM----------MAYSK
        T++TH  + P   PP+ + S P     SS      PH+ G  IDQ++ +  F+ GES  QSKPT+L MYSKNP  ++     G             ++S+
Subjt:  TNQTHQVQNPFGQPPIHASSQPFFHASSS----FHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNPRCTYAERQYGLM----------MAYSK

Query:  -----LDLKKLIEFMTS-LKIPTPRRIY
             LD +   +F+T  L  P P+++Y
Subjt:  -----LDLKKLIEFMTS-LKIPTPRRIY

A0A5A7UKG6 UBN2_3 domain-containing protein3.4e-0839.68Show/hide
Query:  PPLKPVALPSGGTNQTH--------------QVQNPFGQP-----PIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP
        PPLK  A+P  G  + H               VQ  + QP     P H   QP  HA     PH  G EIDQLYN+  F+ GES A SKPTNL MYSKNP
Subjt:  PPLKPVALPSGGTNQTH--------------QVQNPFGQP-----PIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP

Query:  ----------RCTYAERQYGLMMAYS
                   C   +R YG ++  S
Subjt:  ----------RCTYAERQYGLMMAYS

A0A5D3BPW7 UBN2_3 domain-containing protein7.6e-0856.25Show/hide
Query:  QVQNPFGQPPIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP
        Q Q+P GQP IHA             PH  G EIDQLYN+  F+ GES A SKPTNL MYSKNP
Subjt:  QVQNPFGQPPIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNP

A0A5D3C0Q9 Cleavage stimulation factor subunit 77 isoform X26.6e-0432.81Show/hide
Query:  TNQTHQVQNPFGQPPIHASSQPFFHASSS----FHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNPRCTYAERQYGLM----------MAYSK
        T++TH  + P   PP+ + S P     SS      PH+ G  IDQ++ +  F+ GES  QSKPT+L MYSKNP  ++     G             ++S+
Subjt:  TNQTHQVQNPFGQPPIHASSQPFFHASSS----FHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNPRCTYAERQYGLM----------MAYSK

Query:  -----LDLKKLIEFMTS-LKIPTPRRIY
             LD +   +F+T  L  P P+++Y
Subjt:  -----LDLKKLIEFMTS-LKIPTPRRIY

A0A5D3DKB1 Transposon Tf2-1 polyprotein isoform X11.7e-0445.21Show/hide
Query:  QVQNPFGQPPIHASSQP------FFHASSSFHP----HIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKN
        Q Q P GQ  +H    P      +FHA  SF P    H+ GI +DQ++N    + GESL+QSKPT+L M+SKN
Subjt:  QVQNPFGQPPIHASSQP------FFHASSSFHP----HIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGTCTGAGACCACCCTTAAAGCCAGTCGCACTTCCTAGTGGAGGAACCAATCAAACGCACCAAGTCCAAAACCCTTTTGGTCAGCCACCGATCCATGCGTCATC
GCAGCCCTTTTTTCACGCGTCATCCTCGTTTCACCCGCACATCCGTGGTATCGAGATTGATCAACTCTATAATGAACCAGGGTTTCAAGGTGGTGAATCTTTGGCACAAT
CCAAACCAACCAACTTGCTGATGTATTCTAAGAACCCGAGATGCACCTATGCAGAGAGGCAGTATGGCCTAATGATGGCATACAGTAAGCTAGACTTGAAGAAGTTGATC
GAATTTATGACTTCCTTGAAGATCCCAACCCCAAGACGTATTTATATGAATGAGTCTGCTGGAACCTTTCAACCATCCAGTCCTACTATAAACCAGAACGATTCTTGTCC
ACCTTCCATTCTAGAAGCTATTCCTCAGTCAGAGCGCCGCGACACTTACGCATTTTTTGCACGGGTATTGCAACTTTGGAGAGAGCGTCTTGACACTCAAGGATTTGATG
CTCTCGGCCTTCAAGAACTATGCAATGGCACTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGTCTGAGACCACCCTTAAAGCCAGTCGCACTTCCTAGTGGAGGAACCAATCAAACGCACCAAGTCCAAAACCCTTTTGGTCAGCCACCGATCCATGCGTCATC
GCAGCCCTTTTTTCACGCGTCATCCTCGTTTCACCCGCACATCCGTGGTATCGAGATTGATCAACTCTATAATGAACCAGGGTTTCAAGGTGGTGAATCTTTGGCACAAT
CCAAACCAACCAACTTGCTGATGTATTCTAAGAACCCGAGATGCACCTATGCAGAGAGGCAGTATGGCCTAATGATGGCATACAGTAAGCTAGACTTGAAGAAGTTGATC
GAATTTATGACTTCCTTGAAGATCCCAACCCCAAGACGTATTTATATGAATGAGTCTGCTGGAACCTTTCAACCATCCAGTCCTACTATAAACCAGAACGATTCTTGTCC
ACCTTCCATTCTAGAAGCTATTCCTCAGTCAGAGCGCCGCGACACTTACGCATTTTTTGCACGGGTATTGCAACTTTGGAGAGAGCGTCTTGACACTCAAGGATTTGATG
CTCTCGGCCTTCAAGAACTATGCAATGGCACTCAATGA
Protein sequenceShow/hide protein sequence
MSSLRPPLKPVALPSGGTNQTHQVQNPFGQPPIHASSQPFFHASSSFHPHIRGIEIDQLYNEPGFQGGESLAQSKPTNLLMYSKNPRCTYAERQYGLMMAYSKLDLKKLI
EFMTSLKIPTPRRIYMNESAGTFQPSSPTINQNDSCPPSILEAIPQSERRDTYAFFARVLQLWRERLDTQGFDALGLQELCNGTQ