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PI0026041 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026041
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationtig00003626:605223..605741
RNA-Seq ExpressionPI0026041
SyntenyPI0026041
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045217.1 uncharacterized protein E6C27_scaffold30G002260 [Cucumis melo var. makuwa]2.6e-0639.53Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L ++ +   S
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAETNTGE-EERKTP--GALKFLSALQKK
          E    + EE   P  GALKFLS+LQKK
Subjt:  NAETNTGE-EERKTP--GALKFLSALQKK

KAA0047432.1 uncharacterized protein E6C27_scaffold498G00230 [Cucumis melo var. makuwa]3.4e-0637.98Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+ +    G+  R    +  + R        GPH   ECPN+ A  AFQA L ++++   S
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKK
          E     T E +    GALKFLS+LQKK
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKK

KAA0062340.1 polyprotein [Cucumis melo var. makuwa]2.0e-0638.93Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L +++E   +
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKKRE
          E     T E +    GALKFLS+LQKK E
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKKRE

TYK26634.1 polyprotein [Cucumis melo var. makuwa]2.0e-0638.93Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L +++E   +
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKKRE
          E     T E +    GALKFLS+LQKK E
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKKRE

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]5.4e-2052.63Show/hide
Query:  LISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRGGP------GPHRVYECPNRAALKAFQARLRTNAEAD
        L S T +  R+ QASSS  ++PARS SPK+GG ++ GGGDR+PF  RGG+  R P     N R GP      GPHRVYECPNRAAL+AFQA L  +   +
Subjt:  LISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRGGP------GPHRVYECPNRAALKAFQARLRTNAEAD

Query:  GSNAETNTGEE---ERKTPGALKFLSALQKKRE
            ET+T  E   +    GALKFLSALQKK E
Subjt:  GSNAETNTGEE---ERKTPGALKFLSALQKKRE

TrEMBL top hitse value%identityAlignment
A0A5A7TTJ4 Reverse transcriptase domain-containing protein1.3e-0639.53Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L ++ +   S
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAETNTGE-EERKTP--GALKFLSALQKK
          E    + EE   P  GALKFLS+LQKK
Subjt:  NAETNTGE-EERKTP--GALKFLSALQKK

A0A5A7TVD8 Reverse transcriptase domain-containing protein1.6e-0637.98Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+ +    G+  R    +  + R        GPH   ECPN+ A  AFQA L ++++   S
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKK
          E     T E +    GALKFLS+LQKK
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKK

A0A5A7V526 Polyprotein9.6e-0738.93Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L +++E   +
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKKRE
          E     T E +    GALKFLS+LQKK E
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKKRE

A0A5D3DSU8 Polyprotein9.6e-0738.93Show/hide
Query:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS
        +S   + TRR  +SSSG ++  R  SPK+ GG+R   GDR+      G+  R P  +  + R        GPH   ECPN+ A  AFQA L +++E   +
Subjt:  ISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRG-----GPGPHRVYECPNRAALKAFQARLRTNAEADGS

Query:  NAE---TNTGEEERKTPGALKFLSALQKKRE
          E     T E +    GALKFLS+LQKK E
Subjt:  NAE---TNTGEEERKTPGALKFLSALQKKRE

A0A6J1DLQ6 uncharacterized protein LOC1110223202.6e-2052.63Show/hide
Query:  LISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRGGP------GPHRVYECPNRAALKAFQARLRTNAEAD
        L S T +  R+ QASSS  ++PARS SPK+GG ++ GGGDR+PF  RGG+  R P     N R GP      GPHRVYECPNRAAL+AFQA L  +   +
Subjt:  LISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRGGP------GPHRVYECPNRAALKAFQARLRTNAEAD

Query:  GSNAETNTGEE---ERKTPGALKFLSALQKKRE
            ET+T  E   +    GALKFLSALQKK E
Subjt:  GSNAETNTGEE---ERKTPGALKFLSALQKKRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCAGCAGAAGGACTATTTGATCTCAGCAACGATGCGCCCCACGAGACGAAAGCAAGCTTCCTCTAGTGGAAGTAATAAACCCGCCAGATCTCACTCTCCCAAAAG
TGGAGGAGGAGAGAGAGCGGGAGGAGGGGATCGCAAACCCTTTCCCCCAAGAGGCGGACACCAAGGGCGCAACCCGAAGCAAGAGCAAGGCAATTATAGAGGAGGACCCG
GGCCCCATAGAGTTTACGAATGCCCAAATCGAGCTGCTCTCAAGGCATTCCAGGCAAGGTTAAGAACCAATGCCGAAGCTGATGGTTCAAATGCTGAGACGAATACAGGG
GAAGAAGAGAGGAAAACCCCCGGGGCCCTGAAGTTTTTGTCCGCCCTTCAGAAAAAGAGGGAAATAGAGGACAGGCGGAACGAGGTCTCATCTACATGCGTGGGTGAATC
AGAAAGAGGCCAAAAGCACGATGGTCGATTGCCACCCACAATTGAATTGCTGAGACAGAGGTCCGACGTCTCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCAGCAGAAGGACTATTTGATCTCAGCAACGATGCGCCCCACGAGACGAAAGCAAGCTTCCTCTAGTGGAAGTAATAAACCCGCCAGATCTCACTCTCCCAAAAG
TGGAGGAGGAGAGAGAGCGGGAGGAGGGGATCGCAAACCCTTTCCCCCAAGAGGCGGACACCAAGGGCGCAACCCGAAGCAAGAGCAAGGCAATTATAGAGGAGGACCCG
GGCCCCATAGAGTTTACGAATGCCCAAATCGAGCTGCTCTCAAGGCATTCCAGGCAAGGTTAAGAACCAATGCCGAAGCTGATGGTTCAAATGCTGAGACGAATACAGGG
GAAGAAGAGAGGAAAACCCCCGGGGCCCTGAAGTTTTTGTCCGCCCTTCAGAAAAAGAGGGAAATAGAGGACAGGCGGAACGAGGTCTCATCTACATGCGTGGGTGAATC
AGAAAGAGGCCAAAAGCACGATGGTCGATTGCCACCCACAATTGAATTGCTGAGACAGAGGTCCGACGTCTCAATCTGA
Protein sequenceShow/hide protein sequence
MPQQKDYLISATMRPTRRKQASSSGSNKPARSHSPKSGGGERAGGGDRKPFPPRGGHQGRNPKQEQGNYRGGPGPHRVYECPNRAALKAFQARLRTNAEADGSNAETNTG
EEERKTPGALKFLSALQKKREIEDRRNEVSSTCVGESERGQKHDGRLPPTIELLRQRSDVSI