CuGenDBv2

Gene ID	PI0026061
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	chr12:368882..371575
RNA-Seq Expression	PI0026061
Synteny	PI0026061
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KGN63981.2 hypothetical protein Csa_013804 [Cucumis sativus]

1.0e-52

94.02

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNH+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSV
        TVESAGL EEVDTQGSV
Subjt:  TVESAGLTEEVDTQGSV

XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]

9.8e-59

94.53

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNH+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGL EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]

1.0e-60

96.88

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+HHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGLTEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

4.4e-51

84.38

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N HSI S KKPMR++ LRLG +NSTNGI AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]

9.1e-57

90.62

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSS  SVLFGEMGKLKGRNHHSILSS KP+R +FLRL  NN TNGISAFFFNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGLTEE+DTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

4.7e-59

94.53

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLKGRNH+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP+ DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGL EEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

5.1e-61

96.88

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+HHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGLTEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

5.1e-61

96.88

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MAALLLHSSSTASVLFGEMGKLK R+HHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAGLTEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

2.1e-51

84.38

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTASVL G MGK +  N HSI S KKPMR++ LRLG +NSTNGI AF FNP+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

4.0e-50

82.81

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Query:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
        MA LLLHSSSTA VL G MGK +  N HSI S KKPMR++ LRLG NNSTN I AF F P+EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK
Subjt:  MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK

Query:  TVESAGLTEEVDTQGSVQEDGPTEIEIE
        TVESAG+TEEVDTQGSVQEDGPTEIEIE
Subjt:  TVESAGLTEEVDTQGSVQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

1.2e-06

40.3

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Query:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTE--EVDTQGSVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ P  I+I+
Subjt:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTE--EVDTQGSVQEDGPTEIEIE

Q8YQ06 UPF0426 protein asl4034

7.1e-04

32.31

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Query:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGPTEIEIE
        P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K       +  V    + +  GP  I I+
Subjt:  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGPTEIEIE

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

6.0e-19

63.51

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Query:  FNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+T EEVD  G V   ED P +IEIE
Subjt:  FNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGSV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

4.3e-20

63.51

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Query:  FNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGSV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+T EEVD  G V   ED P +IEIE
Subjt:  FNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGSV--QEDGPTEIEIE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGGCGGAATCATCATTCCATTTTGTCATCCAAGAAACCTAT
GCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAATCCAATTGAGGATCCTGTTATCAAAGAAGCTCTCAAGGAGCCAG
TGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAA
GTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

mRNA sequence

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ATTTGGGTACATCAAAAGGTAGGAAGATAGATGGCTCGAGAGAGTTATGGTACTGGAAATTATCCTTAAAAAAAAGGTACTGGAAAATTTTCGGACAAAAAGGTCGCTGG
GAAAATTGAGGTTTTTTTTTATTATATATATTTTTTTCGGTGGATGTGTCGAATTAAATCTAATGTAGAAAAAACACGATGGGCATGTGGTTGTTTTTCGAAATGTTTGG
TCAATTGTAAGAAGAAATGAAGGCGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCCATCCTTCAGTCAATCACAAGCAGCTCTGCTCCA
CTAGCATAATCAGAAATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGGCGGAATCATCATTCC
ATTTTGTCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAATCCAATTGAGGATCCTGTTAT
CAAAGAAGCTCTCAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGG
AATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCAATGGATTTAACCTGGTATAGAC
AACCTTATTTATTCCAATAATACAAACTGGAAAAGTGGGAATGAAATGATATTTGATTAGTATTACTACAGCTCCCTTGATTTCCCTTCTACCTTCTTTTTTTTTCCTTG
ATTTAGGAGGAAACACTTTATTGGTGTTTTGAATTAATTAGTTGTTCCAAGTTTAATTAATATATATATATATATATTTTTAT

Protein sequence

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MAALLLHSSSTASVLFGEMGKLKGRNHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPIEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE
VDTQGSVQEDGPTEIEIE

PI0026061 (gene) of Melon (PI 482460) v1 genome