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PI0026095 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026095
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr01:15915599..15915964
RNA-Seq ExpressionPI0026095
SyntenyPI0026095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033526.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-3979.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKGEIII+ NPLF+NSTP+S+LS+KES LEV SVMM DVTAEATMA+ME KINFLMK VEERDHEI ALKD MKA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESSQTPVVKA DK K  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
KAA0066644.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-3978.51Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQGSVL KKS EQL+ESPKG IIIK NPLF+NST +S+LS+KES LEV SVMMADVTAEATMAEME KIN+LMK +EERDHEI ALKD +KA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESS+TP VKA DKGK  LQEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
TYK04088.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-3978.51Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQGSVL KKS EQL+ESPKG IIIK NPLF+NST +S+LS+KES LEV SVMMADVTAEATMAEME KIN+LMK +EERDHEI ALKD +KA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESS+TP VKA DKGK  LQEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
TYK04575.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.6e-4079.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKG III+ NPLF+NSTP+S+LS+KES LEV SVMM DVTAEATMAEME KINFLMK VEERDHEI ALKD MKA ET 
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESSQTPVVKA DKGK  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
TYK16493.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-3979.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKG III+ NPLFDNSTP+S+LS+KES LEV SVMM DVTAEATMAEME KINFLMK VEERDHEI ALKD MKA ET 
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        E SQTPVVKA DKGK  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
TrEMBL top hitse value%identityAlignment
A0A5A7SU65 Ty3-gypsy retrotransposon protein6.1e-4079.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKGEIII+ NPLF+NSTP+S+LS+KES LEV SVMM DVTAEATMA+ME KINFLMK VEERDHEI ALKD MKA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESSQTPVVKA DK K  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
A0A5A7VH30 Ty3-gypsy retrotransposon protein7.9e-4078.51Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQGSVL KKS EQL+ESPKG IIIK NPLF+NST +S+LS+KES LEV SVMMADVTAEATMAEME KIN+LMK +EERDHEI ALKD +KA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESS+TP VKA DKGK  LQEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
A0A5D3BYI9 Ty3-gypsy retrotransposon protein7.9e-4078.51Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQGSVL KKS EQL+ESPKG IIIK NPLF+NST +S+LS+KES LEV SVMMADVTAEATMAEME KIN+LMK +EERDHEI ALKD +KA ETA
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESS+TP VKA DKGK  LQEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
A0A5D3BZH8 Ty3-gypsy retrotransposon protein4.6e-4079.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKG III+ NPLF+NSTP+S+LS+KES LEV SVMM DVTAEATMAEME KINFLMK VEERDHEI ALKD MKA ET 
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        ESSQTPVVKA DKGK  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
A0A5D3CX82 Ty3-gypsy retrotransposon protein6.1e-4079.34Show/hide
Query:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA
        M+EQEQG VL KKS EQL+ESPKG III+ NPLFDNSTP+S+LS+KES LEV SVMM DVTAEATMAEME KINFLMK VEERDHEI ALKD MKA ET 
Subjt:  MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETA

Query:  ESSQTPVVKAYDKGKATLQEN
        E SQTPVVKA DKGK  +QEN
Subjt:  ESSQTPVVKAYDKGKATLQEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAAGAACAAGGTTCCGTTCTCACAAAGAAAAGTTGGGAACAACTGATGGAATCTCCTAAAGGCGAGATCATCATCAAAGGGAATCCTTTGTTCGACAACTC
TACTCCTTCTTCTGATCTATCAGAGAAAGAATCTCAACTTGAAGTAGCGTCTGTCATGATGGCAGATGTAACAGCTGAGGCAACCATGGCAGAGATGGAAAGCAAAATAA
ATTTCCTAATGAAAGCTGTCGAGGAGCGAGATCATGAAATCGTTGCCTTGAAAGATCATATGAAGGCTCGTGAAACCGCTGAGTCGAGCCAAACTCCTGTTGTTAAAGCT
TATGATAAAGGAAAAGCTACGTTGCAGGAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAAGAACAAGGTTCCGTTCTCACAAAGAAAAGTTGGGAACAACTGATGGAATCTCCTAAAGGCGAGATCATCATCAAAGGGAATCCTTTGTTCGACAACTC
TACTCCTTCTTCTGATCTATCAGAGAAAGAATCTCAACTTGAAGTAGCGTCTGTCATGATGGCAGATGTAACAGCTGAGGCAACCATGGCAGAGATGGAAAGCAAAATAA
ATTTCCTAATGAAAGCTGTCGAGGAGCGAGATCATGAAATCGTTGCCTTGAAAGATCATATGAAGGCTCGTGAAACCGCTGAGTCGAGCCAAACTCCTGTTGTTAAAGCT
TATGATAAAGGAAAAGCTACGTTGCAGGAAAACTAA
Protein sequenceShow/hide protein sequence
MEEQEQGSVLTKKSWEQLMESPKGEIIIKGNPLFDNSTPSSDLSEKESQLEVASVMMADVTAEATMAEMESKINFLMKAVEERDHEIVALKDHMKARETAESSQTPVVKA
YDKGKATLQEN