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PI0026146 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026146
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:117664..118706
RNA-Seq ExpressionPI0026146
SyntenyPI0026146
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042086.1 reverse transcriptase [Cucumis melo var. makuwa]6.7e-7755.29Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEGYTFSLVVP+LANIYSGLRQIHD TSS GHS+ACFPLHY+HGWL LYFNTHYK PTSL   RM+EF  EGG  YYTNL A  HI+K K         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------
             ELLKDDG LI WNASFF+SIRSCFLSS+ GSSMVIE YSP  FSR+  FYQDV YDL++K+ + DFA                            
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------

Query:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE
                               GT+C+ DDSTP A+  L D+D  D +GK+  ILIT K P E+TEESQS+NGD HWKR K   KQ I+DEE
Subjt:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]2.7e-7853.59Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEG TFSL +P+LANIYSGLRQIHD TSS GHS+ACFP+HY+HGWLALYFNT+YK PTSL  PRMVEFS EGG KYYTNLEA THIH EK         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------
             ELL DDG LI+WNASFFISIR CFL S++GSS VIEPYSPCRF RQFGFYQDV YDL +KIPK + AN                           
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------

Query:  ----------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPI
                                          GTKCL   STP A+     +  A+ V K+  IL TGKRP  +TE+S SSN D HWKR K+  KQ I
Subjt:  ----------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPI

Query:  NDEESP
        +DE+ P
Subjt:  NDEESP

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]9.3e-7953.04Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEG TFSL +PVLANIYSGLRQIHD TSS GHS+ACFP+HY+HGWLALYFNT+YK PTSL  PRMVEFS EGG KYYTNLEA THIHKEK         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------
             ELL DDG LI+WNASFFISIR CFL S++GSS VIEPYSPCRF RQFGFYQDV YDL +KIPK + AN                           
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------

Query:  ------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQ
                                            GTKCL   STP A+     +  A+ V K+  IL TGKRP  +TE++ SSN D HWKR K+  KQ
Subjt:  ------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQ

Query:  PINDEESPNKIPD
         I+DE+ P ++ D
Subjt:  PINDEESPNKIPD

TYK18029.1 reverse transcriptase [Cucumis melo var. makuwa]6.7e-7755.29Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEGYTFSLVVP+LANIYSGLRQIHD TSS GHS+ACFPLHY+HGWL LYFNTHYK PTSL   RM+EF  EGG  YYTNL A  HI+K K         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------
             ELLKDDG LI WNASFF+SIRSCFLSS+ GSSMVIE YSP  FSR+  FYQDV YDL++K+ + DFA                            
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------

Query:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE
                               GT+C+ DDSTP A+  L D+D  D +GK+  ILIT K P E+TEESQS+NGD HWKR K   KQ I+DEE
Subjt:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.2e-7548.84Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEGYTFSL VPVLANIYSGLRQ+HD TSS G+S+ACFPLHY+HGWLALYFNTHYK P SL  PRMVEFS EGG KYYTNLEA THIHK K         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------
             ELL DDG+LI+WNASFFISIRSCFLSS+ GSS VIEPYSPCRFSRQFGFYQDV YDL ++IP+ +F N                           
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------

Query:  ---------------------------------------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPY
                                                                             GTK L D+ +   R   L K   D VGK+  
Subjt:  ---------------------------------------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPY

Query:  ILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEESPNKIPD
        + I  K P +  E+SQSSN DRHWKR KK  KQ I+DEESP ++PD
Subjt:  ILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEESPNKIPD

TrEMBL top hitse value%identityAlignment
A0A5A7TJC9 Reverse transcriptase3.2e-7755.29Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEGYTFSLVVP+LANIYSGLRQIHD TSS GHS+ACFPLHY+HGWL LYFNTHYK PTSL   RM+EF  EGG  YYTNL A  HI+K K         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------
             ELLKDDG LI WNASFF+SIRSCFLSS+ GSSMVIE YSP  FSR+  FYQDV YDL++K+ + DFA                            
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------

Query:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE
                               GT+C+ DDSTP A+  L D+D  D +GK+  ILIT K P E+TEESQS+NGD HWKR K   KQ I+DEE
Subjt:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE

A0A5A7U4C3 Uncharacterized protein1.4e-5141.27Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMYELLKDDG
        MAEGYTFSL +PVLANIYSGL QIHD TSS GHS+ CFP+HY+HGWLALYFNTHYK  TSL  P MVEFS EGG KYYTNLEA  HIHK           
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMYELLKDDG

Query:  KLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------------------
                                       +PCRF RQFGFYQDV YDL +KIPK + AN                                       
Subjt:  KLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------------------

Query:  ---------GTKCLADDSTP--------------PARSILLDK--------------DSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAK
                 G + L D  TP              P + I   K                AD + K+   L T KRP  +TE+S SSN DRHWKR K+  K
Subjt:  ---------GTKCLADDSTP--------------PARSILLDK--------------DSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAK

Query:  QPINDEESPNKIPDI
        Q I+DE+ P ++PD+
Subjt:  QPINDEESPNKIPDI

A0A5A7V0Y4 Uncharacterized protein1.3e-7853.59Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEG TFSL +P+LANIYSGLRQIHD TSS GHS+ACFP+HY+HGWLALYFNT+YK PTSL  PRMVEFS EGG KYYTNLEA THIH EK         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------
             ELL DDG LI+WNASFFISIR CFL S++GSS VIEPYSPCRF RQFGFYQDV YDL +KIPK + AN                           
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------

Query:  ----------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPI
                                          GTKCL   STP A+     +  A+ V K+  IL TGKRP  +TE+S SSN D HWKR K+  KQ I
Subjt:  ----------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPI

Query:  NDEESP
        +DE+ P
Subjt:  NDEESP

A0A5D3C9B7 Uncharacterized protein4.5e-7953.04Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEG TFSL +PVLANIYSGLRQIHD TSS GHS+ACFP+HY+HGWLALYFNT+YK PTSL  PRMVEFS EGG KYYTNLEA THIHKEK         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------
             ELL DDG LI+WNASFFISIR CFL S++GSS VIEPYSPCRF RQFGFYQDV YDL +KIPK + AN                           
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFAN---------------------------

Query:  ------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQ
                                            GTKCL   STP A+     +  A+ V K+  IL TGKRP  +TE++ SSN D HWKR K+  KQ
Subjt:  ------------------------------------GTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQ

Query:  PINDEESPNKIPD
         I+DE+ P ++ D
Subjt:  PINDEESPNKIPD

A0A5D3D3U4 Reverse transcriptase3.2e-7755.29Show/hide
Query:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------
        MAEGYTFSLVVP+LANIYSGLRQIHD TSS GHS+ACFPLHY+HGWL LYFNTHYK PTSL   RM+EF  EGG  YYTNL A  HI+K K         
Subjt:  MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMY-------

Query:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------
             ELLKDDG LI WNASFF+SIRSCFLSS+ GSSMVIE YSP  FSR+  FYQDV YDL++K+ + DFA                            
Subjt:  -----ELLKDDGKLINWNASFFISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFA----------------------------

Query:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE
                               GT+C+ DDSTP A+  L D+D  D +GK+  ILIT K P E+TEESQS+NGD HWKR K   KQ I+DEE
Subjt:  ----------------------NGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSKKSAKQPINDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGGCTACACCTTTAGCCTTGTTGTCCCTGTTCTAGCCAATATTTATAGCGGCTTACGCCAGATTCATGACTTTACTTCGTCTTTTGGCCATTCAAGCGCATG
TTTTCCCCTACACTATATACATGGATGGCTTGCTCTTTACTTCAACACTCATTACAAGGTCCCTACGAGTCTTAGTGATCCACGCATGGTTGAGTTTTCCAGTGAAGGTG
GGACTAAATACTATACTAATCTTGAGGCTCATACACATATTCACAAGGAAAAAATGTACGAACTCCTAAAAGATGATGGAAAGTTAATTAATTGGAATGCTTCATTTTTT
ATAAGCATTCGATCTTGTTTTCTGTCCTCACGATGGGGATCCTCCATGGTTATTGAACCTTACAGTCCTTGTCGTTTTAGTCGGCAATTTGGGTTTTATCAAGACGTGCT
ATATGACTTAGATCAAAAAATTCCCAAAGTTGATTTCGCCAACGGTACAAAATGCTTGGCAGATGATTCGACTCCTCCTGCACGATCTATACTCCTTGACAAAGATAGTG
CTGATAAAGTGGGTAAAGAGCCCTACATATTAATAACCGGCAAGCGCCCTTTTGAGTATACTGAAGAGAGTCAAAGCAGCAATGGTGATCGTCATTGGAAGAGATCCAAG
AAGTCCGCCAAACAACCGATCAATGATGAAGAGTCTCCTAATAAAATACCTGACATCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGGCTACACCTTTAGCCTTGTTGTCCCTGTTCTAGCCAATATTTATAGCGGCTTACGCCAGATTCATGACTTTACTTCGTCTTTTGGCCATTCAAGCGCATG
TTTTCCCCTACACTATATACATGGATGGCTTGCTCTTTACTTCAACACTCATTACAAGGTCCCTACGAGTCTTAGTGATCCACGCATGGTTGAGTTTTCCAGTGAAGGTG
GGACTAAATACTATACTAATCTTGAGGCTCATACACATATTCACAAGGAAAAAATGTACGAACTCCTAAAAGATGATGGAAAGTTAATTAATTGGAATGCTTCATTTTTT
ATAAGCATTCGATCTTGTTTTCTGTCCTCACGATGGGGATCCTCCATGGTTATTGAACCTTACAGTCCTTGTCGTTTTAGTCGGCAATTTGGGTTTTATCAAGACGTGCT
ATATGACTTAGATCAAAAAATTCCCAAAGTTGATTTCGCCAACGGTACAAAATGCTTGGCAGATGATTCGACTCCTCCTGCACGATCTATACTCCTTGACAAAGATAGTG
CTGATAAAGTGGGTAAAGAGCCCTACATATTAATAACCGGCAAGCGCCCTTTTGAGTATACTGAAGAGAGTCAAAGCAGCAATGGTGATCGTCATTGGAAGAGATCCAAG
AAGTCCGCCAAACAACCGATCAATGATGAAGAGTCTCCTAATAAAATACCTGACATCACATAG
Protein sequenceShow/hide protein sequence
MAEGYTFSLVVPVLANIYSGLRQIHDFTSSFGHSSACFPLHYIHGWLALYFNTHYKVPTSLSDPRMVEFSSEGGTKYYTNLEAHTHIHKEKMYELLKDDGKLINWNASFF
ISIRSCFLSSRWGSSMVIEPYSPCRFSRQFGFYQDVLYDLDQKIPKVDFANGTKCLADDSTPPARSILLDKDSADKVGKEPYILITGKRPFEYTEESQSSNGDRHWKRSK
KSAKQPINDEESPNKIPDIT