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PI0026163 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026163
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:19968375..19969156
RNA-Seq ExpressionPI0026163
SyntenyPI0026163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.6e-2668.89Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWL
        +A D D PIR Y +PNLY+FN  IAYP F+EN RFEIK VMLQ+IQNAGQF  H R+DPH+YIR+FYSIC SFHM GIS +ELRF  F L
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.6e-3438.6Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA
        +AHD + P+R Y +PNLYNF   I  P F  N RFE+K VMLQM+Q AGQFGG   EDPH +++SF  IC++F M+G+    +R  LF  +LRDEA++WA
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA

Query:  NALEDGE----------------------------------DGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN
         + E GE                                  D E+               PHNGIP C+ ME+FY GLNK +Q   D    GG++   Y 
Subjt:  NALEDGE----------------------------------DGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN

Query:  QIKATLDIMASNNEE
        Q K  LD ++ N  +
Subjt:  QIKATLDIMASNNEE

XP_038880527.1 uncharacterized protein LOC120072192 [Benincasa hispida]3.3e-2732.18Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA
        MA++   P+R Y +P LY+F+  I YP+  +  RFE+KSVMLQM+Q A QFGG   EDPH +++ F   C  F +  I+P+++R +LF  +LRD+AK+W 
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA

Query:  NALE----------------------------------DGEDGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN
        ++LE                                  + ED E++              P++ +   I ME FY GLN+A+Q   D     G++   Y 
Subjt:  NALE----------------------------------DGEDGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN

Query:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSD--EGMDKNIVVALQEQMTAMNNLLKSMAI
        + K  L  +A +N EW +D +D R   R RS     +D N +  L  Q+  M +LL+++ +
Subjt:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSD--EGMDKNIVVALQEQMTAMNNLLKSMAI

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]8.1e-3436.02Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA
        +A D +IPIR Y APNLY+F+  I+ P+  ENARFEIK VM+QMIQN  QF     E+PH ++  F  +C++F + GI+P  +R  LF  TLRD+AKRWA
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA

Query:  NALEDGE----------------------------------DGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN
        ++LE  E                                  D E++              PH GI +C+LME+FY GLN++TQ   D   V   +   Y 
Subjt:  NALEDGE----------------------------------DGESM--------------PHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN

Query:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG-MDKNIVVALQEQMTAMNNLLKSMAIS
        + K  LD ++ N ++W +D +  R   R R+D   +  N +  L  QM  + +LL+ MA++
Subjt:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG-MDKNIVVALQEQMTAMNNLLKSMAIS

XP_038896595.1 uncharacterized protein LOC120084850 [Benincasa hispida]7.3e-3540.74Show/hide
Query:  IRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWANALEDGED
        +R Y APN YNF   I+ P   ENA F+I+S+MLQMIQNAG+FGG   EDPH ++  F  IC +F +  +SP+ +R  +F  TLRDEA+RWA +LE  E 
Subjt:  IRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWANALEDGED

Query:  G-----------ESMPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYNQIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG--MDKNIVVAL
                    ++  H GIP C+LME  Y GL+++ Q   D     G++   Y + K  LD ++ N +EW  + ++  RG   R  EG  +  + +  L
Subjt:  G-----------ESMPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYNQIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG--MDKNIVVAL

Query:  QEQMTAMNNLLKSMAI
         +QMT M  LL++MAI
Subjt:  QEQMTAMNNLLKSMAI

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein2.5e-2560.19Show/hide
Query:  ESMPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYNQIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEGMDKNIVVALQEQMTAMNNLLKSM
        ++ P +GIPEC+ MEVFYFGL+K T Q  + +FVGGML+S YNQIKATLD M++N++EWD+  F +R   RGR+ EG+DK++VV LQ QM AMNNLL+SM
Subjt:  ESMPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYNQIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEGMDKNIVVALQEQMTAMNNLLKSM

Query:  AIS
         +S
Subjt:  AIS

A0A5A7TNS8 Uncharacterized protein3.9e-2640.48Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA
        +AH+L+ PI  Y +P+LY FNL I YP F  NARF++K  ML MIQ   QFGG+L EDP ++I+S Y +C+SFH+  +S ++L    F  TL+D+ K+W 
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA

Query:  NALEDGEDGESMPHNGIPECILMEVFYFGLNKATQQTTDVVF--VGGMLKSRYNQIKATLDIMASNNE
          LE                         + +ATQ   D +F   G +++  Y QIK TLDIM+ N+E
Subjt:  NALEDGEDGESMPHNGIPECILMEVFYFGLNKATQQTTDVVF--VGGMLKSRYNQIKATLDIMASNNE

A0A5A7V2U7 Putative disease resistance RPP13-like protein 17.9e-2768.89Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWL
        +A D D PIR Y +PNLY+FN  IAYP F+EN RFEIK VMLQ+IQNAGQF  H R+DPH+YIR+FYSIC SFHM GIS +ELRF  F L
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.4e-2369.62Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGIS
        +AH+LD+PIR Y + NLY+FNL IAY VF ENA FE+K VMLQMIQ AGQF G+  EDPHE+I+SFYSIC SFHMS  S
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGIS

U5CUI2 Retrotrans_gag domain-containing protein1.9e-2532.69Show/hide
Query:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA
        +A D    IR Y AP     N  I  P   +  +FE+K VM QM+Q  GQF G   EDPH ++RSF  +  SF + G+S + LR  LF  +LRD A+ W 
Subjt:  MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWA

Query:  NA--------------------------------------LEDGEDGES----------MPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN
        N                                       LED    ++           PH+GIP CI ME FY GLN A++   D    G +L   YN
Subjt:  NA--------------------------------------LEDGEDGES----------MPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYN

Query:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG-MDKNIVVALQEQMTAMNNLLKSMAI
        +    L+ +ASNN +W      N R    R   G ++ + + AL  QM +M N+LK+++I
Subjt:  QIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEG-MDKNIVVALQEQMTAMNNLLKSMAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATGACTTAGACATACCGATTAGGTTGTATGTTGCACCAAACCTTTACAACTTCAACCTAAGCATCGCCTACCCTGTGTTCAACGAGAATGCAAGATTTGAGAT
CAAGTCTGTCATGCTGCAGATGATCCAGAACGCCGGACAGTTTGGTGGTCACCTTAGGGAAGATCCACATGAATACATTAGAAGTTTCTATTCCATTTGCACTTCCTTCC
ATATGTCTGGCATATCGCCTAAAGAGTTGCGATTTGCCCTCTTCTGGTTAACTCTAAGGGACGAGGCGAAGAGATGGGCGAATGCTTTGGAAGATGGAGAGGATGGTGAA
AGCATGCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTACTTTGGTCTGAATAAGGCAACACAACAGACTACTGATGTTGTGTTTGTAGGCGGTATGTT
GAAAAGCAGATACAACCAGATAAAGGCGACGCTGGATATAATGGCCAGCAACAATGAAGAATGGGATGAAGACGATTTCGACAATCGACGAGGGGGACGAGGAAGAAGCG
ATGAAGGAATGGATAAGAATATCGTGGTGGCGTTGCAAGAACAAATGACTGCAATGAACAACCTGTTAAAATCAATGGCAATCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCATGACTTAGACATACCGATTAGGTTGTATGTTGCACCAAACCTTTACAACTTCAACCTAAGCATCGCCTACCCTGTGTTCAACGAGAATGCAAGATTTGAGAT
CAAGTCTGTCATGCTGCAGATGATCCAGAACGCCGGACAGTTTGGTGGTCACCTTAGGGAAGATCCACATGAATACATTAGAAGTTTCTATTCCATTTGCACTTCCTTCC
ATATGTCTGGCATATCGCCTAAAGAGTTGCGATTTGCCCTCTTCTGGTTAACTCTAAGGGACGAGGCGAAGAGATGGGCGAATGCTTTGGAAGATGGAGAGGATGGTGAA
AGCATGCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTACTTTGGTCTGAATAAGGCAACACAACAGACTACTGATGTTGTGTTTGTAGGCGGTATGTT
GAAAAGCAGATACAACCAGATAAAGGCGACGCTGGATATAATGGCCAGCAACAATGAAGAATGGGATGAAGACGATTTCGACAATCGACGAGGGGGACGAGGAAGAAGCG
ATGAAGGAATGGATAAGAATATCGTGGTGGCGTTGCAAGAACAAATGACTGCAATGAACAACCTGTTAAAATCAATGGCAATCTCGTAG
Protein sequenceShow/hide protein sequence
MAHDLDIPIRLYVAPNLYNFNLSIAYPVFNENARFEIKSVMLQMIQNAGQFGGHLREDPHEYIRSFYSICTSFHMSGISPKELRFALFWLTLRDEAKRWANALEDGEDGE
SMPHNGIPECILMEVFYFGLNKATQQTTDVVFVGGMLKSRYNQIKATLDIMASNNEEWDEDDFDNRRGGRGRSDEGMDKNIVVALQEQMTAMNNLLKSMAIS