; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026167 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026167
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr12:15294890..15295889
RNA-Seq ExpressionPI0026167
SyntenyPI0026167
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]2.6e-5756.4Show/hide
Query:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI
        MPSY KFL DI AKKRR+ND + +AL QATSD++KNGV EKMT PGSF VPCSI GMDLG  LC+LGASINLMPL +FKKL I EVQPT MR Q ADRSI
Subjt:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI

Query:  AMPEGKNEDVLVKEEEVSKLLSHEEFF-------EENLYIIE----------------EVNVVSSERKSE---------PLDLPTKGEKRIKPSIEEPPE
          P+GK EDVLVK   V K L   +F        EE L I+                 E+ V  + ++ +         PLD   + EK  KPS+ EP E
Subjt:  AMPEGKNEDVLVKEEEVSKLLSHEEFF-------EENLYIIE----------------EVNVVSSERKSE---------PLDLPTKGEKRIKPSIEEPPE

Query:  LELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH--PIAW
        LELKPLPNHLKY YLGENDTL  IIS HLN  EE+ LLN LK H   I W
Subjt:  LELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH--PIAW

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]8.9e-5864.85Show/hide
Query:  ATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDV----------------LV
        ATSD+FKNG+PEKMT+P SFTVPCSIG MDLGR LCNL  SINLM L +FKKL I EVQPT +RL FAD+ IA PE K +D                   
Subjt:  ATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDV----------------LV

Query:  KEEEVSKLLSHEEFFEEN--LYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLK
        ++E   +L S EEFFEE+   YI++EVNVVSSE+K E LDL  KGEK+ KPSIEEPPELELK LPNHLKY YL ENDTL V ISTHL+VA+EK LLNMLK
Subjt:  KEEEVSKLLSHEEFFEEN--LYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLK

Query:  LH
         H
Subjt:  LH

TYJ96947.1 integrase [Cucumis melo var. makuwa]4.1e-5562.86Show/hide
Query:  MTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDVLVKEEEVSKLLSHEEFFEEN--LYIIEEVNV
        MTD GSF V CSIG M LGR+LC+LGASINLMPL +FKK  IGEVQPT MRLQFADRSIA    K +D +  EE   +L + E+F EE+   YI+EEVNV
Subjt:  MTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDVLVKEEEVSKLLSHEEFFEEN--LYIIEEVNV

Query:  VSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH----------------PIAWIKSGWKR
        VS E+K E LDL TKGEK+ K SIEEPPELELKP  NHLKYAYLG NDTL++IISTHL+  EEK LLN+LKLH                 IA IK G KR
Subjt:  VSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH----------------PIAWIKSGWKR

Query:  VKRASFNFRG
        VKRA F+ +G
Subjt:  VKRASFNFRG

TYJ99425.1 uncharacterized protein E5676_scaffold316G00120 [Cucumis melo var. makuwa]1.5e-6063.64Show/hide
Query:  VKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPE
        VKFLKDI  KKR++ND + VALTQAT+++FKNGVP+KMTDPGSFT+P SIG +DLGR LC L A++NL+PL +FKKL IGEVQPT MRLQ  D       
Subjt:  VKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPE

Query:  GKNEDVLVKEEEVSKLLSHEEFFEENL--YIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEE
               + EE   +L S EEF EE+   Y +EEVN    +RK EPLDL TK EK+IKPSI+EP ELELKPLPNHLKYAYLGENDTL +IIS HL+ A+E
Subjt:  GKNEDVLVKEEEVSKLLSHEEFFEENL--YIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEE

Query:  KTLLNMLKL
          LL MLKL
Subjt:  KTLLNMLKL

XP_030483376.1 uncharacterized protein LOC115699972 [Cannabis sativa]2.3e-5350Show/hide
Query:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI
        MP+YVKFLKDI  KKRR+ + E VALT+  S + K+ +P K+ DPGSFT+PCSIGG D+GR LC+LGASINLMP+ +FKKLGIGE +PT + LQ ADRS+
Subjt:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI

Query:  AMPEGKNEDVLV--------KEEEVSKLLS------HEEFFEENLYI-------------------IEEVNVVSSERKS-EPLDLPTKGEKRIKPSIEEP
        A PEGK EDVLV        K   +S + S      H+E + +  +I                   +E +  + + +K  E L+L     K  KPSI+EP
Subjt:  AMPEGKNEDVLV--------KEEEVSKLLS------HEEFFEENLYI-------------------IEEVNVVSSERKS-EPLDLPTKGEKRIKPSIEEP

Query:  PELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLHPIAWIKSG
        P+LELKPLP+HLKYAYLGENDTL VII+++L V  E  LL +LK H  A +  G
Subjt:  PELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLHPIAWIKSG

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein4.3e-5864.85Show/hide
Query:  ATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDV----------------LV
        ATSD+FKNG+PEKMT+P SFTVPCSIG MDLGR LCNL  SINLM L +FKKL I EVQPT +RL FAD+ IA PE K +D                   
Subjt:  ATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDV----------------LV

Query:  KEEEVSKLLSHEEFFEEN--LYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLK
        ++E   +L S EEFFEE+   YI++EVNVVSSE+K E LDL  KGEK+ KPSIEEPPELELK LPNHLKY YL ENDTL V ISTHL+VA+EK LLNMLK
Subjt:  KEEEVSKLLSHEEFFEEN--LYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLK

Query:  LH
         H
Subjt:  LH

A0A5A7UFR7 Uncharacterized protein1.2e-4452.48Show/hide
Query:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI
        M SYVKFLKDI  KK+RMND E VALT+ TSD+FKNGV +K+ +PGSF VPC IGG+DLG  L +LGA I LM L +FKKL I +VQPT MRL+F +RS+
Subjt:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI

Query:  AMPEGKNEDVLVKEEEVSKLLSHEEFFEENLYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVA
        A P  K +D+L+                                         KG+++ K SIEE P+LELK LPNHLKYAYLGENDTL V+IS  L+ A
Subjt:  AMPEGKNEDVLVKEEEVSKLLSHEEFFEENLYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVA

Query:  EE
        EE
Subjt:  EE

A0A5D3BCU9 Integrase2.0e-5562.86Show/hide
Query:  MTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDVLVKEEEVSKLLSHEEFFEEN--LYIIEEVNV
        MTD GSF V CSIG M LGR+LC+LGASINLMPL +FKK  IGEVQPT MRLQFADRSIA    K +D +  EE   +L + E+F EE+   YI+EEVNV
Subjt:  MTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDVLVKEEEVSKLLSHEEFFEEN--LYIIEEVNV

Query:  VSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH----------------PIAWIKSGWKR
        VS E+K E LDL TKGEK+ K SIEEPPELELKP  NHLKYAYLG NDTL++IISTHL+  EEK LLN+LKLH                 IA IK G KR
Subjt:  VSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH----------------PIAWIKSGWKR

Query:  VKRASFNFRG
        VKRA F+ +G
Subjt:  VKRASFNFRG

A0A5D3BDT2 RT_RNaseH domain-containing protein1.2e-5756.4Show/hide
Query:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI
        MPSY KFL DI AKKRR+ND + +AL QATSD++KNGV EKMT PGSF VPCSI GMDLG  LC+LGASINLMPL +FKKL I EVQPT MR Q ADRSI
Subjt:  MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSI

Query:  AMPEGKNEDVLVKEEEVSKLLSHEEFF-------EENLYIIE----------------EVNVVSSERKSE---------PLDLPTKGEKRIKPSIEEPPE
          P+GK EDVLVK   V K L   +F        EE L I+                 E+ V  + ++ +         PLD   + EK  KPS+ EP E
Subjt:  AMPEGKNEDVLVKEEEVSKLLSHEEFF-------EENLYIIE----------------EVNVVSSERKSE---------PLDLPTKGEKRIKPSIEEPPE

Query:  LELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH--PIAW
        LELKPLPNHLKY YLGENDTL  IIS HLN  EE+ LLN LK H   I W
Subjt:  LELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLH--PIAW

A0A5D3BM69 Uncharacterized protein7.1e-6163.64Show/hide
Query:  VKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPE
        VKFLKDI  KKR++ND + VALTQAT+++FKNGVP+KMTDPGSFT+P SIG +DLGR LC L A++NL+PL +FKKL IGEVQPT MRLQ  D       
Subjt:  VKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPE

Query:  GKNEDVLVKEEEVSKLLSHEEFFEENL--YIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEE
               + EE   +L S EEF EE+   Y +EEVN    +RK EPLDL TK EK+IKPSI+EP ELELKPLPNHLKYAYLGENDTL +IIS HL+ A+E
Subjt:  GKNEDVLVKEEEVSKLLSHEEFFEENL--YIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEE

Query:  KTLLNMLKL
          LL MLKL
Subjt:  KTLLNMLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCTATGTCAAGTTCCTAAAAGACATCTTTGCAAAGAAAAGAAGGATGAATGATTGCGAGATAGTGGCTTTAACCCAGGCAACAAGCGACGTCTTTAAAAATGG
AGTACCCGAGAAGATGACAGATCCTGGTAGCTTCACGGTGCCTTGCTCAATAGGCGGAATGGATCTAGGTCGCACCCTATGCAATTTAGGAGCCAGCATTAATTTGATGC
CTCTTTTTGTCTTCAAGAAATTAGGGATAGGGGAGGTGCAACCAACATTCATGAGGCTCCAATTTGCTGATAGATCCATTGCAATGCCTGAAGGAAAAAATGAAGATGTT
TTGGTGAAGGAAGAAGAAGTTTCTAAGCTGCTTAGCCATGAAGAATTCTTTGAAGAAAATCTCTATATAATAGAGGAAGTAAACGTCGTGTCTAGCGAAAGAAAGTCAGA
GCCTTTGGATCTGCCAACCAAAGGCGAGAAGAGGATTAAGCCATCAATAGAAGAACCACCAGAATTAGAGCTAAAGCCTTTACCAAACCACCTGAAATATGCATATTTGG
GGGAGAATGACACCTTGACCGTTATAATCTCCACCCATTTGAATGTCGCAGAAGAAAAGACGTTGTTGAATATGCTTAAACTTCATCCTATTGCATGGATAAAATCAGGT
TGGAAGAGGGTCAAGAGGGCATCATTCAATTTCAGAGGCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCCTATGTCAAGTTCCTAAAAGACATCTTTGCAAAGAAAAGAAGGATGAATGATTGCGAGATAGTGGCTTTAACCCAGGCAACAAGCGACGTCTTTAAAAATGG
AGTACCCGAGAAGATGACAGATCCTGGTAGCTTCACGGTGCCTTGCTCAATAGGCGGAATGGATCTAGGTCGCACCCTATGCAATTTAGGAGCCAGCATTAATTTGATGC
CTCTTTTTGTCTTCAAGAAATTAGGGATAGGGGAGGTGCAACCAACATTCATGAGGCTCCAATTTGCTGATAGATCCATTGCAATGCCTGAAGGAAAAAATGAAGATGTT
TTGGTGAAGGAAGAAGAAGTTTCTAAGCTGCTTAGCCATGAAGAATTCTTTGAAGAAAATCTCTATATAATAGAGGAAGTAAACGTCGTGTCTAGCGAAAGAAAGTCAGA
GCCTTTGGATCTGCCAACCAAAGGCGAGAAGAGGATTAAGCCATCAATAGAAGAACCACCAGAATTAGAGCTAAAGCCTTTACCAAACCACCTGAAATATGCATATTTGG
GGGAGAATGACACCTTGACCGTTATAATCTCCACCCATTTGAATGTCGCAGAAGAAAAGACGTTGTTGAATATGCTTAAACTTCATCCTATTGCATGGATAAAATCAGGT
TGGAAGAGGGTCAAGAGGGCATCATTCAATTTCAGAGGCGATTAA
Protein sequenceShow/hide protein sequence
MPSYVKFLKDIFAKKRRMNDCEIVALTQATSDVFKNGVPEKMTDPGSFTVPCSIGGMDLGRTLCNLGASINLMPLFVFKKLGIGEVQPTFMRLQFADRSIAMPEGKNEDV
LVKEEEVSKLLSHEEFFEENLYIIEEVNVVSSERKSEPLDLPTKGEKRIKPSIEEPPELELKPLPNHLKYAYLGENDTLTVIISTHLNVAEEKTLLNMLKLHPIAWIKSG
WKRVKRASFNFRGD