; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026173 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026173
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionzinc finger protein JAGGED
Genome locationchr09:14868673..14870365
RNA-Seq ExpressionPI0026173
SyntenyPI0026173
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0007275 - multicellular organism development (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR031113 - Zinc finger protein JAGGED-like
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047421.1 zinc finger protein JAGGED [Cucumis melo var. makuwa]1.2e-10397.44Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PHLGCCHSMAPANYHTAGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

KGN51212.2 hypothetical protein Csa_008797 [Cucumis sativus]3.5e-10396.92Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PHLGCCHSMAPANYH+AGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

XP_008465782.1 PREDICTED: zinc finger protein JAGGED [Cucumis melo]2.0e-10697.96Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
        MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
Subjt:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PPHLGCCHSMAPANYHTAGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

XP_011655169.1 zinc finger protein JAGGED [Cucumis sativus]7.1e-10496.94Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
        MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PP
Subjt:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PPHLGCCHSMAPANYH+AGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

XP_038876123.1 zinc finger protein JAGGED-like [Benincasa hispida]2.1e-10395.43Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
        MRSEGSPLDLNNLPEDYIRDGKQIIED+S+GHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
Subjt:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTAGGSG-GVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PPHLGCCHSMAPANYHTAGG G GVGSDSTLPLRFPTRMFSGSSPS+LLPQPPPPPLP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PPHLGCCHSMAPANYHTAGGSG-GVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

TrEMBL top hitse value%identityAlignment
A0A0A0KTC2 C2H2-type domain-containing protein1.7e-10396.92Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PHLGCCHSMAPANYH+AGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

A0A1S3CQ11 zinc finger protein JAGGED9.7e-10797.96Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
        MRSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
Subjt:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PPHLGCCHSMAPANYHTAGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

A0A5A7U1F5 Zinc finger protein JAGGED5.9e-10497.44Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PHLGCCHSMAPANYHTAGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

A0A5D3BYD4 Zinc finger protein JAGGED1.3e-9592.82Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDLNNLPEDYIRDGKQIIED+SSGHRKKKSGLKEGKEE GKVYECRFCSLKFCKSQAL         ERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PHLGCCHSMAPANYHTAGGSG VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

A0A6J1I6U1 zinc finger protein JAGGED-like1.4e-8987.31Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP
        MRS+GSPLDLNNLPEDYIRD KQIIED S+GHRKKKSG KEG EE GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLA Q  P
Subjt:  MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLL-PQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN
        PPHLGCCHSMAP +YHTA GSGGVGSD TL LRFPTRMF GSSP+TLL P P PPP P  HQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGN
Subjt:  PPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLL-PQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGN

SwissProt top hitse value%identityAlignment
Q39265 Zinc finger protein 66.0e-0529.52Show/hide
Query:  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSN---------------------DNLAAQPP
        G  ++E  S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + L RA+ L                          +L +QP 
Subjt:  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSN---------------------DNLAAQPP

Query:  PPPHL
        PPPH+
Subjt:  PPPHL

Q6S591 Zinc finger protein JAGGED1.2e-3752.75Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPP
        MR E + LDLNNLP+D+ +DG KQ +E+ SS  ++KK G KEGK+E GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN+ARQLV+ ND +   PP
Subjt:  MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPP

Query:  PPPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
             G  H+  P  Y +   S         P+ +P     GSS + L+PQPP PP P  + PY  N  +  + F  YY  P
Subjt:  PPPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP

Q6S592 Zinc finger protein JAGGED-like7.6e-2444.83Show/hide
Query:  EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH
        E + LDLNNLP+D  RD     E+  S       G +E + + GK YECRFCSLKF KSQALGGHMNRHRQERETE+LN+AR+LV  ND+       PPH
Subjt:  EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH

Query:  LGCCHSMAPANYHTAGGSGGVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR
         G      P ++    G   +G  +   P+ +P R FS    S++L   PP   PPL S    H   + N+ TR
Subjt:  LGCCHSMAPANYHTAGGSGGVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR

Q9FKA9 Protein LATE FLOWERING2.3e-0446.15Show/hide
Query:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNLAAQP
        +++ C FCS KF  SQALGGH N H++ER       RA   V +ND L   P
Subjt:  KVYECRFCSLKFCKSQALGGHMNRHRQER-ETETLNRARQLVFSNDNLAAQP

Q9LG97 Zinc finger protein STAMENLESS 12.3e-3647.71Show/hide
Query:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSS-------GHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNL
        R EGSPLDLNNLP+++   GKQ +E +++         R  K     GK+E GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVF ND+L
Subjt:  RSEGSPLDLNNLPEDYIRDGKQIIEDNSS-------GHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNL

Query:  AAQPPP----PPHLGCCHSMAPANYHTAGG----SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPS-----SFPSYYPPP
        AA          ++G   + AP      GG     GGVG D  +PLR P +      P    PQPPP      +  YLY +   PS     S+P+ YP P
Subjt:  AAQPPP----PPHLGCCHSMAPANYHTAGG----SGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPS-----SFPSYYPPP

Query:  -----QASINDYYVGHVL
              A++ DY +GH +
Subjt:  -----QASINDYYVGHVL

Arabidopsis top hitse value%identityAlignment
AT1G13400.1 C2H2 and C2HC zinc fingers superfamily protein5.4e-2544.83Show/hide
Query:  EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH
        E + LDLNNLP+D  RD     E+  S       G +E + + GK YECRFCSLKF KSQALGGHMNRHRQERETE+LN+AR+LV  ND+       PPH
Subjt:  EGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH

Query:  LGCCHSMAPANYHTAGGSGGVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR
         G      P ++    G   +G  +   P+ +P R FS    S++L   PP   PPL S    H   + N+ TR
Subjt:  LGCCHSMAPANYHTAGGSGGVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPP---PPLPS---SHQPYLYNSPTR

AT1G67030.1 zinc finger protein 64.3e-0629.52Show/hide
Query:  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSN---------------------DNLAAQPP
        G  ++E  S  ++  +     G     + YEC++C  +F  SQALGGH N H++ER  + L RA+ L                          +L +QP 
Subjt:  GKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSN---------------------DNLAAQPP

Query:  PPPHL
        PPPH+
Subjt:  PPPHL

AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein8.6e-3952.75Show/hide
Query:  MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPP
        MR E + LDLNNLP+D+ +DG KQ +E+ SS  ++KK G KEGK+E GKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN+ARQLV+ ND +   PP
Subjt:  MRSEGSPLDLNNLPEDYIRDG-KQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPP

Query:  PPPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP
             G  H+  P  Y +   S         P+ +P     GSS + L+PQPP PP P  + PY  N  +  + F  YY  P
Subjt:  PPPHLGCCHSMAPANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPP

AT5G05120.1 C2H2 and C2HC zinc fingers superfamily protein1.9e-0655.56Show/hide
Query:  VYECRFCSLKFCKSQALGGHMNRHRQERETETLNRA
        +Y+C++C  KF K+QALGGH N HR+ERE E   +A
Subjt:  VYECRFCSLKFCKSQALGGHMNRHRQERETETLNRA

AT5G27880.1 C2H2 and C2HC zinc fingers superfamily protein9.6e-0630Show/hide
Query:  SSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH--LGCCHSMAPANYHTAG-------
        SS  R+ +  +K    +  K+Y C FC   F  SQALGGH N H+QERE +   +  +  +   +        PH  LG     A +N +  G       
Subjt:  SSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPH--LGCCHSMAPANYHTAG-------

Query:  ----GSGGVGSD-STLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQAS
             S   G + + +P   PTR F+G++ +       P PLPS +  Y  NS    +  P  +PPPQ +
Subjt:  ----GSGGVGSD-STLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATCCGAGGGGAGTCCTTTAGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGAAAACAGATTATTGAAGATAACTCAAGTGGTCATAGGAAAAAGAAAAG
TGGGTTAAAGGAGGGAAAAGAGGAGTTGGGAAAGGTGTATGAATGCAGGTTTTGTTCACTCAAGTTCTGCAAATCACAGGCTCTTGGTGGCCACATGAACCGCCACCGCC
AAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCTCCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATG
GCACCGGCAAACTACCACACTGCCGGCGGCAGTGGCGGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGGTCGTCTCCAAGCACGCT
TCTGCCGCAGCCGCCACCACCACCGCTACCTTCTTCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCTTCTAGTTTCCCTTCCTACTATCCTCCTCCACAAGCCT
CGATCAACGACTACTATGTGGGACATGTCTTGGGGAACCTTCACAATGCAGCCATCAGACAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTGTCTGTTTCATCATGCGATCCGAGGGGAGTCCTTTAGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGAAAACAGATTATTGAAGATAACTCAAGTGGT
CATAGGAAAAAGAAAAGTGGGTTAAAGGAGGGAAAAGAGGAGTTGGGAAAGGTGTATGAATGCAGGTTTTGTTCACTCAAGTTCTGCAAATCACAGGCTCTTGGTGGCCA
CATGAACCGCCACCGCCAAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCTCCTCCTCCTCCTCATTTAG
GGTGCTGCCATTCAATGGCACCGGCAAACTACCACACTGCCGGCGGCAGTGGCGGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGG
TCGTCTCCAAGCACGCTTCTGCCGCAGCCGCCACCACCACCGCTACCTTCTTCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCTTCTAGTTTCCCTTCCTACTA
TCCTCCTCCACAAGCCTCGATCAACGACTACTATGTGGGACATGTCTTGGGGAACCTTCACAATGCAGCCATCAGACAGTGAACTACGGTTCTAGCTCGGTGGATTCGAG
TAGCTACACTTGCATCGGAGCTCCGGTAGGACATGCTGCAGCAGGATTCGGTGGACGAGATGGTGGTGGGAGTGGCGGTAGAGATGGATCACAGCAGCAGCAGCGCTTGG
ACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTTTGTTTTAAAATTTTTCTGAGTCATGTATTTGAAATTCTGCAATGAC
ACGCCACCCAGAGAAAGAGAGAGAGACATAACAAACTGACAAATGGGG
Protein sequenceShow/hide protein sequence
MRSEGSPLDLNNLPEDYIRDGKQIIEDNSSGHRKKKSGLKEGKEELGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSM
APANYHTAGGSGGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNLHNAAIRQ