; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0026189 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0026189
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr08:11242453..11242620
RNA-Seq ExpressionPI0026189
SyntenyPI0026189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025165.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.6e-0861.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKS-FNKG-----RVALLKELRSCNAILNTGTVG
        +ELIKDYDCTI YHPGK NV+ DALSRKS  +K      RVALL ELRS  A++ T   G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKS-FNKG-----RVALLKELRSCNAILNTGTVG

KAA0035002.1 polyprotein [Cucumis melo var. makuwa]5.2e-0959.65Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        MELIKD+DCTI YH  K NVV D LSRKSF   + GR+ALL+ELR   + +++G+VG
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

KAA0054749.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-1066.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSFN---KGRVALLKELRSCNAILNTGTVG
        MELIKDY+ TIAYHPGK NVV +ALSRK+ +   KGR+A +KELR C  ILNTG  G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSFN---KGRVALLKELRSCNAILNTGTVG

KAA0059914.1 CCHC-type integrase [Cucumis melo var. makuwa]2.1e-1066.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        MELIKDYDCTI YH GK NV  DALSRKS    NKG++ALL ELR C  ILN   +G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

KAA0067194.1 polyprotein [Cucumis melo var. makuwa]1.1e-1168.42Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        M+LIKDYDCTIAY+P KVNV+ DALSRKS    NKGR+ALLK+LR    +LN GT G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

TrEMBL top hitse value%identityAlignment
A0A5A7SL18 DNA/RNA polymerases superfamily protein1.3e-0861.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKS-FNKG-----RVALLKELRSCNAILNTGTVG
        +ELIKDYDCTI YHPGK NV+ DALSRKS  +K      RVALL ELRS  A++ T   G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKS-FNKG-----RVALLKELRSCNAILNTGTVG

A0A5A7SUU4 Polyprotein2.5e-0959.65Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        MELIKD+DCTI YH  K NVV D LSRKSF   + GR+ALL+ELR   + +++G+VG
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

A0A5A7UMR3 DNA/RNA polymerases superfamily protein6.0e-1166.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSFN---KGRVALLKELRSCNAILNTGTVG
        MELIKDY+ TIAYHPGK NVV +ALSRK+ +   KGR+A +KELR C  ILNTG  G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSFN---KGRVALLKELRSCNAILNTGTVG

A0A5A7VIK8 Polyprotein5.4e-1268.42Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        M+LIKDYDCTIAY+P KVNV+ DALSRKS    NKGR+ALLK+LR    +LN GT G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

A0A5D3DMM3 CCHC-type integrase1.0e-1066.67Show/hide
Query:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG
        MELIKDYDCTI YH GK NV  DALSRKS    NKG++ALL ELR C  ILN   +G
Subjt:  MELIKDYDCTIAYHPGKVNVVVDALSRKSF---NKGRVALLKELRSCNAILNTGTVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCATTAAAGATTATGATTGCACTATCGCATATCACCCTGGAAAAGTTAACGTGGTAGTGGATGCATTGAGCAGAAAGAGCTTCAATAAGGGAAGAGTAGCCTT
GCTGAAGGAACTAAGAAGTTGCAATGCGATTTTAAACACGGGAACTGTGGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCATTAAAGATTATGATTGCACTATCGCATATCACCCTGGAAAAGTTAACGTGGTAGTGGATGCATTGAGCAGAAAGAGCTTCAATAAGGGAAGAGTAGCCTT
GCTGAAGGAACTAAGAAGTTGCAATGCGATTTTAAACACGGGAACTGTGGGAATTTGA
Protein sequenceShow/hide protein sequence
MELIKDYDCTIAYHPGKVNVVVDALSRKSFNKGRVALLKELRSCNAILNTGTVGI